Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048068
CDS Infomation

pacid=37459680 polypeptide=PGSC0003DMP400032555 locus=PGSC0003DMG400018677 ID=PGSC0003DMT400048068.v4.03 annot-version=v4.03
Sequence

ATGGAATTTTTGACACCAAAAATCTTCATATTTTTCTCTTGTTTTCAACTCATATCACAA
GCCAAAATCATAACATTTGACCAACAATATGGTGACCCTTTTGATCATACATATGTCCCC
CTTCTTGAAATCAAACATCCTGCACAAATAAGCAATCAAGCACTTCAAATCACCCCTGAC
ACAGCTTCCTCTGCTTACCAAATGTTCAATAATTCAGGCAGAATCCTATTAAAACGGCCT
TTCAAACTATGGGTAGACAATGATATTTCAAGGACAGCGTCATTCAACACATCATTCCTA
GTAAACATATATAGACCGGATAACCAAACACCAGCTGAAGGTCTAGCTTTCTTGATATGT
CCAAATTTTGATTTGCCACTAAATAGCCAGGGCCAGTATTTGGGCCTAACGAATGCTACA
ACAGATGGTGAATTATCCAACAAAATAATCGCGATTGAGCTAGATACATTCAAACAAGAT
TTCGATATTGATGATAACCATATTGGGATTGATATAAACAGTGTTAAATCCGTTAAGTCG
GAACCTTTAACACCACATGGAATTGAACTAGCTCCAATAGGTGCTAGATTTTACAATATA
TGGATACACTATGATGGATTCAAGAAAGTACTTGATGTGTACATTATTGAACAAATGACG
AAAAATGGGACAACACCAACAAGGCCAAAAGTACCAATACTAACACACAATGTTGATTTG
AGAGAATTTGTAAAGCAAGAATCATATTTTGGATTTTCAGCTTCAACAGGACATTTCAAT
CAGTTGAATTGTGTGTTGAGATGGAATTTAACAGTTGAGTATTTTCAAGAAAAGAATGAT
CAAGAAAAGGTACTAATAATAAGTCTAAGTGTTGGTGTATCAGTATTGGTTGTTTTATTG
ATTTTGTCAGGGTATTTTGGGTATTTTTTTTATAAGAAAAAAAGGGATGATAGGTCACAA
TCTAATATATTAGGGGCATTAAAGAGTTTACCTGGAATGCCTAGGGATTTTGAGTTTAAA
GAATTGAAAAAAGCTACTAATAATTTTGATGAAAAGAATAAACTTGGTGAAGGTGGATTT
GGAGTTGTGTACAAAGGGTATTTAGTTGGTGAAAATTTGGAAATTGCTGTGAAGTGGTTT
TCTAGGGAAAGTATCAAGGGTCAAGATGATTTCTTGGCTGAGTTGACAATTATCAACCGT
TTAAGGCATAAACATCTTGTCAAATTACTTGGATGGAGCCATAAGCATGGTAAGCTACTA
CTTGTATATGAATACATGCCAAATGGTAGCCTGGACAAACATCTCTTCTCATCAGGGCAA
GAAAAAGAGCCACTCAGCTGGAGTGTGAGGTACAACATTGTATCAGGAGTCGCGTCAGCT
CTGCACTATCTTCACAACGAATACGAGCAGAAGGTAGTCCATCGCGATCTCAAGGCAAAC
AACATCATGCTCGACTCAAACTTCAATGCACGTTTAGGTGATTTTGGATTAGCACGAGCA
ATTGACAACGAAAAGACCTCATATGCTGATGAAGCTGAAGGTGTACTTGGCACGATGGGA
TACATCGCGCCAGAATGCTTCCACACAGGAAAAGCAACTCAACATTCTGATGTCTATGCA
TTCGGAGCTGTGTTGTTGGAGCTAATATGTTGCCAAAGGCCTGGAACTAAAGTTAATGGC
TTTCAACTCTTTCTTGATTGGGTTTGGTTCTTGCATCGCGATGGGAGAATCCTTGAAGCT
GTTGACAAGAGGCTCGAGGATCAATACGTGGTTGAAGAAGCAGAGAGATTGTTACTACTT
GCTCTGGCTTGCTCCCATCCAATTGCCAATGAAAGGCCTAAAACACAAACTATAGTTCAA
GTTATATCAGGATCAGTACCAGCACCACAAGTACCACCATTCAAACCATCATTTGTATGG
CCTTCTATGGTTCCAATTGACATAGATTCATCGAGCATCGTCGATACAATATCCATCACA
ACTCCTCAGTACAGTTCAGAGAACAACAGTATTGAATATCAAAGCAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400032555
PEP Infomation

pacid=37459680 transcript=PGSC0003DMT400048068 locus=PGSC0003DMG400018677 ID=PGSC0003DMT400048068.v4.03 annot-version=v4.03
Sequence

MEFLTPKIFIFFSCFQLISQAKIITFDQQYGDPFDHTYVPLLEIKHPAQISNQALQITPD
TASSAYQMFNNSGRILLKRPFKLWVDNDISRTASFNTSFLVNIYRPDNQTPAEGLAFLIC
PNFDLPLNSQGQYLGLTNATTDGELSNKIIAIELDTFKQDFDIDDNHIGIDINSVKSVKS
EPLTPHGIELAPIGARFYNIWIHYDGFKKVLDVYIIEQMTKNGTTPTRPKVPILTHNVDL
REFVKQESYFGFSASTGHFNQLNCVLRWNLTVEYFQEKNDQEKVLIISLSVGVSVLVVLL
ILSGYFGYFFYKKKRDDRSQSNILGALKSLPGMPRDFEFKELKKATNNFDEKNKLGEGGF
GVVYKGYLVGENLEIAVKWFSRESIKGQDDFLAELTIINRLRHKHLVKLLGWSHKHGKLL
LVYEYMPNGSLDKHLFSSGQEKEPLSWSVRYNIVSGVASALHYLHNEYEQKVVHRDLKAN
NIMLDSNFNARLGDFGLARAIDNEKTSYADEAEGVLGTMGYIAPECFHTGKATQHSDVYA
FGAVLLELICCQRPGTKVNGFQLFLDWVWFLHRDGRILEAVDKRLEDQYVVEEAERLLLL
ALACSHPIANERPKTQTIVQVISGSVPAPQVPPFKPSFVWPSMVPIDIDSSSIVDTISIT
TPQYSSENNSIEYQSK*

Transcript Sequence

Transcript ID

PGSC0003DMT400048068
Transcript Infomation

pacid=37459680 locus=PGSC0003DMG400018677 ID=PGSC0003DMT400048068.v4.03 annot-version=v4.03
Sequence

ATGGAATTTTTGACACCAAAAATCTTCATATTTTTCTCTTGTTTTCAACTCATATCACAA
GCCAAAATCATAACATTTGACCAACAATATGGTGACCCTTTTGATCATACATATGTCCCC
CTTCTTGAAATCAAACATCCTGCACAAATAAGCAATCAAGCACTTCAAATCACCCCTGAC
ACAGCTTCCTCTGCTTACCAAATGTTCAATAATTCAGGCAGAATCCTATTAAAACGGCCT
TTCAAACTATGGGTAGACAATGATATTTCAAGGACAGCGTCATTCAACACATCATTCCTA
GTAAACATATATAGACCGGATAACCAAACACCAGCTGAAGGTCTAGCTTTCTTGATATGT
CCAAATTTTGATTTGCCACTAAATAGCCAGGGCCAGTATTTGGGCCTAACGAATGCTACA
ACAGATGGTGAATTATCCAACAAAATAATCGCGATTGAGCTAGATACATTCAAACAAGAT
TTCGATATTGATGATAACCATATTGGGATTGATATAAACAGTGTTAAATCCGTTAAGTCG
GAACCTTTAACACCACATGGAATTGAACTAGCTCCAATAGGTGCTAGATTTTACAATATA
TGGATACACTATGATGGATTCAAGAAAGTACTTGATGTGTACATTATTGAACAAATGACG
AAAAATGGGACAACACCAACAAGGCCAAAAGTACCAATACTAACACACAATGTTGATTTG
AGAGAATTTGTAAAGCAAGAATCATATTTTGGATTTTCAGCTTCAACAGGACATTTCAAT
CAGTTGAATTGTGTGTTGAGATGGAATTTAACAGTTGAGTATTTTCAAGAAAAGAATGAT
CAAGAAAAGGTACTAATAATAAGTCTAAGTGTTGGTGTATCAGTATTGGTTGTTTTATTG
ATTTTGTCAGGGTATTTTGGGTATTTTTTTTATAAGAAAAAAAGGGATGATAGGTCACAA
TCTAATATATTAGGGGCATTAAAGAGTTTACCTGGAATGCCTAGGGATTTTGAGTTTAAA
GAATTGAAAAAAGCTACTAATAATTTTGATGAAAAGAATAAACTTGGTGAAGGTGGATTT
GGAGTTGTGTACAAAGGGTATTTAGTTGGTGAAAATTTGGAAATTGCTGTGAAGTGGTTT
TCTAGGGAAAGTATCAAGGGTCAAGATGATTTCTTGGCTGAGTTGACAATTATCAACCGT
TTAAGGCATAAACATCTTGTCAAATTACTTGGATGGAGCCATAAGCATGGTAAGCTACTA
CTTGTATATGAATACATGCCAAATGGTAGCCTGGACAAACATCTCTTCTCATCAGGGCAA
GAAAAAGAGCCACTCAGCTGGAGTGTGAGGTACAACATTGTATCAGGAGTCGCGTCAGCT
CTGCACTATCTTCACAACGAATACGAGCAGAAGGTAGTCCATCGCGATCTCAAGGCAAAC
AACATCATGCTCGACTCAAACTTCAATGCACGTTTAGGTGATTTTGGATTAGCACGAGCA
ATTGACAACGAAAAGACCTCATATGCTGATGAAGCTGAAGGTGTACTTGGCACGATGGGA
TACATCGCGCCAGAATGCTTCCACACAGGAAAAGCAACTCAACATTCTGATGTCTATGCA
TTCGGAGCTGTGTTGTTGGAGCTAATATGTTGCCAAAGGCCTGGAACTAAAGTTAATGGC
TTTCAACTCTTTCTTGATTGGGTTTGGTTCTTGCATCGCGATGGGAGAATCCTTGAAGCT
GTTGACAAGAGGCTCGAGGATCAATACGTGGTTGAAGAAGCAGAGAGATTGTTACTACTT
GCTCTGGCTTGCTCCCATCCAATTGCCAATGAAAGGCCTAAAACACAAACTATAGTTCAA
GTTATATCAGGATCAGTACCAGCACCACAAGTACCACCATTCAAACCATCATTTGTATGG
CCTTCTATGGTTCCAATTGACATAGATTCATCGAGCATCGTCGATACAATATCCATCACA
ACTCCTCAGTACAGTTCAGAGAACAACAGTATTGAATATCAAAGCAAGTAG