Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048101
CDS Infomation

pacid=37461987 polypeptide=PGSC0003DMP400032580 locus=PGSC0003DMG400018689 ID=PGSC0003DMT400048101.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTGCTACAGAGCAAATGGCCGCAGCGGGTTCTTGTAATCAAGAATTGTTCAAT
CCTATTATTAGTATGGGATGGCAATATTCTTTGATTCTTGTGATTTCTCATATTCTTCAG
ATTTTGCTCAGGCCATTAGGACAAGCTTCACCCATTGTTCAAATTCTCGCGGGGTTCTTG
ATGGGTCCCTCGGGGTTTTCGCGAATCAAAGCAGTAGAGGAGTTCTTCATTCAAAGTTAT
AATTCGGGTTACTATGAATTCATGGCGTTAATTTTTAGAACTATAATCATGTTCCTGATT
GGTCTTGAGACGGACTTCCCTTATCTTATGCGCAACATACGCCCTGCAAGCATTATTGCA
TGTGGCAGCAGTTTAGGATGTACTGTCTTTGCAAGTGCTGTCACTTTCTTAGTATTTCAA
GAAACAGCTTCCCATGGTTCTTCATTCATAATGGCCTTAATGATCATAATAACCTTAGCC
AATGCAGCATCACCGATTGTTGTCCGCGTGGCAGCGGACCTTAAGTTTGGAACTTCTGAG
ACTGGCAAGTTGGCTATATCTTCTTCCTTGATAGCCGATGCATATTCGGTGTTTCTATTG
TTTATACTTTCAGAGTTCAAGTCAACTTCAATTGCAAAATGGATCTTTTTCTTTTTTCTC
TATTTTCTTATTGTTGGTGTAGTTATTGTAATCAATATGTATCTAGCTAATTGGTTGAAT
AGGAGGAATAGGAACAAAAAGTACCTTGGAAATACTGAAATATTTATACTTGTAGCGATT
CTCTATATCGCTGCTATGGCTCTCGAACAGCTTGGATTCAGCAGCATTATAGCTTCTTTC
CTCATTGGCTCAATGTTCCCTAGAGGAGGGAAAGCAGCTCGAACTTTGTTGATCAAACTC
ACATATCCAATTCACAATTTCATATTTCCAATCTACTTTGGCAACCATGGTTTCAGGGCA
AATATAACTAAGCTGAAAAATCTGCGTAACTTTATGGTATTCTCTATCCTTATTTTGTCA
AGCATCGGAGGGAAGATTGTTGGAACACTGGCAGCTTGCTTTCACCTAAAGATCCCTTAC
AGAGAGGGGGTGCTTCTTTCTTTTATGATGAATCTAAAAGGTCATGTTGATATTCTAGCA
TTGACGATTGGCTTGGCGAATGACCTTGTTTCGAGCCAGAATTTCTATGACGTGATGATA
GCAACAATTATTGTGAATACATTGATATGGGGACCAATAGTAGCTTTCATGGTGAGAAGA
GAAAGTGATATCATTGGCTACAGGCAAATATATTTTGAATCTCATAATCCAGAAACCGAA
CTACGAATACTTGCTTGTGTGCATAGTCCGCGACCAGTGGCAACTATGCTAGGACTTGTT
GCAGCCTCCAGAGGGCCAAGAGAAGTTCCAATAACCCCTTACTTGATGCATCTCGTTGAG
CTGCCAGGTAAAAAAAAGACTAATTTGATGTACAATCAGCGAGAGGACGATGAACTAAGT
GATGAAGATGATTATGGTGGGAATGATGTTGTTGAGATAAATGATGCCATGGATATGTTC
ACTAGTGAGACAGGGTTATTGGTTCAACAGATTAAAGCTGTGTCTCCGTTTTCACGTATG
CATGCAGATGTTTGTAACACTGCTGAAGACATAAGAGCATCTATCGTTGTCCTTCCTTTC
CACAAACACCAGAGAATCGATGGGAAGCTAGAGAACGGTAAACAAGGCATACGAACTACA
AATCAGAAAGTTCTTCGTCATGCCCCATGTTCAGTTGCCATTCTTATTGACAGGGGACTT
ACAGCCGGGTGCTTAAATCCTTCGGGTTCTGACTCTCTGCAACACATTGCTATCTTATTT
TTTGGCGGACCTGATGATCGTGAAGCATTAGGCTTTAGTAAACGTCTTGGTATGGATCAT
CACGTAAATCTCACCATAATTAGGTTCCTTCCCTCGTCTTCAAGAGGACAAATTTCAGGT
GTCAATATTGCTCACAAAACGGATGATGTCTTGATGGCAATACCAAATGACGAAGTAGAG
AAAGAAACAGATAGCGCAATTTTGGCAGATTTCCATAGCAGGTATGTGGCGACAGGTCAA
GTAGGATATGTGGAAAAGGTTGTAGAAAATGGCGCAGACACAGCGTCTGCGTTGAGAGAC
ATGGCTGAAATGTATTCATTGTTCATAGTAGGGAAGGACGGGAGAGGACATTCAATACTA
ACAACTGGAATGAGTGATTGGGAAGAATGTCCAGAGCTCGGTAAAGTAGGCGATTTTTTG
GCTTCTCCAGAATTCGATATTAGTGGTTCAGTTCTTGTTGTTCAGCAGTATAGACCTTCA
AAGAATGATGACGACGATGACGATGACAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400032580
PEP Infomation

pacid=37461987 transcript=PGSC0003DMT400048101 locus=PGSC0003DMG400018689 ID=PGSC0003DMT400048101.v4.03 annot-version=v4.03
Sequence

MAAATEQMAAAGSCNQELFNPIISMGWQYSLILVISHILQILLRPLGQASPIVQILAGFL
MGPSGFSRIKAVEEFFIQSYNSGYYEFMALIFRTIIMFLIGLETDFPYLMRNIRPASIIA
CGSSLGCTVFASAVTFLVFQETASHGSSFIMALMIIITLANAASPIVVRVAADLKFGTSE
TGKLAISSSLIADAYSVFLLFILSEFKSTSIAKWIFFFFLYFLIVGVVIVINMYLANWLN
RRNRNKKYLGNTEIFILVAILYIAAMALEQLGFSSIIASFLIGSMFPRGGKAARTLLIKL
TYPIHNFIFPIYFGNHGFRANITKLKNLRNFMVFSILILSSIGGKIVGTLAACFHLKIPY
REGVLLSFMMNLKGHVDILALTIGLANDLVSSQNFYDVMIATIIVNTLIWGPIVAFMVRR
ESDIIGYRQIYFESHNPETELRILACVHSPRPVATMLGLVAASRGPREVPITPYLMHLVE
LPGKKKTNLMYNQREDDELSDEDDYGGNDVVEINDAMDMFTSETGLLVQQIKAVSPFSRM
HADVCNTAEDIRASIVVLPFHKHQRIDGKLENGKQGIRTTNQKVLRHAPCSVAILIDRGL
TAGCLNPSGSDSLQHIAILFFGGPDDREALGFSKRLGMDHHVNLTIIRFLPSSSRGQISG
VNIAHKTDDVLMAIPNDEVEKETDSAILADFHSRYVATGQVGYVEKVVENGADTASALRD
MAEMYSLFIVGKDGRGHSILTTGMSDWEECPELGKVGDFLASPEFDISGSVLVVQQYRPS
KNDDDDDDDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400048101
Transcript Infomation

pacid=37461987 locus=PGSC0003DMG400018689 ID=PGSC0003DMT400048101.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTGCTACAGAGCAAATGGCCGCAGCGGGTTCTTGTAATCAAGAATTGTTCAAT
CCTATTATTAGTATGGGATGGCAATATTCTTTGATTCTTGTGATTTCTCATATTCTTCAG
ATTTTGCTCAGGCCATTAGGACAAGCTTCACCCATTGTTCAAATTCTCGCGGGGTTCTTG
ATGGGTCCCTCGGGGTTTTCGCGAATCAAAGCAGTAGAGGAGTTCTTCATTCAAAGTTAT
AATTCGGGTTACTATGAATTCATGGCGTTAATTTTTAGAACTATAATCATGTTCCTGATT
GGTCTTGAGACGGACTTCCCTTATCTTATGCGCAACATACGCCCTGCAAGCATTATTGCA
TGTGGCAGCAGTTTAGGATGTACTGTCTTTGCAAGTGCTGTCACTTTCTTAGTATTTCAA
GAAACAGCTTCCCATGGTTCTTCATTCATAATGGCCTTAATGATCATAATAACCTTAGCC
AATGCAGCATCACCGATTGTTGTCCGCGTGGCAGCGGACCTTAAGTTTGGAACTTCTGAG
ACTGGCAAGTTGGCTATATCTTCTTCCTTGATAGCCGATGCATATTCGGTGTTTCTATTG
TTTATACTTTCAGAGTTCAAGTCAACTTCAATTGCAAAATGGATCTTTTTCTTTTTTCTC
TATTTTCTTATTGTTGGTGTAGTTATTGTAATCAATATGTATCTAGCTAATTGGTTGAAT
AGGAGGAATAGGAACAAAAAGTACCTTGGAAATACTGAAATATTTATACTTGTAGCGATT
CTCTATATCGCTGCTATGGCTCTCGAACAGCTTGGATTCAGCAGCATTATAGCTTCTTTC
CTCATTGGCTCAATGTTCCCTAGAGGAGGGAAAGCAGCTCGAACTTTGTTGATCAAACTC
ACATATCCAATTCACAATTTCATATTTCCAATCTACTTTGGCAACCATGGTTTCAGGGCA
AATATAACTAAGCTGAAAAATCTGCGTAACTTTATGGTATTCTCTATCCTTATTTTGTCA
AGCATCGGAGGGAAGATTGTTGGAACACTGGCAGCTTGCTTTCACCTAAAGATCCCTTAC
AGAGAGGGGGTGCTTCTTTCTTTTATGATGAATCTAAAAGGTCATGTTGATATTCTAGCA
TTGACGATTGGCTTGGCGAATGACCTTGTTTCGAGCCAGAATTTCTATGACGTGATGATA
GCAACAATTATTGTGAATACATTGATATGGGGACCAATAGTAGCTTTCATGGTGAGAAGA
GAAAGTGATATCATTGGCTACAGGCAAATATATTTTGAATCTCATAATCCAGAAACCGAA
CTACGAATACTTGCTTGTGTGCATAGTCCGCGACCAGTGGCAACTATGCTAGGACTTGTT
GCAGCCTCCAGAGGGCCAAGAGAAGTTCCAATAACCCCTTACTTGATGCATCTCGTTGAG
CTGCCAGGTAAAAAAAAGACTAATTTGATGTACAATCAGCGAGAGGACGATGAACTAAGT
GATGAAGATGATTATGGTGGGAATGATGTTGTTGAGATAAATGATGCCATGGATATGTTC
ACTAGTGAGACAGGGTTATTGGTTCAACAGATTAAAGCTGTGTCTCCGTTTTCACGTATG
CATGCAGATGTTTGTAACACTGCTGAAGACATAAGAGCATCTATCGTTGTCCTTCCTTTC
CACAAACACCAGAGAATCGATGGGAAGCTAGAGAACGGTAAACAAGGCATACGAACTACA
AATCAGAAAGTTCTTCGTCATGCCCCATGTTCAGTTGCCATTCTTATTGACAGGGGACTT
ACAGCCGGGTGCTTAAATCCTTCGGGTTCTGACTCTCTGCAACACATTGCTATCTTATTT
TTTGGCGGACCTGATGATCGTGAAGCATTAGGCTTTAGTAAACGTCTTGGTATGGATCAT
CACGTAAATCTCACCATAATTAGGTTCCTTCCCTCGTCTTCAAGAGGACAAATTTCAGGT
GTCAATATTGCTCACAAAACGGATGATGTCTTGATGGCAATACCAAATGACGAAGTAGAG
AAAGAAACAGATAGCGCAATTTTGGCAGATTTCCATAGCAGGTATGTGGCGACAGGTCAA
GTAGGATATGTGGAAAAGGTTGTAGAAAATGGCGCAGACACAGCGTCTGCGTTGAGAGAC
ATGGCTGAAATGTATTCATTGTTCATAGTAGGGAAGGACGGGAGAGGACATTCAATACTA
ACAACTGGAATGAGTGATTGGGAAGAATGTCCAGAGCTCGGTAAAGTAGGCGATTTTTTG
GCTTCTCCAGAATTCGATATTAGTGGTTCAGTTCTTGTTGTTCAGCAGTATAGACCTTCA
AAGAATGATGACGACGATGACGATGACAAATAA