Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048134
CDS Infomation

pacid=37464623 polypeptide=PGSC0003DMP400032600 locus=PGSC0003DMG400018702 ID=PGSC0003DMT400048134.v4.03 annot-version=v4.03
Sequence

ATGCTATCTTTACCAGGGCCAGTTACAAACTGCATGACTGATGCTATTGAAGGACCATCA
GCTGTTAACCCCGAGAAATTCCCACTTGTTGCTGCTCTTGGTAGTGAGTTGAATAGTTCA
TTTCCCGGTGTGGATGAGTTCCTGCAAAGTGTAGAAGACCTAATCATTGTACCGGCAGAA
GGCACCTCTGGAGTATGCCATGGGGTTGACACTAGGACATCTCCATCACTTAGCGTGCAA
CCATCAGTTACTGATGGCACCGGAATGTACACTCATCCAGTTTCATTTCCCGACGTGCAT
GAGTTCCTGCAAGAGGTAGAAGACCTAATCTCTGTACCGGCCGAGGGCACCTCTGGAGCA
TGCCATGGGATTGACACTAGGACATCTCCATCACTTAGCGTGCAACCATCAGTTACTGAT
GGCACCGGAATGTACACTCATCCAGTTTCATTTCCCGACGTGCATGAGTTCCTGCAAGAG
GTAGAAGACCTAATCTCTGTACCGGCCGAGGGCACCTCTGGAGCATGCCATGGGATTGAC
ACTAGGACATCTCCATCACTTAGCTTGCAATCATCAGTTGCTGGTGGCACCAGAATGTAC
GCTCATTCAGTCACTGTACTGGCAGAGGGCACCTCTGGAGTGTGGTGTGGAATTGACACT
AGAACATCTCCATCACTTAGCTTGCAACCATCAGTTGCTGGTGGCACCAGAATGTACCCT
CATCCAGTCAATGTACTGGCAGAGGGCACCTCTGGAGTGAGTCATGGGGTTGACACTAGG
ACATCTCCTTCACTTAGCTTGCAACCATCAGTTGCTGGTGGCTCTAGAATATACCCTCAT
CCAGTCAATGTACCGGCAGAGGGCATCTCTGGAGCGAGCCATGGGGTTGACACTAGGACA
TCTCCATCACTTAGCTTCCAACCATCAGTTGGTGGTGGCACCGGAATGTACACACATCCA
GTCACTGTACGGGCAGAGGGCACCTCTGGAGCGAGGCGTGGGGTTGACACTAGGACATCT
CCATCACTTAGCTTGCAACCATCAGTTGTTGGTGGCACCGGAATGTACACTCATCCAATC
ATTGTACCGGCAGAGGGCACCTCTGGAACGAGGCGTGGGGTTGACACTAGGACATCTCCA
TCACTTAGCTTGCAACCATCAGTTGGTGGTGGCACCGGAATGTACACTCATCCAGTCACT
GTACTGGTAGAGGGCACCTCTGGAGTAAGGTGTGGGATTGACACTAGGACATCTCCATCA
CTTGGCTTGCAACCATCAGTTGCTGGTGGCACGGGAATGTACACTCATGCAGTCAATAAT
GTTGGGTGTGATCTGGAAGAGCTAATGACCAAGCAGTTGGTTGGAGCTAGTCAAGTAGGT
CTTACCATTAACACTGCAAGTTTGCCATCACCAAATGCTGATCATATTGGAGTCCATGGT
TGTAGTGTCGCTAAGAATGGTTTTGTGAGTACCATGGAAGCTCCTGGGGGAGGTTTTTCT
GTTGATTCCATGCAGATACCATCAATTCCTGGCCATATTGGAGGTGGAACTTATCCCTGT
TGGGAACCTAGCAGCAAGGACGACAGTATCTTTGATCTGGAAGACCTATACACAGATCAC
ATGTTTGGTTTTCACAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400032600
PEP Infomation

pacid=37464623 transcript=PGSC0003DMT400048134 locus=PGSC0003DMG400018702 ID=PGSC0003DMT400048134.v4.03 annot-version=v4.03
Sequence

MLSLPGPVTNCMTDAIEGPSAVNPEKFPLVAALGSELNSSFPGVDEFLQSVEDLIIVPAE
GTSGVCHGVDTRTSPSLSVQPSVTDGTGMYTHPVSFPDVHEFLQEVEDLISVPAEGTSGA
CHGIDTRTSPSLSVQPSVTDGTGMYTHPVSFPDVHEFLQEVEDLISVPAEGTSGACHGID
TRTSPSLSLQSSVAGGTRMYAHSVTVLAEGTSGVWCGIDTRTSPSLSLQPSVAGGTRMYP
HPVNVLAEGTSGVSHGVDTRTSPSLSLQPSVAGGSRIYPHPVNVPAEGISGASHGVDTRT
SPSLSFQPSVGGGTGMYTHPVTVRAEGTSGARRGVDTRTSPSLSLQPSVVGGTGMYTHPI
IVPAEGTSGTRRGVDTRTSPSLSLQPSVGGGTGMYTHPVTVLVEGTSGVRCGIDTRTSPS
LGLQPSVAGGTGMYTHAVNNVGCDLEELMTKQLVGASQVGLTINTASLPSPNADHIGVHG
CSVAKNGFVSTMEAPGGGFSVDSMQIPSIPGHIGGGTYPCWEPSSKDDSIFDLEDLYTDH
MFGFHK*

Transcript Sequence

Transcript ID

PGSC0003DMT400048134
Transcript Infomation

pacid=37464623 locus=PGSC0003DMG400018702 ID=PGSC0003DMT400048134.v4.03 annot-version=v4.03
Sequence

ATGCTATCTTTACCAGGGCCAGTTACAAACTGCATGACTGATGCTATTGAAGGACCATCA
GCTGTTAACCCCGAGAAATTCCCACTTGTTGCTGCTCTTGGTAGTGAGTTGAATAGTTCA
TTTCCCGGTGTGGATGAGTTCCTGCAAAGTGTAGAAGACCTAATCATTGTACCGGCAGAA
GGCACCTCTGGAGTATGCCATGGGGTTGACACTAGGACATCTCCATCACTTAGCGTGCAA
CCATCAGTTACTGATGGCACCGGAATGTACACTCATCCAGTTTCATTTCCCGACGTGCAT
GAGTTCCTGCAAGAGGTAGAAGACCTAATCTCTGTACCGGCCGAGGGCACCTCTGGAGCA
TGCCATGGGATTGACACTAGGACATCTCCATCACTTAGCGTGCAACCATCAGTTACTGAT
GGCACCGGAATGTACACTCATCCAGTTTCATTTCCCGACGTGCATGAGTTCCTGCAAGAG
GTAGAAGACCTAATCTCTGTACCGGCCGAGGGCACCTCTGGAGCATGCCATGGGATTGAC
ACTAGGACATCTCCATCACTTAGCTTGCAATCATCAGTTGCTGGTGGCACCAGAATGTAC
GCTCATTCAGTCACTGTACTGGCAGAGGGCACCTCTGGAGTGTGGTGTGGAATTGACACT
AGAACATCTCCATCACTTAGCTTGCAACCATCAGTTGCTGGTGGCACCAGAATGTACCCT
CATCCAGTCAATGTACTGGCAGAGGGCACCTCTGGAGTGAGTCATGGGGTTGACACTAGG
ACATCTCCTTCACTTAGCTTGCAACCATCAGTTGCTGGTGGCTCTAGAATATACCCTCAT
CCAGTCAATGTACCGGCAGAGGGCATCTCTGGAGCGAGCCATGGGGTTGACACTAGGACA
TCTCCATCACTTAGCTTCCAACCATCAGTTGGTGGTGGCACCGGAATGTACACACATCCA
GTCACTGTACGGGCAGAGGGCACCTCTGGAGCGAGGCGTGGGGTTGACACTAGGACATCT
CCATCACTTAGCTTGCAACCATCAGTTGTTGGTGGCACCGGAATGTACACTCATCCAATC
ATTGTACCGGCAGAGGGCACCTCTGGAACGAGGCGTGGGGTTGACACTAGGACATCTCCA
TCACTTAGCTTGCAACCATCAGTTGGTGGTGGCACCGGAATGTACACTCATCCAGTCACT
GTACTGGTAGAGGGCACCTCTGGAGTAAGGTGTGGGATTGACACTAGGACATCTCCATCA
CTTGGCTTGCAACCATCAGTTGCTGGTGGCACGGGAATGTACACTCATGCAGTCAATAAT
GTTGGGTGTGATCTGGAAGAGCTAATGACCAAGCAGTTGGTTGGAGCTAGTCAAGTAGGT
CTTACCATTAACACTGCAAGTTTGCCATCACCAAATGCTGATCATATTGGAGTCCATGGT
TGTAGTGTCGCTAAGAATGGTTTTGTGAGTACCATGGAAGCTCCTGGGGGAGGTTTTTCT
GTTGATTCCATGCAGATACCATCAATTCCTGGCCATATTGGAGGTGGAACTTATCCCTGT
TGGGAACCTAGCAGCAAGGACGACAGTATCTTTGATCTGGAAGACCTATACACAGATCAC
ATGTTTGGTTTTCACAAATAA