Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048075
CDS Infomation

pacid=37463260 polypeptide=PGSC0003DMP400032562 locus=PGSC0003DMG400018679 ID=PGSC0003DMT400048075.v4.03 annot-version=v4.03
Sequence

ATGGACGTTCGCCGGCGACCTGTAAAACCCCTTTACCCTTCCGAACACATTTCCTCCGGC
GAACCTCTCAAACCCCATAATCAAGATTCCTCTGTTAAAGCTTCAGATGCTCTTCCATTA
CCTTTGTATCTTACAAATGGTTTGTTCTTCACCATGTTTTTCTCTGTCATGTATTTTCTT
CTACACAGATGGCGTGAGAAGATCCGTAATGGAATTCCACTCCACGTGCTTAACTTTTCT
GAATTAGTTGCTATGGTTTCGTTGATCGCTTCGGTTATTTATCTGTTGGGGTTCTTTGGT
ATTGGGTTTGTTCAATCTTTCGTTTCTAAGGGAAATAATGATTCTTGGGACGTTGAAGAT
GAATCCCCAGAACAATTTATTGATAGAACTGTTACACCACCACCTGTTCGACGAAATATC
CCAATGAAATCTGTACCTGTTGCTGAAAAAACTGCTCAGATAATCACACCATTTTCGTCA
GAGGACGATGAGGTGGTTATCAAATCGGTGGTGGAAGGGAGAATACCATCATATTCATTG
GAATCTAAGTTGGGTGACTGTAAAAGAGCTGCTTTTATTCGAAAAGAGGCGTTACAGAGG
AGTTCAGGGAAGTCATTGGAAGGGTTACCATTAGATGGATTTGATTATGAATCAATTCTT
GGACAGTGTTGTGAGATGCCAATTGGGTATATTCAAATACCAGTGGGAATAGCTGGACCT
TTGCTGCTTAATGGGAAAGAGTTTTCTGTGCCAATGGCAACCACAGAAGGATGTTTAGTT
GCTAGTACTAACAGGGGTTGTAAAGCCATTTATGTTTCTGGTGGCGCTACAAGTGTTTTG
TTCAGAGATGCGATGACTAGAGCTCCTGTAGTTAGGTTTGGCAGCGCAAAGAGAGCTGCA
GAGTTGAAGTTCTTCGTCGAGGATCCAATGAATTTTGAGACTCTATCTGTTGTTTTCAAT
AAATCAAGCAGATTTGCTAGATTACAGAACATTCAATGTGCAATAGCTGGAAAGAATCTA
TACATGAGGTTTAGCTGTAGCACTGGTGATGCGATGGGAATGAACATGGTTTCCAAAGGT
GTACAGAACGTTCTTGATTACCTTCAGAATGAGTACCCCGACATGGACATCATCGGCATA
TCTGGGAACTATTGCTCGGACAAGAAACCAGCAGCAGTTAATTGGATTGAGGGGAGAGGA
AAGTCAGTAGTTTGTGAGGCAATCATCAAGGAAGACGTGGTGAAGAAAGTTCTGAAAACT
GAGGTTGCTACTCTAGTTGAGCTGAACATGCTTAAAAACCTTACTGGCTCCGCCATGGCT
GGTGCACTTGGCGGCTTCAACGCCCATGCCAGCAATATTGTCTCAGCTGTATATTTAGCC
ACTGGCCAAGACCCGGCTCAAAATATTGAGAGCTCTCACTGCATCACTATGATGGAGGCT
GTAAATGATGGCAAGGACCTCCATATTTCAGTCACCATGCCTTCAATCGAGGTGGGTACA
GTAGGAGGAGGAACTCAATTAGCATCGCAATCAGCTTGCTTGAACTTATTAGGAGTGAAA
GGTGCCAACAGAGAGGCACCAGGGTCAAATGCAAGGCTCTTGGCCACAATAGTAGCAGGT
TCGGTTCTCGCGGGTGAGCTATCCCTCATGTCAGCTATCTCAGCTGGGCAACTTGTAAAG
AGCCACATGAAATACAATAGATCATGCAAAGATGTCACAAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400032562
PEP Infomation

pacid=37463260 transcript=PGSC0003DMT400048075 locus=PGSC0003DMG400018679 ID=PGSC0003DMT400048075.v4.03 annot-version=v4.03
Sequence

MDVRRRPVKPLYPSEHISSGEPLKPHNQDSSVKASDALPLPLYLTNGLFFTMFFSVMYFL
LHRWREKIRNGIPLHVLNFSELVAMVSLIASVIYLLGFFGIGFVQSFVSKGNNDSWDVED
ESPEQFIDRTVTPPPVRRNIPMKSVPVAEKTAQIITPFSSEDDEVVIKSVVEGRIPSYSL
ESKLGDCKRAAFIRKEALQRSSGKSLEGLPLDGFDYESILGQCCEMPIGYIQIPVGIAGP
LLLNGKEFSVPMATTEGCLVASTNRGCKAIYVSGGATSVLFRDAMTRAPVVRFGSAKRAA
ELKFFVEDPMNFETLSVVFNKSSRFARLQNIQCAIAGKNLYMRFSCSTGDAMGMNMVSKG
VQNVLDYLQNEYPDMDIIGISGNYCSDKKPAAVNWIEGRGKSVVCEAIIKEDVVKKVLKT
EVATLVELNMLKNLTGSAMAGALGGFNAHASNIVSAVYLATGQDPAQNIESSHCITMMEA
VNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANREAPGSNARLLATIVAG
SVLAGELSLMSAISAGQLVKSHMKYNRSCKDVTK*

Transcript Sequence

Transcript ID

PGSC0003DMT400048075
Transcript Infomation

pacid=37463260 locus=PGSC0003DMG400018679 ID=PGSC0003DMT400048075.v4.03 annot-version=v4.03
Sequence

ATGGACGTTCGCCGGCGACCTGTAAAACCCCTTTACCCTTCCGAACACATTTCCTCCGGC
GAACCTCTCAAACCCCATAATCAAGATTCCTCTGTTAAAGCTTCAGATGCTCTTCCATTA
CCTTTGTATCTTACAAATGGTTTGTTCTTCACCATGTTTTTCTCTGTCATGTATTTTCTT
CTACACAGATGGCGTGAGAAGATCCGTAATGGAATTCCACTCCACGTGCTTAACTTTTCT
GAATTAGTTGCTATGGTTTCGTTGATCGCTTCGGTTATTTATCTGTTGGGGTTCTTTGGT
ATTGGGTTTGTTCAATCTTTCGTTTCTAAGGGAAATAATGATTCTTGGGACGTTGAAGAT
GAATCCCCAGAACAATTTATTGATAGAACTGTTACACCACCACCTGTTCGACGAAATATC
CCAATGAAATCTGTACCTGTTGCTGAAAAAACTGCTCAGATAATCACACCATTTTCGTCA
GAGGACGATGAGGTGGTTATCAAATCGGTGGTGGAAGGGAGAATACCATCATATTCATTG
GAATCTAAGTTGGGTGACTGTAAAAGAGCTGCTTTTATTCGAAAAGAGGCGTTACAGAGG
AGTTCAGGGAAGTCATTGGAAGGGTTACCATTAGATGGATTTGATTATGAATCAATTCTT
GGACAGTGTTGTGAGATGCCAATTGGGTATATTCAAATACCAGTGGGAATAGCTGGACCT
TTGCTGCTTAATGGGAAAGAGTTTTCTGTGCCAATGGCAACCACAGAAGGATGTTTAGTT
GCTAGTACTAACAGGGGTTGTAAAGCCATTTATGTTTCTGGTGGCGCTACAAGTGTTTTG
TTCAGAGATGCGATGACTAGAGCTCCTGTAGTTAGGTTTGGCAGCGCAAAGAGAGCTGCA
GAGTTGAAGTTCTTCGTCGAGGATCCAATGAATTTTGAGACTCTATCTGTTGTTTTCAAT
AAATCAAGCAGATTTGCTAGATTACAGAACATTCAATGTGCAATAGCTGGAAAGAATCTA
TACATGAGGTTTAGCTGTAGCACTGGTGATGCGATGGGAATGAACATGGTTTCCAAAGGT
GTACAGAACGTTCTTGATTACCTTCAGAATGAGTACCCCGACATGGACATCATCGGCATA
TCTGGGAACTATTGCTCGGACAAGAAACCAGCAGCAGTTAATTGGATTGAGGGGAGAGGA
AAGTCAGTAGTTTGTGAGGCAATCATCAAGGAAGACGTGGTGAAGAAAGTTCTGAAAACT
GAGGTTGCTACTCTAGTTGAGCTGAACATGCTTAAAAACCTTACTGGCTCCGCCATGGCT
GGTGCACTTGGCGGCTTCAACGCCCATGCCAGCAATATTGTCTCAGCTGTATATTTAGCC
ACTGGCCAAGACCCGGCTCAAAATATTGAGAGCTCTCACTGCATCACTATGATGGAGGCT
GTAAATGATGGCAAGGACCTCCATATTTCAGTCACCATGCCTTCAATCGAGGTGGGTACA
GTAGGAGGAGGAACTCAATTAGCATCGCAATCAGCTTGCTTGAACTTATTAGGAGTGAAA
GGTGCCAACAGAGAGGCACCAGGGTCAAATGCAAGGCTCTTGGCCACAATAGTAGCAGGT
TCGGTTCTCGCGGGTGAGCTATCCCTCATGTCAGCTATCTCAGCTGGGCAACTTGTAAAG
AGCCACATGAAATACAATAGATCATGCAAAGATGTCACAAAGTAA