Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048145
CDS Infomation

pacid=37464154 polypeptide=PGSC0003DMP400032609 locus=PGSC0003DMG400018706 ID=PGSC0003DMT400048145.v4.03 annot-version=v4.03
Sequence

ATGTCTGTTCTTGCTATTCTCTTCATTTCTCTGATATTATCAAACTTCAGCAACAAAACT
GAGGCAAAAACATTCTCATTTAAAGAAACAACTATTGATGATATTCATAAAGCTTTCAAG
CAAAACAAACTTACATCAAGACAACTTGTTGAGTTCTATCTAAATGAAATCCAGAGATCC
AATCCAATTCTAAAAGGGATCATAGAGGTGAATCCAGATGCACTCATTCTTGCAGATAAA
GCTGATCAAGAACGAAAATCGAACGCGTCTAAATCACTATCTAGGCTACATGGTATCCCA
GTTCTTGTGAAGGACAACATTGCAACAAAAGATAAGCTTAACACAACAGCAGGATCATTA
GCACTTGTCGGTTCGATTGTGCCACAAGATGCTGGTGTTGTCAAGAAGTTGAGGAATGTT
GGTGCTATCATACTTGGCAAGGCAACTATGACTGAATGGGCTGCTTCTAGAGCTACAAAC
TTGCCTAATGGTTGGAATGGTAGACTTGGACAAGCTCTGGATCCTTATGTAGCAAGTGCT
GATCCATCAGGATCAAGCACAGGTTCTGCAACATCAGTAGCAGCAAACATGGTTGCAGTA
GCATTGGGGACAGAAACTGCAGGCTCCATTCTATCTCCGTCAAGTGCTAATTCTGTTGTT
GGAATCAAACCAACTGTTGGCCTCACTAGCAGGGCAGGTGTAATCCCAATTTCACATAGA
CAAGACACTGTAGGGCCAATCTGCAGGACAGTAACTGATGCTGTTGAGGTTCTTGATGTC
ATCGTTGGCTTTGATCGAGATGATTTTCCAGCAACTAAAAAGGCTTCCATTTACATTCCA
CATGGTGGATACCGGCAATTTCTTAAGGCTGATGGGCTCAGAGATAAAAGACTAGGAATT
TCAAAGGACTTTTTTGGTTCCAATGATATAAAAACTTACCAACAGCATTTTAACACCTTA
AGGCAAAAAGGAGCAGTCTTAGTTGATAACCTGGTAATACCTTCCACCGACTTGGTCTAC
AATGCTATTGATGTTGCTCAAAACATAGCACTTTCTGCTGAATTCAAGATGGACCTAAAT
GCATATCTTAAACATTTAGTCCACACTCAAGTTCGATCCTTGGCAGATGTTATAGCCTTC
AACAAGATTTCACCTCCGGAAAAACTCAAAGAATATGGTCAAGATATAATGTTGGAAGCT
GAGAAGACAAATGGAATAAGGAAATTGGAAAGGGAGGCATTGAGGAACATAACAAAAGCA
TGCAAATACGGGTTCGAGAAGATGATGAAAGAAAATAAGATAGACGCTTTGATGTCACCT
GGTGCTGCCATTGCTGGCCATCTCGCGATAGGAGGTTATCCAGGGATCAATGTACCAGCT
GGTTATGATAAAACTGGAACTCCGTTCGGAATTTCATTTGGAGGACTAAAGGGTTCTGAG
CCAACACTTATTGAAATTGCATATGGTTTTGAACAAGCAACACATATCAGGAAGCCCCCT
CCTTCACATCCTCAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400032609
PEP Infomation

pacid=37464154 transcript=PGSC0003DMT400048145 locus=PGSC0003DMG400018706 ID=PGSC0003DMT400048145.v4.03 annot-version=v4.03
Sequence

MSVLAILFISLILSNFSNKTEAKTFSFKETTIDDIHKAFKQNKLTSRQLVEFYLNEIQRS
NPILKGIIEVNPDALILADKADQERKSNASKSLSRLHGIPVLVKDNIATKDKLNTTAGSL
ALVGSIVPQDAGVVKKLRNVGAIILGKATMTEWAASRATNLPNGWNGRLGQALDPYVASA
DPSGSSTGSATSVAANMVAVALGTETAGSILSPSSANSVVGIKPTVGLTSRAGVIPISHR
QDTVGPICRTVTDAVEVLDVIVGFDRDDFPATKKASIYIPHGGYRQFLKADGLRDKRLGI
SKDFFGSNDIKTYQQHFNTLRQKGAVLVDNLVIPSTDLVYNAIDVAQNIALSAEFKMDLN
AYLKHLVHTQVRSLADVIAFNKISPPEKLKEYGQDIMLEAEKTNGIRKLEREALRNITKA
CKYGFEKMMKENKIDALMSPGAAIAGHLAIGGYPGINVPAGYDKTGTPFGISFGGLKGSE
PTLIEIAYGFEQATHIRKPPPSHPQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400048145
Transcript Infomation

pacid=37464154 locus=PGSC0003DMG400018706 ID=PGSC0003DMT400048145.v4.03 annot-version=v4.03
Sequence

ATGTCTGTTCTTGCTATTCTCTTCATTTCTCTGATATTATCAAACTTCAGCAACAAAACT
GAGGCAAAAACATTCTCATTTAAAGAAACAACTATTGATGATATTCATAAAGCTTTCAAG
CAAAACAAACTTACATCAAGACAACTTGTTGAGTTCTATCTAAATGAAATCCAGAGATCC
AATCCAATTCTAAAAGGGATCATAGAGGTGAATCCAGATGCACTCATTCTTGCAGATAAA
GCTGATCAAGAACGAAAATCGAACGCGTCTAAATCACTATCTAGGCTACATGGTATCCCA
GTTCTTGTGAAGGACAACATTGCAACAAAAGATAAGCTTAACACAACAGCAGGATCATTA
GCACTTGTCGGTTCGATTGTGCCACAAGATGCTGGTGTTGTCAAGAAGTTGAGGAATGTT
GGTGCTATCATACTTGGCAAGGCAACTATGACTGAATGGGCTGCTTCTAGAGCTACAAAC
TTGCCTAATGGTTGGAATGGTAGACTTGGACAAGCTCTGGATCCTTATGTAGCAAGTGCT
GATCCATCAGGATCAAGCACAGGTTCTGCAACATCAGTAGCAGCAAACATGGTTGCAGTA
GCATTGGGGACAGAAACTGCAGGCTCCATTCTATCTCCGTCAAGTGCTAATTCTGTTGTT
GGAATCAAACCAACTGTTGGCCTCACTAGCAGGGCAGGTGTAATCCCAATTTCACATAGA
CAAGACACTGTAGGGCCAATCTGCAGGACAGTAACTGATGCTGTTGAGGTTCTTGATGTC
ATCGTTGGCTTTGATCGAGATGATTTTCCAGCAACTAAAAAGGCTTCCATTTACATTCCA
CATGGTGGATACCGGCAATTTCTTAAGGCTGATGGGCTCAGAGATAAAAGACTAGGAATT
TCAAAGGACTTTTTTGGTTCCAATGATATAAAAACTTACCAACAGCATTTTAACACCTTA
AGGCAAAAAGGAGCAGTCTTAGTTGATAACCTGGTAATACCTTCCACCGACTTGGTCTAC
AATGCTATTGATGTTGCTCAAAACATAGCACTTTCTGCTGAATTCAAGATGGACCTAAAT
GCATATCTTAAACATTTAGTCCACACTCAAGTTCGATCCTTGGCAGATGTTATAGCCTTC
AACAAGATTTCACCTCCGGAAAAACTCAAAGAATATGGTCAAGATATAATGTTGGAAGCT
GAGAAGACAAATGGAATAAGGAAATTGGAAAGGGAGGCATTGAGGAACATAACAAAAGCA
TGCAAATACGGGTTCGAGAAGATGATGAAAGAAAATAAGATAGACGCTTTGATGTCACCT
GGTGCTGCCATTGCTGGCCATCTCGCGATAGGAGGTTATCCAGGGATCAATGTACCAGCT
GGTTATGATAAAACTGGAACTCCGTTCGGAATTTCATTTGGAGGACTAAAGGGTTCTGAG
CCAACACTTATTGAAATTGCATATGGTTTTGAACAAGCAACACATATCAGGAAGCCCCCT
CCTTCACATCCTCAATAG