Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400048013
CDS Infomation

pacid=37436864 polypeptide=PGSC0003DMP400032510 locus=PGSC0003DMG400018656 ID=PGSC0003DMT400048013.v4.03 annot-version=v4.03
Sequence

ATGGGGTGCGCAACCTCTAAGCATGATGACTTGCCGGCGGTCGCTCTATGCCGTGAACGT
TGCGCCTTTTTAGACCAAGCTATTCACCACCGTTACGCTTTTGCCGAAGCCCATGTAGCT
TATCTTCACTCATTGAAATCCGTCGGCGCTTCTCTTCACCGGTTTTTCCAACATGATCTC
GATCTTTCTTCTTCATCATCTGGTAGTCCTCTCTCTCCGCTTCTCCATCTCCCCGCTCAT
CGGAAAGGTCACCTTCCAGAACCTTCCTCTGCCCTTCCTCATCCAGTTAAAAAACCTGCT
GCTCCCATTCACCACCCTCACGATTCTCACTCTAGTTCCGGTTCGCACCTTCACTTCCAC
TCTGAATCCGACGAAGACGATGATTCCGGTTCCGAGTCTTTGCATCACCATACGGAAACC
CCTACTCATGGTAATCAGTATGGTCAGTTCACTTATGCTGATCATGAAACCCTAGGGTTC
GGAGCACCACCATATCAAGTTGGTGGGGGTGGGGGTGGGGGGTTCGGACCACCATATCAA
GTCGCTGGAGGTGGTGGATTCGGACCACCATATCAAGTCGCTGGGGGTGGTGGGTTCGGG
CCACCGTATCAAGTCGGCGAGGCTGGTGGTGGGTTCGGAGCACCATATCAAGTTGGTGGT
GGTGGTGGTGGGTTCGGGGCACCATATCAAGTTGGTGGTGGTGGGTTCGGCGCACCATAT
CAAGTCGGTGGGGGTGGTGGAGGGTTTATGCATATGAATTTCATGAGGAAACAAACGACG
CCCTCGGTGACCTATCATCAACGACCCATAAGTCCGGAGACTGTTCGAATGGGTGAAGCG
TCTTCTTCCTATTATCCTTATCCCAATAGTAACAATCCTAATTCTTACAACAACTATCCG
AATTATCCCAATTACGCTGGCGATTTTTTTTCCTCTTCGATTCAAAGGCCGTACGGTGTT
TCATCTCCCCCGGCGCCGTCTGGAGCTGGGCCTTCATCAGCGCCGTCAACTTCAAAACCA
CCTCCCCCGCCGCCCTCTCCACCGAGGACCTCACCTTGGGATTTTCTGAACCCTTTTGAG
ACTTTTGAGAGTAATAATTACCCTACACCGTATACGCCAAGCCGAGACTCGAGAGAGGTT
AGGGAAGAAGAAGGTATCCCTGATTTGGAAGACGAGGATTTTGAGCACGAGGTTGTTAAG
GAAGTTCACGGACATCAGAAGTTTGTCGAAGGCGAAAGCGAAAGCGAAGGCCACGGAGGG
AACCATTCAAAAGCAGTGGCAGAGGAGGAGAGAGAGAAGCAAAGTGATTCGGAGTCGCTA
TACCATGGGAGGCCAAGTGCGTCAATGGAAAATGAGCAGGTGGAGTTTGAGGTACACGTT
GTGGATAAGAAAGTGGTAGATGAGGAAGGAAAGTCAGGGCATGGGGGAAATGTTGCTGGG
TTCAAAGCTCGTGCATTCAAGGACGACTCTGATGTTGTGAAAGAGATTCAGGTTCAGTTT
GAGCTAGCTTCTGAATCTGGAAATGAGCTAGCTAAGATGCTGGAGGTTGGAAAGCTTCCC
CACAATCGTAAGAACGCCACATATCAAGTGTCTTCCAAGATGTTGCATGCAATTTCACCT
TCATTGTCCGTAGTATCATCACAACCTTCTACGTCAAAGAATGCTGCGATTCAGATTAAT
GATCCTGCTGCTTCAGATGTTGAAGGAGATGTTAGTTCAAGGTACAAGAACCTTTCTTCA
ACGTTAAACAAGCTGTACCTCTGGGAGAAGAAACTGTATCAGGAGGTTAAGTCTGAGGAG
AAGATAAGGGTGCTTCATGAAAGGAAATCTGAAAAGCTGAAGAGATTAGATCAAAAGGGT
GCTGAGGCTCACAAGGTTGACATGACAAGGCAATTGGTTAGAAGTCTCTCCACAAAAATT
AGAATTGCGATTCAGGTTGTCGATAAGATCTCTGAGAAGATAAACAAGATGAGGGATGAA
GAGTTATGGCCGCAACTGAATATACTTATTCAGGGGTTAAGTAAAATGTGGAAAGGCATG
CTTGAGTGTCATCGTAACCAATGCCAGGCTATTGGAGAAGCCAAAAGATTAGATGCCATT
GCATCTCACAAACACTTGAGTGATGCTCATCTTGAAGCCACTCTGCAGCTTGAACATGAG
CTTTTGAACTGGACTTTGAGATTCTCTTGCTGGGTGAATGCACAGAAGGGCTATGTGAGA
GCACTAAACACCTGGCTCATGAAATGTCTTCTGTATGTGCCCGAGGAAACAGCCGATGGA
AGAGTTCCCTTTTCTCCAGGCAGAATTGGTGCTCCCCCAATTTTTGTCATCTGTAATCAG
TGGTCACAAACCATAGAAGGAGTTTCTGAGAAAGAGGTTGTTGACTGTATGCGAGATTTC
GCATCAAATGTCCTTCAGCTCTGGGAGCGAGATAAACATGAAATGCGGCAAAGGATGATG
GTGCACAAGGATATGGAGAGAAAAGTGAAAAACCTTGAGAGGGAGGATCAGAAGATACAA
AAGGGGATTCATGCACTGGACAAAAGAATAGTACTCATTTCTGGGGATGAAACTGGTCTC
TCATTAAATAGGCATGTCGTTTACCAGAGTGACACAAGCAAAAATAGTAGCCTTCAGGTC
GGTCTGAGACATATTTTTGAGGCCATGGAAAGGTTTACTGCCAAATCCTTGAAGGTGTAT
GAGGAACTTCTACAACGCATTGAAGAGGATGATCTGGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400032510
PEP Infomation

pacid=37436864 transcript=PGSC0003DMT400048013 locus=PGSC0003DMG400018656 ID=PGSC0003DMT400048013.v4.03 annot-version=v4.03
Sequence

MGCATSKHDDLPAVALCRERCAFLDQAIHHRYAFAEAHVAYLHSLKSVGASLHRFFQHDL
DLSSSSSGSPLSPLLHLPAHRKGHLPEPSSALPHPVKKPAAPIHHPHDSHSSSGSHLHFH
SESDEDDDSGSESLHHHTETPTHGNQYGQFTYADHETLGFGAPPYQVGGGGGGGFGPPYQ
VAGGGGFGPPYQVAGGGGFGPPYQVGEAGGGFGAPYQVGGGGGGFGAPYQVGGGGFGAPY
QVGGGGGGFMHMNFMRKQTTPSVTYHQRPISPETVRMGEASSSYYPYPNSNNPNSYNNYP
NYPNYAGDFFSSSIQRPYGVSSPPAPSGAGPSSAPSTSKPPPPPPSPPRTSPWDFLNPFE
TFESNNYPTPYTPSRDSREVREEEGIPDLEDEDFEHEVVKEVHGHQKFVEGESESEGHGG
NHSKAVAEEEREKQSDSESLYHGRPSASMENEQVEFEVHVVDKKVVDEEGKSGHGGNVAG
FKARAFKDDSDVVKEIQVQFELASESGNELAKMLEVGKLPHNRKNATYQVSSKMLHAISP
SLSVVSSQPSTSKNAAIQINDPAASDVEGDVSSRYKNLSSTLNKLYLWEKKLYQEVKSEE
KIRVLHERKSEKLKRLDQKGAEAHKVDMTRQLVRSLSTKIRIAIQVVDKISEKINKMRDE
ELWPQLNILIQGLSKMWKGMLECHRNQCQAIGEAKRLDAIASHKHLSDAHLEATLQLEHE
LLNWTLRFSCWVNAQKGYVRALNTWLMKCLLYVPEETADGRVPFSPGRIGAPPIFVICNQ
WSQTIEGVSEKEVVDCMRDFASNVLQLWERDKHEMRQRMMVHKDMERKVKNLEREDQKIQ
KGIHALDKRIVLISGDETGLSLNRHVVYQSDTSKNSSLQVGLRHIFEAMERFTAKSLKVY
EELLQRIEEDDLA*

Transcript Sequence

Transcript ID

PGSC0003DMT400048013
Transcript Infomation

pacid=37436864 locus=PGSC0003DMG400018656 ID=PGSC0003DMT400048013.v4.03 annot-version=v4.03
Sequence

ATGGGGTGCGCAACCTCTAAGCATGATGACTTGCCGGCGGTCGCTCTATGCCGTGAACGT
TGCGCCTTTTTAGACCAAGCTATTCACCACCGTTACGCTTTTGCCGAAGCCCATGTAGCT
TATCTTCACTCATTGAAATCCGTCGGCGCTTCTCTTCACCGGTTTTTCCAACATGATCTC
GATCTTTCTTCTTCATCATCTGGTAGTCCTCTCTCTCCGCTTCTCCATCTCCCCGCTCAT
CGGAAAGGTCACCTTCCAGAACCTTCCTCTGCCCTTCCTCATCCAGTTAAAAAACCTGCT
GCTCCCATTCACCACCCTCACGATTCTCACTCTAGTTCCGGTTCGCACCTTCACTTCCAC
TCTGAATCCGACGAAGACGATGATTCCGGTTCCGAGTCTTTGCATCACCATACGGAAACC
CCTACTCATGGTAATCAGTATGGTCAGTTCACTTATGCTGATCATGAAACCCTAGGGTTC
GGAGCACCACCATATCAAGTTGGTGGGGGTGGGGGTGGGGGGTTCGGACCACCATATCAA
GTCGCTGGAGGTGGTGGATTCGGACCACCATATCAAGTCGCTGGGGGTGGTGGGTTCGGG
CCACCGTATCAAGTCGGCGAGGCTGGTGGTGGGTTCGGAGCACCATATCAAGTTGGTGGT
GGTGGTGGTGGGTTCGGGGCACCATATCAAGTTGGTGGTGGTGGGTTCGGCGCACCATAT
CAAGTCGGTGGGGGTGGTGGAGGGTTTATGCATATGAATTTCATGAGGAAACAAACGACG
CCCTCGGTGACCTATCATCAACGACCCATAAGTCCGGAGACTGTTCGAATGGGTGAAGCG
TCTTCTTCCTATTATCCTTATCCCAATAGTAACAATCCTAATTCTTACAACAACTATCCG
AATTATCCCAATTACGCTGGCGATTTTTTTTCCTCTTCGATTCAAAGGCCGTACGGTGTT
TCATCTCCCCCGGCGCCGTCTGGAGCTGGGCCTTCATCAGCGCCGTCAACTTCAAAACCA
CCTCCCCCGCCGCCCTCTCCACCGAGGACCTCACCTTGGGATTTTCTGAACCCTTTTGAG
ACTTTTGAGAGTAATAATTACCCTACACCGTATACGCCAAGCCGAGACTCGAGAGAGGTT
AGGGAAGAAGAAGGTATCCCTGATTTGGAAGACGAGGATTTTGAGCACGAGGTTGTTAAG
GAAGTTCACGGACATCAGAAGTTTGTCGAAGGCGAAAGCGAAAGCGAAGGCCACGGAGGG
AACCATTCAAAAGCAGTGGCAGAGGAGGAGAGAGAGAAGCAAAGTGATTCGGAGTCGCTA
TACCATGGGAGGCCAAGTGCGTCAATGGAAAATGAGCAGGTGGAGTTTGAGGTACACGTT
GTGGATAAGAAAGTGGTAGATGAGGAAGGAAAGTCAGGGCATGGGGGAAATGTTGCTGGG
TTCAAAGCTCGTGCATTCAAGGACGACTCTGATGTTGTGAAAGAGATTCAGGTTCAGTTT
GAGCTAGCTTCTGAATCTGGAAATGAGCTAGCTAAGATGCTGGAGGTTGGAAAGCTTCCC
CACAATCGTAAGAACGCCACATATCAAGTGTCTTCCAAGATGTTGCATGCAATTTCACCT
TCATTGTCCGTAGTATCATCACAACCTTCTACGTCAAAGAATGCTGCGATTCAGATTAAT
GATCCTGCTGCTTCAGATGTTGAAGGAGATGTTAGTTCAAGGTACAAGAACCTTTCTTCA
ACGTTAAACAAGCTGTACCTCTGGGAGAAGAAACTGTATCAGGAGGTTAAGTCTGAGGAG
AAGATAAGGGTGCTTCATGAAAGGAAATCTGAAAAGCTGAAGAGATTAGATCAAAAGGGT
GCTGAGGCTCACAAGGTTGACATGACAAGGCAATTGGTTAGAAGTCTCTCCACAAAAATT
AGAATTGCGATTCAGGTTGTCGATAAGATCTCTGAGAAGATAAACAAGATGAGGGATGAA
GAGTTATGGCCGCAACTGAATATACTTATTCAGGGGTTAAGTAAAATGTGGAAAGGCATG
CTTGAGTGTCATCGTAACCAATGCCAGGCTATTGGAGAAGCCAAAAGATTAGATGCCATT
GCATCTCACAAACACTTGAGTGATGCTCATCTTGAAGCCACTCTGCAGCTTGAACATGAG
CTTTTGAACTGGACTTTGAGATTCTCTTGCTGGGTGAATGCACAGAAGGGCTATGTGAGA
GCACTAAACACCTGGCTCATGAAATGTCTTCTGTATGTGCCCGAGGAAACAGCCGATGGA
AGAGTTCCCTTTTCTCCAGGCAGAATTGGTGCTCCCCCAATTTTTGTCATCTGTAATCAG
TGGTCACAAACCATAGAAGGAGTTTCTGAGAAAGAGGTTGTTGACTGTATGCGAGATTTC
GCATCAAATGTCCTTCAGCTCTGGGAGCGAGATAAACATGAAATGCGGCAAAGGATGATG
GTGCACAAGGATATGGAGAGAAAAGTGAAAAACCTTGAGAGGGAGGATCAGAAGATACAA
AAGGGGATTCATGCACTGGACAAAAGAATAGTACTCATTTCTGGGGATGAAACTGGTCTC
TCATTAAATAGGCATGTCGTTTACCAGAGTGACACAAGCAAAAATAGTAGCCTTCAGGTC
GGTCTGAGACATATTTTTGAGGCCATGGAAAGGTTTACTGCCAAATCCTTGAAGGTGTAT
GAGGAACTTCTACAACGCATTGAAGAGGATGATCTGGCTTAA