Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048036
CDS Infomation

pacid=37464038 polypeptide=PGSC0003DMP400032531 locus=PGSC0003DMG401018664 ID=PGSC0003DMT400048036.v4.03 annot-version=v4.03
Sequence

ATGACATTGAATGGAAATTCAGGCATATTTTCCGAGCCTAAGCGGCATCTTCTGACGACT
GGCTGGAGTGTGTTTGTTAGTGCCAAAAGACTTGTCGCTGGAGATTCAGTTCTTTTCATC
TGGAATGAGAAAAATCAGCTTTTTTTGGGAATTCGTCGTGCAACTCGACCTCAGACTGTG
ATGCCATCATCTGTTCTGTCTAGTGACAGCATGCACATTGGATTACTTGCTGCTGCTGCT
CATGCTGCCGCTACCAATAGCTGTTTCACTGTTTTCTTTAACCCAAGGGCTAGCCCATCT
GAGTTTGTTATTCCACTTTCAAAATACATCAAAGCTGTTTATCACACACGTGTTTCTGTT
GGAATGCGTTTCCGGATGCTATTTGAGACTGAAGAATCAAGTGTTCGAAGGTACATGGGC
ACAATTACTGGCATTGGTGACTTAGATCCAGTTCGCTGGGCCAACTCTCACTGGCGGTCT
GTCAAGGTTGGTTGGGATGAGTCAACGGCAGGCGAGAGGCAACCTAGGGTTTCCCTATGG
GAGATAGAGCCTTTGACTACTTTTCCAATGTATCCATCTTTGTTCCCTCTTAGGCTAAAG
CGGCCTTGGTATCCAGGAACTTCATCTTTTCAAGAAAATAACAGTGAAGCTATTAATGGA
ATGGCATGGTTGAGAGGGGAAAGTAGTGAGCAAGGACCACATCTACTGAATCTTCAGTCT
TTTGGTGGCATGCTCCCCTGGATGCAACAAAGAGTTGATCCGACAATGCTCCGAAATGAT
CTTAACCAGCAGTATCAAGCTATGCTGGCTAGCGGTTTGCAAAATTTTGGGAGCGGAGAT
CTGATGAAACAGCAACTGATGCAGTTTCCGCAGCCCGTCCAATATGTTCAGCATGCAGGC
AGTCTTAATCCTCTCCTGCAGCAGCAGCAACAACAACAAGCAATGCAGCAGACAATTCAT
CAGCATATGTTGCCTGCACAAACTCAAGATAACCTTCAAAGGCAACAACAGCAACACGTT
AGCAATCAGACAGAGGAGCAATCTCATCATCATTCTTACCAGGAAGCATACCAAATACCA
AACAGCCAGCTCCAGCAGAAGCAACCATCAAATGTTCCTTCTCCATCATTCTCAAAGCCA
GATATAGCAGATCCAAGCTCCAAGTTCTCGGCATCCATTGCTCCATCAGGCATGCCAACA
GCGCTGGGTTCTTTATGTTCAGAAGGAACTAGTAACTTTTTGAATTTCAATATACTTGGT
CAGCAGCCTGTGATCATGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAAATCTTGG
ATGGCAAAATTTGCGCATTCACAATTGAACACGGGCTCCAATTCACCCTCACTCTCTGGA
TATGGGAAAGATACTTCCAATTCACAGGAAACATGTAGTCTAGATGCCCAGAATCAATCT
CTTTTTGGTGCTAATGTTGATTCTTCAGGGCTTCTCCTCCCGACAACTGTGTCTAACGTC
GCTACTACATCAATTGATGCTGATATATCCTCTATGCCACTAGGGACTTCTGGATTTTCG
AATTCTTTGTATGGTTATGTGCAAGATTCTTCTGACATGTTGCATAATGTAGGGCAAGTT
GATGCACAAACTGCGCCCCGTACATTTGTCAAGGTTTACAAATCAGCATCCCTTGGGAGG
TCATTGGATATCACTCGATTCAATAGCTATCATGAGCTACGACAGGAACTGGGACAGATG
TTCGGGATCGAAGGGTTTCTTGAAGACCCTCAAAGATCAGGCTGGCAGCTTGTATTTGTT
GACAGGGAGAATGATGTCCTTCTCCTTGGAGACGATCCATGGGAGGAATTTGTCAATAAT
GTTTGGTACATCAAAATTCTTTCACCCGAGGATGTGCAGAAACTGGGGAAGGAGGAGGTT
GGATCCCTAAATCGCGGTCTACCTGAAAGGATGAGCAGTAATAATAGTGCTGATGGTCGA
GATTTCATGTCCGGACTTTCATCTATAGGATCACTCGAGTACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032531
PEP Infomation

pacid=37464038 transcript=PGSC0003DMT400048036 locus=PGSC0003DMG401018664 ID=PGSC0003DMT400048036.v4.03 annot-version=v4.03
Sequence

MTLNGNSGIFSEPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTV
MPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSV
GMRFRMLFETEESSVRRYMGTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLW
EIEPLTTFPMYPSLFPLRLKRPWYPGTSSFQENNSEAINGMAWLRGESSEQGPHLLNLQS
FGGMLPWMQQRVDPTMLRNDLNQQYQAMLASGLQNFGSGDLMKQQLMQFPQPVQYVQHAG
SLNPLLQQQQQQQAMQQTIHQHMLPAQTQDNLQRQQQQHVSNQTEEQSHHHSYQEAYQIP
NSQLQQKQPSNVPSPSFSKPDIADPSSKFSASIAPSGMPTALGSLCSEGTSNFLNFNILG
QQPVIMEQQQQQQQQQQKSWMAKFAHSQLNTGSNSPSLSGYGKDTSNSQETCSLDAQNQS
LFGANVDSSGLLLPTTVSNVATTSIDADISSMPLGTSGFSNSLYGYVQDSSDMLHNVGQV
DAQTAPRTFVKVYKSASLGRSLDITRFNSYHELRQELGQMFGIEGFLEDPQRSGWQLVFV
DRENDVLLLGDDPWEEFVNNVWYIKILSPEDVQKLGKEEVGSLNRGLPERMSSNNSADGR
DFMSGLSSIGSLEY*

Transcript Sequence

Transcript ID

PGSC0003DMT400048036
Transcript Infomation

pacid=37464038 locus=PGSC0003DMG401018664 ID=PGSC0003DMT400048036.v4.03 annot-version=v4.03
Sequence

ATGACATTGAATGGAAATTCAGGCATATTTTCCGAGCCTAAGCGGCATCTTCTGACGACT
GGCTGGAGTGTGTTTGTTAGTGCCAAAAGACTTGTCGCTGGAGATTCAGTTCTTTTCATC
TGGAATGAGAAAAATCAGCTTTTTTTGGGAATTCGTCGTGCAACTCGACCTCAGACTGTG
ATGCCATCATCTGTTCTGTCTAGTGACAGCATGCACATTGGATTACTTGCTGCTGCTGCT
CATGCTGCCGCTACCAATAGCTGTTTCACTGTTTTCTTTAACCCAAGGGCTAGCCCATCT
GAGTTTGTTATTCCACTTTCAAAATACATCAAAGCTGTTTATCACACACGTGTTTCTGTT
GGAATGCGTTTCCGGATGCTATTTGAGACTGAAGAATCAAGTGTTCGAAGGTACATGGGC
ACAATTACTGGCATTGGTGACTTAGATCCAGTTCGCTGGGCCAACTCTCACTGGCGGTCT
GTCAAGGTTGGTTGGGATGAGTCAACGGCAGGCGAGAGGCAACCTAGGGTTTCCCTATGG
GAGATAGAGCCTTTGACTACTTTTCCAATGTATCCATCTTTGTTCCCTCTTAGGCTAAAG
CGGCCTTGGTATCCAGGAACTTCATCTTTTCAAGAAAATAACAGTGAAGCTATTAATGGA
ATGGCATGGTTGAGAGGGGAAAGTAGTGAGCAAGGACCACATCTACTGAATCTTCAGTCT
TTTGGTGGCATGCTCCCCTGGATGCAACAAAGAGTTGATCCGACAATGCTCCGAAATGAT
CTTAACCAGCAGTATCAAGCTATGCTGGCTAGCGGTTTGCAAAATTTTGGGAGCGGAGAT
CTGATGAAACAGCAACTGATGCAGTTTCCGCAGCCCGTCCAATATGTTCAGCATGCAGGC
AGTCTTAATCCTCTCCTGCAGCAGCAGCAACAACAACAAGCAATGCAGCAGACAATTCAT
CAGCATATGTTGCCTGCACAAACTCAAGATAACCTTCAAAGGCAACAACAGCAACACGTT
AGCAATCAGACAGAGGAGCAATCTCATCATCATTCTTACCAGGAAGCATACCAAATACCA
AACAGCCAGCTCCAGCAGAAGCAACCATCAAATGTTCCTTCTCCATCATTCTCAAAGCCA
GATATAGCAGATCCAAGCTCCAAGTTCTCGGCATCCATTGCTCCATCAGGCATGCCAACA
GCGCTGGGTTCTTTATGTTCAGAAGGAACTAGTAACTTTTTGAATTTCAATATACTTGGT
CAGCAGCCTGTGATCATGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAAATCTTGG
ATGGCAAAATTTGCGCATTCACAATTGAACACGGGCTCCAATTCACCCTCACTCTCTGGA
TATGGGAAAGATACTTCCAATTCACAGGAAACATGTAGTCTAGATGCCCAGAATCAATCT
CTTTTTGGTGCTAATGTTGATTCTTCAGGGCTTCTCCTCCCGACAACTGTGTCTAACGTC
GCTACTACATCAATTGATGCTGATATATCCTCTATGCCACTAGGGACTTCTGGATTTTCG
AATTCTTTGTATGGTTATGTGCAAGATTCTTCTGACATGTTGCATAATGTAGGGCAAGTT
GATGCACAAACTGCGCCCCGTACATTTGTCAAGGTTTACAAATCAGCATCCCTTGGGAGG
TCATTGGATATCACTCGATTCAATAGCTATCATGAGCTACGACAGGAACTGGGACAGATG
TTCGGGATCGAAGGGTTTCTTGAAGACCCTCAAAGATCAGGCTGGCAGCTTGTATTTGTT
GACAGGGAGAATGATGTCCTTCTCCTTGGAGACGATCCATGGGAGGAATTTGTCAATAAT
GTTTGGTACATCAAAATTCTTTCACCCGAGGATGTGCAGAAACTGGGGAAGGAGGAGGTT
GGATCCCTAAATCGCGGTCTACCTGAAAGGATGAGCAGTAATAATAGTGCTGATGGTCGA
GATTTCATGTCCGGACTTTCATCTATAGGATCACTCGAGTACTGA