Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048038
CDS Infomation

pacid=37460809 polypeptide=PGSC0003DMP400032533 locus=PGSC0003DMG400018666 ID=PGSC0003DMT400048038.v4.03 annot-version=v4.03
Sequence

ATGAGAGGAGCTGTGCTTATTGCACTTGCTGCTGCCATTGGCAACATGTTGCAAGGATGG
GACAATGCAACGATAGCAGGATCTGTTCTTTACATCAAGAAGGAATTTAATTTGCAAACA
CAGCCAACCATGGAAGGGCTAATTGTTGCGATGTCTCTAATTGGAGCAACAGTGATCACA
ACATTCTCGGGACCTGTATCGGACATGCTTGGAAGACGTCCAATGCTTATAATTTCATCA
GTACTTTATTTCCTCAGTGGATTAGTGATGTTATGGGCTCCAAATGTTTATGTGTTGCTT
TTAGCAAGGCTCTTAGATGGATTTGGAATTGGTCTTGCGGTGACACTTGTTCCTGTCTAT
ATATCCGAGACTGCCCCACCAGAAATAAGAGGGCAATTGAATACATTTCCACAGTTCACC
GGTTCTCTCGGAATGTTTTTGTCATACTGCATGGTTTTTGGAATGTCACTGACACAAGCA
CCAAGTTGGAGGCTAATGCTTGGGGTTCTATCAATTCCTTCTCTTGCTTACTTCTTTCTT
ACATTGTTTTACTTACCTGAATCTCCAAGGTGGCTGGTCAGTAAAGGTCGAATGAAGGAG
GCTAAACAAGTTTTACAGAGACTACGTGGCAGGGAAGATGTCTCAGGCGAAATGGCATTG
TTGATGGAAGGTTTAGGTGTTGGAGGTGAAGTATCTATAGAAGAGTATATAATTGGTCCG
GACAATGAACTTGTGGACAACCAGGATGAGAAAGATCAGATCAAGTTATATGGAGCTGAA
GAGGGTCTTTCATGGATAGCAAAACCTGTCACTGGACAAAGTACTCTAGGCCTGGTCTCC
CGTCACGGGAGTATGGCAAACCAAAGCATGCCTCTTATGGATCCGTTGGTTACTCTGTTT
GGCAGTGTTCATGAGAAGATGCCGGAGATGGGAAGCATGCTCTTTTCGAATGTTGGCAGC
ATGTTCAATATCACAGAGAATCAAGGAAAAACTGATAATTGGGATGAAGAAAGCCAAAAG
GATGAGGAAAATCATATGTCTGATGGTTCTGGGGCAGAATCTGATGATAATCTGAGAAGC
CCACTGCTCTCACGTCAAGGTACAAATGCAGAAGGAAATATGGGACCTCCAACATCATTA
AGCATGAGGCAAGGCAGCAATTTCATGCAGGCGAATGGCGTCGGCGAGCAAGCCAGCATG
GGTATTGGTGGTGGTTGGCAGCTAGCATACAGAAAAGATGAGAAAAAGGAAGGAGCACTC
AAAAGGATCTATTTACATGAAGAAGGAGGCAGTGGATCACGACGGGGGTCCATTATTTCT
CTTCCAGGAGATACTCATGCAGATCAAGGTGAATTCATTCATGCTGCTGCTTTAGTGAGT
CAGTCTGTTCTTCGTGCTGAGAGCCTCTTGGGTCAACAGTCTATAGAAGAAGCAATCGAG
ACACAATCTGAAACTGTTACGAAGAAGTCAGTCTGGAAAGCACTTCTTGAGCCAGGAGTC
AAGCATGCACTGATTGTTGGAGTTGGTCTTCAAATACTTCAGCAGTTTTCCGGAATCAAC
GGGGTTCTTTATTACACTCCTCAAATTCTTGAACAAGCAGGCGTAGGAGTTCTGCTATCG
AATATGGGCATTGGTTCAGACTCTGCGTCTTTCCTCATAAGTGCTGTCACAACTTTGTTA
ATGCTTCCCACCATTGGTGTTGCAATGAGACTAATGGACTTGGCTGGCAGAAGGTGGCTT
TTGCTGGCTACATTGCCCGTCTTGTTATCGTCACTTATTGTACTAGTCCTTGGCAATGTT
ATTAACATGGGTGAGGTCATGCACGCTGTGATCTCCACTGTTAGTGTTGTGGTATACTTC
TGCACCTTTGTTATGGGCTTTGGTCCTATCCCAAATATCCTCTGCTCTGAGATATTTCCC
ACCAGCGTTCGTGGAATCTGCATTGCTATATGTGCTCTTACTTTTTGGATCGGAGACATC
ATTGTCACCTACTCGCTCCCCATTATGCTCAACTCCATTGGACTTGGAGGTGTCTTCGCC
ATCTATGCTGTTGTGTGTGCTGTGGCTTGGGTATTCGTCTTCTTGAAAGTTCCTGAAACA
AAGGGCATGCCCCTTGAAGTCATTACAGAGTTCTTCGCCGTTGGAGCTAAGAGAGCTGCC
ACAGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400032533
PEP Infomation

pacid=37460809 transcript=PGSC0003DMT400048038 locus=PGSC0003DMG400018666 ID=PGSC0003DMT400048038.v4.03 annot-version=v4.03
Sequence

MRGAVLIALAAAIGNMLQGWDNATIAGSVLYIKKEFNLQTQPTMEGLIVAMSLIGATVIT
TFSGPVSDMLGRRPMLIISSVLYFLSGLVMLWAPNVYVLLLARLLDGFGIGLAVTLVPVY
ISETAPPEIRGQLNTFPQFTGSLGMFLSYCMVFGMSLTQAPSWRLMLGVLSIPSLAYFFL
TLFYLPESPRWLVSKGRMKEAKQVLQRLRGREDVSGEMALLMEGLGVGGEVSIEEYIIGP
DNELVDNQDEKDQIKLYGAEEGLSWIAKPVTGQSTLGLVSRHGSMANQSMPLMDPLVTLF
GSVHEKMPEMGSMLFSNVGSMFNITENQGKTDNWDEESQKDEENHMSDGSGAESDDNLRS
PLLSRQGTNAEGNMGPPTSLSMRQGSNFMQANGVGEQASMGIGGGWQLAYRKDEKKEGAL
KRIYLHEEGGSGSRRGSIISLPGDTHADQGEFIHAAALVSQSVLRAESLLGQQSIEEAIE
TQSETVTKKSVWKALLEPGVKHALIVGVGLQILQQFSGINGVLYYTPQILEQAGVGVLLS
NMGIGSDSASFLISAVTTLLMLPTIGVAMRLMDLAGRRWLLLATLPVLLSSLIVLVLGNV
INMGEVMHAVISTVSVVVYFCTFVMGFGPIPNILCSEIFPTSVRGICIAICALTFWIGDI
IVTYSLPIMLNSIGLGGVFAIYAVVCAVAWVFVFLKVPETKGMPLEVITEFFAVGAKRAA
TE*

Transcript Sequence

Transcript ID

PGSC0003DMT400048038
Transcript Infomation

pacid=37460809 locus=PGSC0003DMG400018666 ID=PGSC0003DMT400048038.v4.03 annot-version=v4.03
Sequence

ATGAGAGGAGCTGTGCTTATTGCACTTGCTGCTGCCATTGGCAACATGTTGCAAGGATGG
GACAATGCAACGATAGCAGGATCTGTTCTTTACATCAAGAAGGAATTTAATTTGCAAACA
CAGCCAACCATGGAAGGGCTAATTGTTGCGATGTCTCTAATTGGAGCAACAGTGATCACA
ACATTCTCGGGACCTGTATCGGACATGCTTGGAAGACGTCCAATGCTTATAATTTCATCA
GTACTTTATTTCCTCAGTGGATTAGTGATGTTATGGGCTCCAAATGTTTATGTGTTGCTT
TTAGCAAGGCTCTTAGATGGATTTGGAATTGGTCTTGCGGTGACACTTGTTCCTGTCTAT
ATATCCGAGACTGCCCCACCAGAAATAAGAGGGCAATTGAATACATTTCCACAGTTCACC
GGTTCTCTCGGAATGTTTTTGTCATACTGCATGGTTTTTGGAATGTCACTGACACAAGCA
CCAAGTTGGAGGCTAATGCTTGGGGTTCTATCAATTCCTTCTCTTGCTTACTTCTTTCTT
ACATTGTTTTACTTACCTGAATCTCCAAGGTGGCTGGTCAGTAAAGGTCGAATGAAGGAG
GCTAAACAAGTTTTACAGAGACTACGTGGCAGGGAAGATGTCTCAGGCGAAATGGCATTG
TTGATGGAAGGTTTAGGTGTTGGAGGTGAAGTATCTATAGAAGAGTATATAATTGGTCCG
GACAATGAACTTGTGGACAACCAGGATGAGAAAGATCAGATCAAGTTATATGGAGCTGAA
GAGGGTCTTTCATGGATAGCAAAACCTGTCACTGGACAAAGTACTCTAGGCCTGGTCTCC
CGTCACGGGAGTATGGCAAACCAAAGCATGCCTCTTATGGATCCGTTGGTTACTCTGTTT
GGCAGTGTTCATGAGAAGATGCCGGAGATGGGAAGCATGCTCTTTTCGAATGTTGGCAGC
ATGTTCAATATCACAGAGAATCAAGGAAAAACTGATAATTGGGATGAAGAAAGCCAAAAG
GATGAGGAAAATCATATGTCTGATGGTTCTGGGGCAGAATCTGATGATAATCTGAGAAGC
CCACTGCTCTCACGTCAAGGTACAAATGCAGAAGGAAATATGGGACCTCCAACATCATTA
AGCATGAGGCAAGGCAGCAATTTCATGCAGGCGAATGGCGTCGGCGAGCAAGCCAGCATG
GGTATTGGTGGTGGTTGGCAGCTAGCATACAGAAAAGATGAGAAAAAGGAAGGAGCACTC
AAAAGGATCTATTTACATGAAGAAGGAGGCAGTGGATCACGACGGGGGTCCATTATTTCT
CTTCCAGGAGATACTCATGCAGATCAAGGTGAATTCATTCATGCTGCTGCTTTAGTGAGT
CAGTCTGTTCTTCGTGCTGAGAGCCTCTTGGGTCAACAGTCTATAGAAGAAGCAATCGAG
ACACAATCTGAAACTGTTACGAAGAAGTCAGTCTGGAAAGCACTTCTTGAGCCAGGAGTC
AAGCATGCACTGATTGTTGGAGTTGGTCTTCAAATACTTCAGCAGTTTTCCGGAATCAAC
GGGGTTCTTTATTACACTCCTCAAATTCTTGAACAAGCAGGCGTAGGAGTTCTGCTATCG
AATATGGGCATTGGTTCAGACTCTGCGTCTTTCCTCATAAGTGCTGTCACAACTTTGTTA
ATGCTTCCCACCATTGGTGTTGCAATGAGACTAATGGACTTGGCTGGCAGAAGGTGGCTT
TTGCTGGCTACATTGCCCGTCTTGTTATCGTCACTTATTGTACTAGTCCTTGGCAATGTT
ATTAACATGGGTGAGGTCATGCACGCTGTGATCTCCACTGTTAGTGTTGTGGTATACTTC
TGCACCTTTGTTATGGGCTTTGGTCCTATCCCAAATATCCTCTGCTCTGAGATATTTCCC
ACCAGCGTTCGTGGAATCTGCATTGCTATATGTGCTCTTACTTTTTGGATCGGAGACATC
ATTGTCACCTACTCGCTCCCCATTATGCTCAACTCCATTGGACTTGGAGGTGTCTTCGCC
ATCTATGCTGTTGTGTGTGCTGTGGCTTGGGTATTCGTCTTCTTGAAAGTTCCTGAAACA
AAGGGCATGCCCCTTGAAGTCATTACAGAGTTCTTCGCCGTTGGAGCTAAGAGAGCTGCC
ACAGAATAA