Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048153
CDS Infomation

pacid=37464340 polypeptide=PGSC0003DMP400032614 locus=PGSC0003DMG401018708 ID=PGSC0003DMT400048153.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAAGACAAAAGAATGTGAGTTTGGTTTTGGCAGTTAATGGAGAGAGATTTGAG
TTGCCATGTGTTGATCCTTCTACAACTCTGCTTCAGTTCTTGCGCTCTGAGACTTGTTTC
AAGAGTCCCAAGCTTGGTTGTGGTGAAGGTGGTTGTGGAGCTTGTGTCGTTCTGGTGTCG
AAGTATGATCCCAATCTTGAAAAGGTTGAAGATTTTAGCGTGAGTTCGTGTCTTACACTT
CTTTGCAGTTTAAATGGTTGTTCAATTACGACAAGTGAAGGCCTTGGGAACACCAGAGAT
GGTTTTCACTCTATTCATGAAAGATTTGCCGGTTTCCATGCTTCTCAATGCGGCTTTTGC
ACTCCTGGCATGTGTATGTCATTTTTCTCAGCTCTCGTTAATGCCGATAAAGGAAACAAA
CCCAATCCTCCACCAGGATTCTCTAAGCTTACTTCATCTGAAGCTGAAAAGGCCATCACA
GGGAACCTTTGTCGATGCACTGGATACCGGCCCATTGCTGATGCCTGCAAGAGTTTTGCT
GCTGATGTTGATATAGAGGATTTGGGGTTCAATTCTTTTTGGAAAAAGGGAGATTCCAAT
GAAGTGAAAGTAAGTAAGTTACCTCCCTATGACCCAACCAAGAATTTTAGTACATATCCT
GAGTTCTTGAAAAGTGAATCCACTACGAATTCGGACTCCTCAAGGAGGTACCCTTGGTAC
AGTCCTGTTTCCATTGAGGAGCTACGGAGCTTGTTGTACCCCAATGTTATGGAAAATGGT
GCAAGCTTTAAACTTGTCGTTGGAAATACCGGCACAGGTTATTATAAGGAAACTCAGCCA
TATGATCATTATGTTGATCTCAGGTACATTCCTGAATCCTCAATCATCGAAAGAGATCAG
AATGGAATTGAAGTTGGAGCAACCGTGACTATCTCTAAACTCATTTCATTCTTGAAAGAG
GAAAACAAAGTCAATCTTGGTTCATACGGGACGTTGGTGTCCCAAAAACTAGCTAACCAC
ATGGAGAAGATTGCTTCACCATTTGTTCGAAACTCTGCTAGTGTGGGAGGAAATTTGGTT
ATGGCACAGAAGAATGGTTTTCCTTCAGATATTGCTACATTATTTCTTGGACTTGGTGCT
ACTGTTAGATTGATGACCAGTCATGGATTTGAAAAGCTCACATGGGAGGAGTTATTATCG
AGACCACCGCTAGACTCAAAGACTGTGCTTCTAAGTGTTTGCATCCCATTTAAGAATGCT
CAAAGTTCTCTCCAAACTCACTCTAAATTGTTGTTTGATACCTTTCGAGCTTCTCCACGA
CCTCATGGGAATGCATTGGCATATGTAAACGCTGCTTTCCATGCTGATGTTTCTCACTGC
AAGAACGGCGTCCTGATAAACAATATCCAATTGGCGTTTGGTGCTTATGGCACAAAACAT
GCAACAAGGGCTAAAAAAGTAGAGGAATATCTAGACGGGAAGATATTAAATGTACATGTT
TTATATGAAGCACTTAAATTAGTCAAACTAGCAGTGATACCGGAAGATGGCACTTTACAC
CCCGAGTACAGATCAAGCTTGGCTGTCAGTTATGTTTTCGAGTTTCTTTATCCCTTCACT
GATGTTCATTCTGCTATTTCTGGTGGTTTACTCAGTGGAATTAGTGACATCTCAGTTGAG
GAATTTTCCAAAAGTTGTAATGATGGTCGCATTAGTCAGGGGAGAGAACAAACACTACTG
TCTTCTGCTAAGCAAGTCGTGGAATATTCAAGCACCGAGTACTATCCAGTCGGTGAACCG
ATGAAGAAGGTTGGAGCTGCCATGCAAGCTGCTGGTGAAGCTGTTTATGTAGATGACATT
CCTTCACCACCAAACTGCCTGCATGGATCATTTATCTATAGTACAAAACCATTAGCAGGT
GTAAATGGAATCCAACTCGACTCAAATCGATTAACAGATGGAGTCACTACTGTTATTACT
TTTAAAGATATCCCAAGCGGAGGGGAAAATATAGGAGTTCTTACAAATTTTGGTACCGAG
CCCTTATTTGCAGATGATCTCACCCGATATGCTGGCGACAGAATTGCTGTTGTGGTTGCT
GACAGTCAGAGGTCTGCTGATGTGGCGGCAAGAACAGCCCTCGTTGAATACGACACTGAA
AATATAGATTCTCCCATCTTAACCGTTGAGGAGGCTGTTGAGAAATCTAGCTTTTTCCAA
ATCCCACCAGGTCTATATCCAAAACAGGTCGGTGATTTCTCCAAAGGAATGGCTGAGGCT
GATCACAAGATTCTCTCTGCTGAGATAAGGCTTGGTTCCGAATACTATTTTTATATGGAG
ACACAGACTGCCCTTGCAATTCCAGATGAAGACAACTGCATGGTTGTTTATACTTCAAGT
CAGTACCCTGAGTATTCGCATCGTGTTATTGCCAGTTGTCTTGGTGTTCCCGAACACAAT
ATCCGTGTAATTACAAGAAGGGTTGGAGGTGGCTATGGGGGCAAGGCAATCAGAGCAATG
CCTGTTTCCGCAGCCTGTGCACTAGCAGCATACAAGTTAAGACGACCTGTCAGGATATAC
GTCAACCGGAACAGTGACATGATAATGACAGGAGGACGACACCCGATGAAAGTAACGTAC
AGTGTAGGATTCAAATCGAGCGGAAAGATCACAGCATTACATCTTGATATATTGATAAAT
GCCGGGATCACGGAAGATGTAAGCCCCATTGTACCATCAAATGTGATAAAAGCACTAAAA
AAATATGATTGGGGTGCCTTATCTTTCAATGTAAAACTGTGCAAGACAAATCTTACCAGC
AAATCAGCTATGCGGGCCCCTGGGGAAGTGCAAGGATCTTATATAGCCGAAGCTATAATG
GAGCACGTAGCAGGTTTACTCTCGTTGGAGGTGGACTCAGTCAGAAACAAAAATTTTCAT
ACATTTGAAAGCCTTCATTTATTCTATGGTAACATTGTAGCAGAAGGAGAATATACATTG
CCTAGTATCATGGATAAGTTGGCAGTGTCGTCGAGCTTTTTCCAACGAAGCAAGATGATA
GAACAGTTCAACCAGAATAACACATGGAAGAAAAAGGGTATTTCTCGAGTGCCCATCGTG
TATGAAGTTATGCAACGACCAACCTCAGGAAAAGTCAGTATTCTGCAAGATGGATCGATC
GTAGTAGAGGTTGGAGGGATTGAAATTGGCCAAGGGCTATGGACAAAGGTTAGACAGATG
ACTGCCTATGCTCTTGGTTTAATTGATAGTAGTTGGGCCGAAGACCTCGTGGAGAAAGTA
CGAGTCATACAAGCAGACACCTTAAGCTTAGTGCAAGCCGGGTTTACAGCTGGAAGCACT
ACATCAGAATCAAGCTGTGAAGCTGTTAGACTTTGCTGTGATGTATTGGTTGAAAGACTG
ACCCCTTTGAAGAAACAGCTGCAGGAACAAAATGGCTCTGTTGATTGGCCAATGCTGATT
CGCCAGGCACAAACGCAATCAGTAAACTTAGCAGCAAATTCTTATTATGTACCAGAATCC
GGTTCCATGAGTTATTTGAACTTTGGCGGTGCTGTCAGTGAGGTGGAGATTGATATTCTG
ACTGGAGAGACTGCCATTTTGCAGTCAGATATTATTTACGACTGTGGGCAGAGCTTGAAT
CCAGCCGTTGATTTGGGACAGATTGAAGGGGCTTTCGTACAAGGAATTGGATTTTTCATG
CACGAAGAATATCTCACCAACGAAGACGGGCTAATGGTCTCGAATAGCACTTGGAAATAC
AAGATCCCGACAATAGACACTATACCTCAGAATTTCAATGTTCATGTGCTAAACAGTGGA
CATCATCAAAAACGTGTTCTCTCGTCTAAAGCATCTGGTGAACCGCCACTGCTTCTGGCA
GCTTCGGTCCACTGTGCAACAAGAGCAGCTGTTAAAGCAGCACGCGAACAGCTCAAACTA
TGGGGCAAGCTTGACGGGTCTGTTTCAGAATTCTATCTGGACATCCCCGCCATAATACCC
GTTGTGAAGACACAGTGTGGCCTGGATTATGTGGAGAAATATTTGGAAAGTATCTTGGCT
CAGAAATCTAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400032614
PEP Infomation

pacid=37464340 transcript=PGSC0003DMT400048153 locus=PGSC0003DMG401018708 ID=PGSC0003DMT400048153.v4.03 annot-version=v4.03
Sequence

MEERQKNVSLVLAVNGERFELPCVDPSTTLLQFLRSETCFKSPKLGCGEGGCGACVVLVS
KYDPNLEKVEDFSVSSCLTLLCSLNGCSITTSEGLGNTRDGFHSIHERFAGFHASQCGFC
TPGMCMSFFSALVNADKGNKPNPPPGFSKLTSSEAEKAITGNLCRCTGYRPIADACKSFA
ADVDIEDLGFNSFWKKGDSNEVKVSKLPPYDPTKNFSTYPEFLKSESTTNSDSSRRYPWY
SPVSIEELRSLLYPNVMENGASFKLVVGNTGTGYYKETQPYDHYVDLRYIPESSIIERDQ
NGIEVGATVTISKLISFLKEENKVNLGSYGTLVSQKLANHMEKIASPFVRNSASVGGNLV
MAQKNGFPSDIATLFLGLGATVRLMTSHGFEKLTWEELLSRPPLDSKTVLLSVCIPFKNA
QSSLQTHSKLLFDTFRASPRPHGNALAYVNAAFHADVSHCKNGVLINNIQLAFGAYGTKH
ATRAKKVEEYLDGKILNVHVLYEALKLVKLAVIPEDGTLHPEYRSSLAVSYVFEFLYPFT
DVHSAISGGLLSGISDISVEEFSKSCNDGRISQGREQTLLSSAKQVVEYSSTEYYPVGEP
MKKVGAAMQAAGEAVYVDDIPSPPNCLHGSFIYSTKPLAGVNGIQLDSNRLTDGVTTVIT
FKDIPSGGENIGVLTNFGTEPLFADDLTRYAGDRIAVVVADSQRSADVAARTALVEYDTE
NIDSPILTVEEAVEKSSFFQIPPGLYPKQVGDFSKGMAEADHKILSAEIRLGSEYYFYME
TQTALAIPDEDNCMVVYTSSQYPEYSHRVIASCLGVPEHNIRVITRRVGGGYGGKAIRAM
PVSAACALAAYKLRRPVRIYVNRNSDMIMTGGRHPMKVTYSVGFKSSGKITALHLDILIN
AGITEDVSPIVPSNVIKALKKYDWGALSFNVKLCKTNLTSKSAMRAPGEVQGSYIAEAIM
EHVAGLLSLEVDSVRNKNFHTFESLHLFYGNIVAEGEYTLPSIMDKLAVSSSFFQRSKMI
EQFNQNNTWKKKGISRVPIVYEVMQRPTSGKVSILQDGSIVVEVGGIEIGQGLWTKVRQM
TAYALGLIDSSWAEDLVEKVRVIQADTLSLVQAGFTAGSTTSESSCEAVRLCCDVLVERL
TPLKKQLQEQNGSVDWPMLIRQAQTQSVNLAANSYYVPESGSMSYLNFGGAVSEVEIDIL
TGETAILQSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMHEEYLTNEDGLMVSNSTWKY
KIPTIDTIPQNFNVHVLNSGHHQKRVLSSKASGEPPLLLAASVHCATRAAVKAAREQLKL
WGKLDGSVSEFYLDIPAIIPVVKTQCGLDYVEKYLESILAQKSN*

Transcript Sequence

Transcript ID

PGSC0003DMT400048153
Transcript Infomation

pacid=37464340 locus=PGSC0003DMG401018708 ID=PGSC0003DMT400048153.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAAGACAAAAGAATGTGAGTTTGGTTTTGGCAGTTAATGGAGAGAGATTTGAG
TTGCCATGTGTTGATCCTTCTACAACTCTGCTTCAGTTCTTGCGCTCTGAGACTTGTTTC
AAGAGTCCCAAGCTTGGTTGTGGTGAAGGTGGTTGTGGAGCTTGTGTCGTTCTGGTGTCG
AAGTATGATCCCAATCTTGAAAAGGTTGAAGATTTTAGCGTGAGTTCGTGTCTTACACTT
CTTTGCAGTTTAAATGGTTGTTCAATTACGACAAGTGAAGGCCTTGGGAACACCAGAGAT
GGTTTTCACTCTATTCATGAAAGATTTGCCGGTTTCCATGCTTCTCAATGCGGCTTTTGC
ACTCCTGGCATGTGTATGTCATTTTTCTCAGCTCTCGTTAATGCCGATAAAGGAAACAAA
CCCAATCCTCCACCAGGATTCTCTAAGCTTACTTCATCTGAAGCTGAAAAGGCCATCACA
GGGAACCTTTGTCGATGCACTGGATACCGGCCCATTGCTGATGCCTGCAAGAGTTTTGCT
GCTGATGTTGATATAGAGGATTTGGGGTTCAATTCTTTTTGGAAAAAGGGAGATTCCAAT
GAAGTGAAAGTAAGTAAGTTACCTCCCTATGACCCAACCAAGAATTTTAGTACATATCCT
GAGTTCTTGAAAAGTGAATCCACTACGAATTCGGACTCCTCAAGGAGGTACCCTTGGTAC
AGTCCTGTTTCCATTGAGGAGCTACGGAGCTTGTTGTACCCCAATGTTATGGAAAATGGT
GCAAGCTTTAAACTTGTCGTTGGAAATACCGGCACAGGTTATTATAAGGAAACTCAGCCA
TATGATCATTATGTTGATCTCAGGTACATTCCTGAATCCTCAATCATCGAAAGAGATCAG
AATGGAATTGAAGTTGGAGCAACCGTGACTATCTCTAAACTCATTTCATTCTTGAAAGAG
GAAAACAAAGTCAATCTTGGTTCATACGGGACGTTGGTGTCCCAAAAACTAGCTAACCAC
ATGGAGAAGATTGCTTCACCATTTGTTCGAAACTCTGCTAGTGTGGGAGGAAATTTGGTT
ATGGCACAGAAGAATGGTTTTCCTTCAGATATTGCTACATTATTTCTTGGACTTGGTGCT
ACTGTTAGATTGATGACCAGTCATGGATTTGAAAAGCTCACATGGGAGGAGTTATTATCG
AGACCACCGCTAGACTCAAAGACTGTGCTTCTAAGTGTTTGCATCCCATTTAAGAATGCT
CAAAGTTCTCTCCAAACTCACTCTAAATTGTTGTTTGATACCTTTCGAGCTTCTCCACGA
CCTCATGGGAATGCATTGGCATATGTAAACGCTGCTTTCCATGCTGATGTTTCTCACTGC
AAGAACGGCGTCCTGATAAACAATATCCAATTGGCGTTTGGTGCTTATGGCACAAAACAT
GCAACAAGGGCTAAAAAAGTAGAGGAATATCTAGACGGGAAGATATTAAATGTACATGTT
TTATATGAAGCACTTAAATTAGTCAAACTAGCAGTGATACCGGAAGATGGCACTTTACAC
CCCGAGTACAGATCAAGCTTGGCTGTCAGTTATGTTTTCGAGTTTCTTTATCCCTTCACT
GATGTTCATTCTGCTATTTCTGGTGGTTTACTCAGTGGAATTAGTGACATCTCAGTTGAG
GAATTTTCCAAAAGTTGTAATGATGGTCGCATTAGTCAGGGGAGAGAACAAACACTACTG
TCTTCTGCTAAGCAAGTCGTGGAATATTCAAGCACCGAGTACTATCCAGTCGGTGAACCG
ATGAAGAAGGTTGGAGCTGCCATGCAAGCTGCTGGTGAAGCTGTTTATGTAGATGACATT
CCTTCACCACCAAACTGCCTGCATGGATCATTTATCTATAGTACAAAACCATTAGCAGGT
GTAAATGGAATCCAACTCGACTCAAATCGATTAACAGATGGAGTCACTACTGTTATTACT
TTTAAAGATATCCCAAGCGGAGGGGAAAATATAGGAGTTCTTACAAATTTTGGTACCGAG
CCCTTATTTGCAGATGATCTCACCCGATATGCTGGCGACAGAATTGCTGTTGTGGTTGCT
GACAGTCAGAGGTCTGCTGATGTGGCGGCAAGAACAGCCCTCGTTGAATACGACACTGAA
AATATAGATTCTCCCATCTTAACCGTTGAGGAGGCTGTTGAGAAATCTAGCTTTTTCCAA
ATCCCACCAGGTCTATATCCAAAACAGGTCGGTGATTTCTCCAAAGGAATGGCTGAGGCT
GATCACAAGATTCTCTCTGCTGAGATAAGGCTTGGTTCCGAATACTATTTTTATATGGAG
ACACAGACTGCCCTTGCAATTCCAGATGAAGACAACTGCATGGTTGTTTATACTTCAAGT
CAGTACCCTGAGTATTCGCATCGTGTTATTGCCAGTTGTCTTGGTGTTCCCGAACACAAT
ATCCGTGTAATTACAAGAAGGGTTGGAGGTGGCTATGGGGGCAAGGCAATCAGAGCAATG
CCTGTTTCCGCAGCCTGTGCACTAGCAGCATACAAGTTAAGACGACCTGTCAGGATATAC
GTCAACCGGAACAGTGACATGATAATGACAGGAGGACGACACCCGATGAAAGTAACGTAC
AGTGTAGGATTCAAATCGAGCGGAAAGATCACAGCATTACATCTTGATATATTGATAAAT
GCCGGGATCACGGAAGATGTAAGCCCCATTGTACCATCAAATGTGATAAAAGCACTAAAA
AAATATGATTGGGGTGCCTTATCTTTCAATGTAAAACTGTGCAAGACAAATCTTACCAGC
AAATCAGCTATGCGGGCCCCTGGGGAAGTGCAAGGATCTTATATAGCCGAAGCTATAATG
GAGCACGTAGCAGGTTTACTCTCGTTGGAGGTGGACTCAGTCAGAAACAAAAATTTTCAT
ACATTTGAAAGCCTTCATTTATTCTATGGTAACATTGTAGCAGAAGGAGAATATACATTG
CCTAGTATCATGGATAAGTTGGCAGTGTCGTCGAGCTTTTTCCAACGAAGCAAGATGATA
GAACAGTTCAACCAGAATAACACATGGAAGAAAAAGGGTATTTCTCGAGTGCCCATCGTG
TATGAAGTTATGCAACGACCAACCTCAGGAAAAGTCAGTATTCTGCAAGATGGATCGATC
GTAGTAGAGGTTGGAGGGATTGAAATTGGCCAAGGGCTATGGACAAAGGTTAGACAGATG
ACTGCCTATGCTCTTGGTTTAATTGATAGTAGTTGGGCCGAAGACCTCGTGGAGAAAGTA
CGAGTCATACAAGCAGACACCTTAAGCTTAGTGCAAGCCGGGTTTACAGCTGGAAGCACT
ACATCAGAATCAAGCTGTGAAGCTGTTAGACTTTGCTGTGATGTATTGGTTGAAAGACTG
ACCCCTTTGAAGAAACAGCTGCAGGAACAAAATGGCTCTGTTGATTGGCCAATGCTGATT
CGCCAGGCACAAACGCAATCAGTAAACTTAGCAGCAAATTCTTATTATGTACCAGAATCC
GGTTCCATGAGTTATTTGAACTTTGGCGGTGCTGTCAGTGAGGTGGAGATTGATATTCTG
ACTGGAGAGACTGCCATTTTGCAGTCAGATATTATTTACGACTGTGGGCAGAGCTTGAAT
CCAGCCGTTGATTTGGGACAGATTGAAGGGGCTTTCGTACAAGGAATTGGATTTTTCATG
CACGAAGAATATCTCACCAACGAAGACGGGCTAATGGTCTCGAATAGCACTTGGAAATAC
AAGATCCCGACAATAGACACTATACCTCAGAATTTCAATGTTCATGTGCTAAACAGTGGA
CATCATCAAAAACGTGTTCTCTCGTCTAAAGCATCTGGTGAACCGCCACTGCTTCTGGCA
GCTTCGGTCCACTGTGCAACAAGAGCAGCTGTTAAAGCAGCACGCGAACAGCTCAAACTA
TGGGGCAAGCTTGACGGGTCTGTTTCAGAATTCTATCTGGACATCCCCGCCATAATACCC
GTTGTGAAGACACAGTGTGGCCTGGATTATGTGGAGAAATATTTGGAAAGTATCTTGGCT
CAGAAATCTAACTAA