Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048139
CDS Infomation

pacid=37467417 polypeptide=PGSC0003DMP400032605 locus=PGSC0003DMG401018705 ID=PGSC0003DMT400048139.v4.03 annot-version=v4.03
Sequence

ATGACCGAGAAGATTCAAAGGTGCTGCGAGGTTTGTGGCAATCTATCCTTTGACGATGGC
GGTGATGGGTTCTTCTATTGCACTCGTTGCGGCTCTCAAGCAGTTGACATCATGGACACG
GGTGTTGATGATGATGACCTATTCAACGTAGATGGGGGTATGTACTCTACTAGTCAGCGC
CGTCAATATTGCCAGGTCAGTCAACCTGTACCCATATCTCAGGTACAACTCTCCCAGCAT
TTAGAGACTTTGAAAACCTTTGATGACTACGACGAGCGTAATGGAGATGATGGAGTTGGG
CCTGCAGTGCCTAGTGATTTTGGATCATCTCAAATTTCTTTGACTTACACAGACTATTAT
TCAGAAATCCGATTGAGGTATGTTATGGGGTTACAAGCTATGATCCAAATGCAGTGCAAG
ACTCTGGTGGAGAAATTTAATGTAAGCCCCCTGATTGTTGGGCTTGCTGGGCCTATTTGG
TTAAGACTCTTGGCACATGAAAACGTGTTGAGTGATGAATGGGCAGACGATGTCATCCAT
GAATCAGAGTCTCAAACTCAAGGGGAAATAGAACTTTCTCAGCCGACTGGCAGCCAGAAA
ACAGAACCTCACAATTTAATTGGAAAACGGGCAGTAACCATATGGCATAAATCTTTGAGA
AACTTGATTCCATTACCTTGTTCTCTGGCTATCTCTTTTCTTGTCTGTCACGTGGCAAGG
GAAGCTATCTTGCCAACAGACATATTGAAATGGACGTTAGAAGGAAAGCTCCCATATTTT
GCAGCTTTTCTTGAAATAGAGAAGCAGTTGGGACCTCCTTCAAGGTCGTGCCCTATCAGT
ACCAGTCGTATGTTCAGGCCTATCAGAACTGTCACCTTGCAAAAGTTAGAGTCCCTAGCT
GCCTCCATTGCCAGGAAAATAGGCTTGGAATTGCCTTCAGTGAACTTCCATGCTATAGCT
GCCCGTTATCTCAAGCATTTATCGCTTCCTGTTGAGAAAATTCTTCCTCAGGCATGCCAA
GTGTATGAGTGGTCTATGCCTCCAGAGTTGTATTTATCAGATAATGACTCCAGGCTGCCT
TCTCGTGTTTGCGTGATGTCTATACTGATTGTGACAATGAGGATTCTTTATGACCTGAAT
GGCGGAAAATGGGAACTGATTTCATCTTGTTCGAATAATTTAGTGTCTGCTGTTGAGAAT
GGAGCTGGAGAATGTGGTTTCAGTTGCAATGCAAGAGGTGCTGTTACCGAGGAAGACTCA
GCTTCACGTGATTCAGATCCTCATGATAGTACATCAGTTTTGAGTAAAAAATCTAATTAT
GATGCTTCGAAACTATTGAAGATTCTTGAAGAAAAATACAATGAGCTCAGTGATACATAT
GATTTTTCAAAAGATTTACAATCATACCTTCTGTACTGCAAAAATGTGGTTTTCGCTGGA
CTAGAACCTGCTTACGATGATCACGAAGAAGAAAGGATAATAGAAGATTTTTGGGACTTC
TATCAAAGCCATAAGGCTGACAAAGCATCAGAAGATGGGAAAACCGACTCCCACACTTGT
AACCATTTTCACCATAGCGGATCCAGACATGGATCCAACAGCACAACAAAAGAAAACGAG
AACTTTAGGGACGATGGTGATTCAAATGCAGCATTGAGGCAGCTGAAAGCAGATATGAAC
GAGAATCGATTTGTTTATATGCCACCGAGGAAAAATGTGAAGAAGAAAGATGGCTACATC
AGGTATGCTAGAAAGAAAGACGGGGCTTATCTCTACGCTGTACATGCTGATTATTACATA
TTACTTCGATCTTGTGCTAAGGTTGCACAAGTTGATGTTAGGACTATGCATGTTGGAGTA
TTGACCTTTGAGAAAAGATTGGAAATGCTAGAAAAAAGAATAGATTTTTGTTTATGTAAG
AGAATTCCTGATGATTTCTGTGAATTTTGTCGCGATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400032605
PEP Infomation

pacid=37467417 transcript=PGSC0003DMT400048139 locus=PGSC0003DMG401018705 ID=PGSC0003DMT400048139.v4.03 annot-version=v4.03
Sequence

MTEKIQRCCEVCGNLSFDDGGDGFFYCTRCGSQAVDIMDTGVDDDDLFNVDGGMYSTSQR
RQYCQVSQPVPISQVQLSQHLETLKTFDDYDERNGDDGVGPAVPSDFGSSQISLTYTDYY
SEIRLRYVMGLQAMIQMQCKTLVEKFNVSPLIVGLAGPIWLRLLAHENVLSDEWADDVIH
ESESQTQGEIELSQPTGSQKTEPHNLIGKRAVTIWHKSLRNLIPLPCSLAISFLVCHVAR
EAILPTDILKWTLEGKLPYFAAFLEIEKQLGPPSRSCPISTSRMFRPIRTVTLQKLESLA
ASIARKIGLELPSVNFHAIAARYLKHLSLPVEKILPQACQVYEWSMPPELYLSDNDSRLP
SRVCVMSILIVTMRILYDLNGGKWELISSCSNNLVSAVENGAGECGFSCNARGAVTEEDS
ASRDSDPHDSTSVLSKKSNYDASKLLKILEEKYNELSDTYDFSKDLQSYLLYCKNVVFAG
LEPAYDDHEEERIIEDFWDFYQSHKADKASEDGKTDSHTCNHFHHSGSRHGSNSTTKENE
NFRDDGDSNAALRQLKADMNENRFVYMPPRKNVKKKDGYIRYARKKDGAYLYAVHADYYI
LLRSCAKVAQVDVRTMHVGVLTFEKRLEMLEKRIDFCLCKRIPDDFCEFCRD*

Transcript Sequence

Transcript ID

PGSC0003DMT400048139
Transcript Infomation

pacid=37467417 locus=PGSC0003DMG401018705 ID=PGSC0003DMT400048139.v4.03 annot-version=v4.03
Sequence

ATGACCGAGAAGATTCAAAGGTGCTGCGAGGTTTGTGGCAATCTATCCTTTGACGATGGC
GGTGATGGGTTCTTCTATTGCACTCGTTGCGGCTCTCAAGCAGTTGACATCATGGACACG
GGTGTTGATGATGATGACCTATTCAACGTAGATGGGGGTATGTACTCTACTAGTCAGCGC
CGTCAATATTGCCAGGTCAGTCAACCTGTACCCATATCTCAGGTACAACTCTCCCAGCAT
TTAGAGACTTTGAAAACCTTTGATGACTACGACGAGCGTAATGGAGATGATGGAGTTGGG
CCTGCAGTGCCTAGTGATTTTGGATCATCTCAAATTTCTTTGACTTACACAGACTATTAT
TCAGAAATCCGATTGAGGTATGTTATGGGGTTACAAGCTATGATCCAAATGCAGTGCAAG
ACTCTGGTGGAGAAATTTAATGTAAGCCCCCTGATTGTTGGGCTTGCTGGGCCTATTTGG
TTAAGACTCTTGGCACATGAAAACGTGTTGAGTGATGAATGGGCAGACGATGTCATCCAT
GAATCAGAGTCTCAAACTCAAGGGGAAATAGAACTTTCTCAGCCGACTGGCAGCCAGAAA
ACAGAACCTCACAATTTAATTGGAAAACGGGCAGTAACCATATGGCATAAATCTTTGAGA
AACTTGATTCCATTACCTTGTTCTCTGGCTATCTCTTTTCTTGTCTGTCACGTGGCAAGG
GAAGCTATCTTGCCAACAGACATATTGAAATGGACGTTAGAAGGAAAGCTCCCATATTTT
GCAGCTTTTCTTGAAATAGAGAAGCAGTTGGGACCTCCTTCAAGGTCGTGCCCTATCAGT
ACCAGTCGTATGTTCAGGCCTATCAGAACTGTCACCTTGCAAAAGTTAGAGTCCCTAGCT
GCCTCCATTGCCAGGAAAATAGGCTTGGAATTGCCTTCAGTGAACTTCCATGCTATAGCT
GCCCGTTATCTCAAGCATTTATCGCTTCCTGTTGAGAAAATTCTTCCTCAGGCATGCCAA
GTGTATGAGTGGTCTATGCCTCCAGAGTTGTATTTATCAGATAATGACTCCAGGCTGCCT
TCTCGTGTTTGCGTGATGTCTATACTGATTGTGACAATGAGGATTCTTTATGACCTGAAT
GGCGGAAAATGGGAACTGATTTCATCTTGTTCGAATAATTTAGTGTCTGCTGTTGAGAAT
GGAGCTGGAGAATGTGGTTTCAGTTGCAATGCAAGAGGTGCTGTTACCGAGGAAGACTCA
GCTTCACGTGATTCAGATCCTCATGATAGTACATCAGTTTTGAGTAAAAAATCTAATTAT
GATGCTTCGAAACTATTGAAGATTCTTGAAGAAAAATACAATGAGCTCAGTGATACATAT
GATTTTTCAAAAGATTTACAATCATACCTTCTGTACTGCAAAAATGTGGTTTTCGCTGGA
CTAGAACCTGCTTACGATGATCACGAAGAAGAAAGGATAATAGAAGATTTTTGGGACTTC
TATCAAAGCCATAAGGCTGACAAAGCATCAGAAGATGGGAAAACCGACTCCCACACTTGT
AACCATTTTCACCATAGCGGATCCAGACATGGATCCAACAGCACAACAAAAGAAAACGAG
AACTTTAGGGACGATGGTGATTCAAATGCAGCATTGAGGCAGCTGAAAGCAGATATGAAC
GAGAATCGATTTGTTTATATGCCACCGAGGAAAAATGTGAAGAAGAAAGATGGCTACATC
AGGTATGCTAGAAAGAAAGACGGGGCTTATCTCTACGCTGTACATGCTGATTATTACATA
TTACTTCGATCTTGTGCTAAGGTTGCACAAGTTGATGTTAGGACTATGCATGTTGGAGTA
TTGACCTTTGAGAAAAGATTGGAAATGCTAGAAAAAAGAATAGATTTTTGTTTATGTAAG
AGAATTCCTGATGATTTCTGTGAATTTTGTCGCGATTAG