Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048050
CDS Infomation

pacid=37461350 polypeptide=PGSC0003DMP400032542 locus=PGSC0003DMG400018672 ID=PGSC0003DMT400048050.v4.03 annot-version=v4.03
Sequence

ATGGGGAATTGTTTTGGAGCTAAGCTTTCTAACTCTAAATCTAGTAGTACTTACCCTAGC
TTCTCAGCTAGACCATCTACTCCAGATACATCAAAGAGCTACAGCAATGGCGTTGGCTAT
TCGGCCACGAGTGGCAGTATTGGATGTAGTAATTTCTCAGCAGCTGCAAGTGAAGATACA
TGTTTGAACGGAGAGATATTGCCGATTCCAAATTTGAAGATTTATAGTTTTTCTGATTTG
AAGTTGTCCACGAAGAATTTCAAGCCTGACTCAGTTTTGGGGATTGGCGGTTTTGGGACC
GTGTATAAAGGATGGGTTGATGAGAAGACGCTTACTCCGACTAAACCTGGCACTGGAATG
ATTGTTGCCATCAAGAAGTTGAACTCTGAGAGCACTCAAGGATTTGAAGAGTGGCAGTCA
GAAGTGAACTTTTTAGGAAGGCTTTCACATCCTAACCTTGTTAAACTACTGGGATATTGT
CATGAGGACAAGGAACTGTTACTCGTTTACGAATTTATGCCCAAGGGGAGTTTGGAAAAC
CATCTATTCAGAAGGAGTGCTGCTATTGAACCGCTTTCTTGGGACCTGCGGCTCAAAATT
GCCATAGGAGCAGCACGGGGCTTAGCGTTCTTACATACTTCAGAAAAGAAAGTCATTTAC
AGAGACTTCAAAGCCTCAAACATACTGCTTGATGGGGTAAGGTCTGCTTCCTTGTCATTT
TATTTGGTTAGCGAGTTACGTATTGTGTTACTCATGCATTTGAACATTTATAAGTACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032542
PEP Infomation

pacid=37461350 transcript=PGSC0003DMT400048050 locus=PGSC0003DMG400018672 ID=PGSC0003DMT400048050.v4.03 annot-version=v4.03
Sequence

MGNCFGAKLSNSKSSSTYPSFSARPSTPDTSKSYSNGVGYSATSGSIGCSNFSAAASEDT
CLNGEILPIPNLKIYSFSDLKLSTKNFKPDSVLGIGGFGTVYKGWVDEKTLTPTKPGTGM
IVAIKKLNSESTQGFEEWQSEVNFLGRLSHPNLVKLLGYCHEDKELLLVYEFMPKGSLEN
HLFRRSAAIEPLSWDLRLKIAIGAARGLAFLHTSEKKVIYRDFKASNILLDGVRSASLSF
YLVSELRIVLLMHLNIYKY*

Transcript Sequence

Transcript ID

PGSC0003DMT400048050
Transcript Infomation

pacid=37461350 locus=PGSC0003DMG400018672 ID=PGSC0003DMT400048050.v4.03 annot-version=v4.03
Sequence

ATGGGGAATTGTTTTGGAGCTAAGCTTTCTAACTCTAAATCTAGTAGTACTTACCCTAGC
TTCTCAGCTAGACCATCTACTCCAGATACATCAAAGAGCTACAGCAATGGCGTTGGCTAT
TCGGCCACGAGTGGCAGTATTGGATGTAGTAATTTCTCAGCAGCTGCAAGTGAAGATACA
TGTTTGAACGGAGAGATATTGCCGATTCCAAATTTGAAGATTTATAGTTTTTCTGATTTG
AAGTTGTCCACGAAGAATTTCAAGCCTGACTCAGTTTTGGGGATTGGCGGTTTTGGGACC
GTGTATAAAGGATGGGTTGATGAGAAGACGCTTACTCCGACTAAACCTGGCACTGGAATG
ATTGTTGCCATCAAGAAGTTGAACTCTGAGAGCACTCAAGGATTTGAAGAGTGGCAGTCA
GAAGTGAACTTTTTAGGAAGGCTTTCACATCCTAACCTTGTTAAACTACTGGGATATTGT
CATGAGGACAAGGAACTGTTACTCGTTTACGAATTTATGCCCAAGGGGAGTTTGGAAAAC
CATCTATTCAGAAGGAGTGCTGCTATTGAACCGCTTTCTTGGGACCTGCGGCTCAAAATT
GCCATAGGAGCAGCACGGGGCTTAGCGTTCTTACATACTTCAGAAAAGAAAGTCATTTAC
AGAGACTTCAAAGCCTCAAACATACTGCTTGATGGGGTAAGGTCTGCTTCCTTGTCATTT
TATTTGGTTAGCGAGTTACGTATTGTGTTACTCATGCATTTGAACATTTATAAGTACTGA