Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047998
CDS Infomation

pacid=37438390 polypeptide=PGSC0003DMP400032497 locus=PGSC0003DMG400018648 ID=PGSC0003DMT400047998.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTGTATCATCTGAAGAAGGTTCTGATCAGCAGAGTGAGAGATGTGGAAGCTAC
AGTTTAAGTGCTGATGTGAGTGAATCTGAAAGTTCTTCAAGCAGTTTCTCTTGTCGGCGC
TATGATGCTGAAGGCGCATCCAGTTCTATGGCCTCTTCGCCGCTCGCTTGCCGGAGATTC
ACTGCGAAATCGGAGTTTCCAACACCAATGTTACCTCCATTTATGTTCCCGGGGATTGGC
GGGAAAGATGTGGTGCCCTGCAATGAAAAGTCTGAGAAACGCCAGGCAGATTTATCTGAA
ATTGATCTGATGAAGGAGAGATTCGCCAAGCTGCTTCTTGGTGAGGACATGTCTGGAGGG
GGTAAAGGGGTTTCTACGGCACTTGCAATCTCAAATGCTATCACAAATCTGTCTGCTACT
ATATTTGGAGAACTATGGAGGTTGGAGCCACTGGCCCTACAAAAGAAGGCAATGTGGTGT
AGGGAGATGGAGTGGCTGTTATGTGTTAGTGACTCTATTGTGGAGCTTGTGCCTTCCATT
CAACAGTTCCCTGGAGGAGGCACATATGAAGTAATGGCAACACGACCACGTTCTGATTTA
TATTTGAACTTGCCTGCTCTGAAGAAGCTTGATGCTATGTTGATTAGCATTCTCGATGGA
TTTCGTGACACAGAGTTTTGGTATGTGGATCGAGGGATAGTTTTAGCTGAAGGAGATGAC
TGTGACTCCTATCCTCCCGGTATAGGGTTTGGTAGGCCTTCAGTTCGGCAGGAAGAGAAA
TGGTGGTTGCCTTGCCCAAAAGTTCCGCCAAAAGGGTTGTCAGAAGAAGCTAGGAAGAGA
GTGCAACAATGTAGGGATTGCACAAACCAGATACTGAAGGCAGCCTTGGCAATCAACAGT
AATGTGCTTGCTGAAATGGAGACTCCAAGTGCCTATATTGAAACTTTACCCAAGAGTGGA
AAAACATGTCTAGGTGATATCATCTATCGCTACATCACTGCTGACAATTTCTCACCTGAA
TGTCTTCTTGATTGCCTGGACTTGTCATCAGAGCACCATACACTGGAAGTTGCAAATAGA
ATTGAGGCTGCTGTGCATGTTTGGAGACTCAAGGACCAGAAGAAACATCCACATAAAAGA
AAATCTAAAGGCAAATCATGGGGAGGGAAGGTCAAGGGCCTTGTTGCAGATGGTGGTAAG
AATCAATATCTGGCAGAACGAGCAGAAACGCTCTTGCATAGTCTCAGGCTTCGCTTCCCT
GGTCTTCCTCAAACTGCACTTGACATGAACAAAATTCAGTATAACAAGGTAGGTGATACA
AACTCACATGAAGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400032497
PEP Infomation

pacid=37438390 transcript=PGSC0003DMT400047998 locus=PGSC0003DMG400018648 ID=PGSC0003DMT400047998.v4.03 annot-version=v4.03
Sequence

MGSVSSEEGSDQQSERCGSYSLSADVSESESSSSSFSCRRYDAEGASSSMASSPLACRRF
TAKSEFPTPMLPPFMFPGIGGKDVVPCNEKSEKRQADLSEIDLMKERFAKLLLGEDMSGG
GKGVSTALAISNAITNLSATIFGELWRLEPLALQKKAMWCREMEWLLCVSDSIVELVPSI
QQFPGGGTYEVMATRPRSDLYLNLPALKKLDAMLISILDGFRDTEFWYVDRGIVLAEGDD
CDSYPPGIGFGRPSVRQEEKWWLPCPKVPPKGLSEEARKRVQQCRDCTNQILKAALAINS
NVLAEMETPSAYIETLPKSGKTCLGDIIYRYITADNFSPECLLDCLDLSSEHHTLEVANR
IEAAVHVWRLKDQKKHPHKRKSKGKSWGGKVKGLVADGGKNQYLAERAETLLHSLRLRFP
GLPQTALDMNKIQYNKVGDTNSHEV*

Transcript Sequence

Transcript ID

PGSC0003DMT400047998
Transcript Infomation

pacid=37438390 locus=PGSC0003DMG400018648 ID=PGSC0003DMT400047998.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTGTATCATCTGAAGAAGGTTCTGATCAGCAGAGTGAGAGATGTGGAAGCTAC
AGTTTAAGTGCTGATGTGAGTGAATCTGAAAGTTCTTCAAGCAGTTTCTCTTGTCGGCGC
TATGATGCTGAAGGCGCATCCAGTTCTATGGCCTCTTCGCCGCTCGCTTGCCGGAGATTC
ACTGCGAAATCGGAGTTTCCAACACCAATGTTACCTCCATTTATGTTCCCGGGGATTGGC
GGGAAAGATGTGGTGCCCTGCAATGAAAAGTCTGAGAAACGCCAGGCAGATTTATCTGAA
ATTGATCTGATGAAGGAGAGATTCGCCAAGCTGCTTCTTGGTGAGGACATGTCTGGAGGG
GGTAAAGGGGTTTCTACGGCACTTGCAATCTCAAATGCTATCACAAATCTGTCTGCTACT
ATATTTGGAGAACTATGGAGGTTGGAGCCACTGGCCCTACAAAAGAAGGCAATGTGGTGT
AGGGAGATGGAGTGGCTGTTATGTGTTAGTGACTCTATTGTGGAGCTTGTGCCTTCCATT
CAACAGTTCCCTGGAGGAGGCACATATGAAGTAATGGCAACACGACCACGTTCTGATTTA
TATTTGAACTTGCCTGCTCTGAAGAAGCTTGATGCTATGTTGATTAGCATTCTCGATGGA
TTTCGTGACACAGAGTTTTGGTATGTGGATCGAGGGATAGTTTTAGCTGAAGGAGATGAC
TGTGACTCCTATCCTCCCGGTATAGGGTTTGGTAGGCCTTCAGTTCGGCAGGAAGAGAAA
TGGTGGTTGCCTTGCCCAAAAGTTCCGCCAAAAGGGTTGTCAGAAGAAGCTAGGAAGAGA
GTGCAACAATGTAGGGATTGCACAAACCAGATACTGAAGGCAGCCTTGGCAATCAACAGT
AATGTGCTTGCTGAAATGGAGACTCCAAGTGCCTATATTGAAACTTTACCCAAGAGTGGA
AAAACATGTCTAGGTGATATCATCTATCGCTACATCACTGCTGACAATTTCTCACCTGAA
TGTCTTCTTGATTGCCTGGACTTGTCATCAGAGCACCATACACTGGAAGTTGCAAATAGA
ATTGAGGCTGCTGTGCATGTTTGGAGACTCAAGGACCAGAAGAAACATCCACATAAAAGA
AAATCTAAAGGCAAATCATGGGGAGGGAAGGTCAAGGGCCTTGTTGCAGATGGTGGTAAG
AATCAATATCTGGCAGAACGAGCAGAAACGCTCTTGCATAGTCTCAGGCTTCGCTTCCCT
GGTCTTCCTCAAACTGCACTTGACATGAACAAAATTCAGTATAACAAGGTAGGTGATACA
AACTCACATGAAGTGTAA