Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047987
CDS Infomation

pacid=37439732 polypeptide=PGSC0003DMP400032490 locus=PGSC0003DMG400018645 ID=PGSC0003DMT400047987.v4.03 annot-version=v4.03
Sequence

ATGGCTAAGTCTTCAGGTTCTGGTGCACACCAGCAGATGAGCCTGGACCTTCTTCCATCA
GCACTATTGGCCACTGTGATGACGAAGCTAGACATAGCTTCCATTCGTTCCCTGGCATGC
ACTTGCAAGGCCTTCCATTCATGTGCCTCACACATGCTTTGCTTCATTCCTAGTTTTCAT
CTCCTCGATATTGCTCCGCCTGCTGAATATATAAGGCCGTTGCTACCTCCCAATCCTTAC
CTTCGTAGCTTGAAGGTAGATTGCATGCGACTTGATGATTCATCCCTTGATTGTCTTCTT
CAGCCGACTTTACAAGAGCTTTGCCTTCATAACTGCGCTGATTTCAGTGGAAGGCTTCTG
TCTCAGGTCGGCCAGTACTGTAAAGACCTCAGGTTTCTTTATTTGAGCTCTTTGGCGGAG
AAGAGAGGCAGATCAATTGATGTATCTGATCTAGAGGTCTTATTTGGCGGATGCACTCAG
CTGGAAACACTGATCCTGATGTTTGATGTCTCAATGTTTTTGCGGCACAATTTTGCCCGT
GTTTGGTCTATTGCCCCTACAACACTGGTATCTCTTGAAATGGGCTACATTTCTTCGGTA
ATGGTGACAGAATTGCTTAGCCCGCCTGTGGCACCATATCAGTCAATTGAGCATATTCGG
CCATCCATATTACCAGGAATACAGAAGTTGTGTCTTTCAGTGGATTATATTACTGACACC
ATGATCAGCACAATAACTAATAATATCAACTGTTTGACACATTTGGACCTTCGAGACTCG
CCAATTACGGAACCAAGATTGGCGTTTGATCTTACCAATGCAGGTATACAACAAATTAAT
CTGCACGGGAGATTGAAACATTTGTCGTTGGTGAGAAGTCAAGAGATTTTCCCAGCTTAC
TTCAAGCGAGTTAATGATCTCGGTATTCTTCTTATGGCTGATAGATGCTCTGACATGGAA
AGTATTTGTCTTGGTGGTTTTTGTCAGGTTACAGACACAGGTTTTAGAACAATTTTGCAT
TCATGTTCAAAAATTTTCAAGCTGAGGATCTATCATGGACCCCACTTGACTGATCTTGTA
TTTCATGACATTGCTGCAACTTCACTTACTTTGACACATGTCAGTTTAAGATGGTGTAAT
CTTTTGACGAACCATGGCGTTGCACGACTGGTTTCCAATGGAAATCTTAGTGTGCTTGAC
TTGAGGGACTGTAGGAATATTGGAGATGATGCCCTTCGAACCATAAGCAACCTTTCTGAA
TTGAAGGCTTTACTGATTGATGGTTCTGATATTAGTGATATGGGATTGTCCCATTTATCA
AAAGGAGCAATGCGTTCGCTGGTATCATTGTCCATACGAGGGTGCAAGAGACTAACTGAC
AATTGTATTTCCTTTCTCTTTGATGAATCTTCTAATAGTGAATTGAGAGAATTGGACTTG
TCAAACATTCCAAACCTATCTGATGCTGGTATACTTTTGCTTGCAAAAAGACGTATTCCA
CTACTGGAGCTTAGAATGCGTCAATGTCCGTTGATAAGTGATACTTCAATTATGGTGTTA
GCATCAATGAAGGTTGATGAAGAAGGATGGTACGGAAGCAGTTTACGGCTGTTGGATCTC
TATAATTGTGGAGGTATAACTCAGCTTTCATTCCAATGGTTAAAGAAACCTTATTTCCCG
AGATTGAGATGGTTAGGAGTATCTAGTAGTGTCAGCAGGGATGTGCTGGACGCTTTATCC
AGGAATAGACCATTTCTGCATATAGTTTTTCATGGGGAGGAGCTGGGGATGACTGGCCAA
TGGGATAATTCAGATGATCTCTATATGCATGACTATGATGAAGTTGATGAGTTGGAACAA
TGGCTTGAAGGAGAAAATGAGGGAGATGAAGACATTCAAGAAGCAGAAAACAACGCAGAT
CCCATGCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400032490
PEP Infomation

pacid=37439732 transcript=PGSC0003DMT400047987 locus=PGSC0003DMG400018645 ID=PGSC0003DMT400047987.v4.03 annot-version=v4.03
Sequence

MAKSSGSGAHQQMSLDLLPSALLATVMTKLDIASIRSLACTCKAFHSCASHMLCFIPSFH
LLDIAPPAEYIRPLLPPNPYLRSLKVDCMRLDDSSLDCLLQPTLQELCLHNCADFSGRLL
SQVGQYCKDLRFLYLSSLAEKRGRSIDVSDLEVLFGGCTQLETLILMFDVSMFLRHNFAR
VWSIAPTTLVSLEMGYISSVMVTELLSPPVAPYQSIEHIRPSILPGIQKLCLSVDYITDT
MISTITNNINCLTHLDLRDSPITEPRLAFDLTNAGIQQINLHGRLKHLSLVRSQEIFPAY
FKRVNDLGILLMADRCSDMESICLGGFCQVTDTGFRTILHSCSKIFKLRIYHGPHLTDLV
FHDIAATSLTLTHVSLRWCNLLTNHGVARLVSNGNLSVLDLRDCRNIGDDALRTISNLSE
LKALLIDGSDISDMGLSHLSKGAMRSLVSLSIRGCKRLTDNCISFLFDESSNSELRELDL
SNIPNLSDAGILLLAKRRIPLLELRMRQCPLISDTSIMVLASMKVDEEGWYGSSLRLLDL
YNCGGITQLSFQWLKKPYFPRLRWLGVSSSVSRDVLDALSRNRPFLHIVFHGEELGMTGQ
WDNSDDLYMHDYDEVDELEQWLEGENEGDEDIQEAENNADPML*

Transcript Sequence

Transcript ID

PGSC0003DMT400047987
Transcript Infomation

pacid=37439732 locus=PGSC0003DMG400018645 ID=PGSC0003DMT400047987.v4.03 annot-version=v4.03
Sequence

ATGGCTAAGTCTTCAGGTTCTGGTGCACACCAGCAGATGAGCCTGGACCTTCTTCCATCA
GCACTATTGGCCACTGTGATGACGAAGCTAGACATAGCTTCCATTCGTTCCCTGGCATGC
ACTTGCAAGGCCTTCCATTCATGTGCCTCACACATGCTTTGCTTCATTCCTAGTTTTCAT
CTCCTCGATATTGCTCCGCCTGCTGAATATATAAGGCCGTTGCTACCTCCCAATCCTTAC
CTTCGTAGCTTGAAGGTAGATTGCATGCGACTTGATGATTCATCCCTTGATTGTCTTCTT
CAGCCGACTTTACAAGAGCTTTGCCTTCATAACTGCGCTGATTTCAGTGGAAGGCTTCTG
TCTCAGGTCGGCCAGTACTGTAAAGACCTCAGGTTTCTTTATTTGAGCTCTTTGGCGGAG
AAGAGAGGCAGATCAATTGATGTATCTGATCTAGAGGTCTTATTTGGCGGATGCACTCAG
CTGGAAACACTGATCCTGATGTTTGATGTCTCAATGTTTTTGCGGCACAATTTTGCCCGT
GTTTGGTCTATTGCCCCTACAACACTGGTATCTCTTGAAATGGGCTACATTTCTTCGGTA
ATGGTGACAGAATTGCTTAGCCCGCCTGTGGCACCATATCAGTCAATTGAGCATATTCGG
CCATCCATATTACCAGGAATACAGAAGTTGTGTCTTTCAGTGGATTATATTACTGACACC
ATGATCAGCACAATAACTAATAATATCAACTGTTTGACACATTTGGACCTTCGAGACTCG
CCAATTACGGAACCAAGATTGGCGTTTGATCTTACCAATGCAGGTATACAACAAATTAAT
CTGCACGGGAGATTGAAACATTTGTCGTTGGTGAGAAGTCAAGAGATTTTCCCAGCTTAC
TTCAAGCGAGTTAATGATCTCGGTATTCTTCTTATGGCTGATAGATGCTCTGACATGGAA
AGTATTTGTCTTGGTGGTTTTTGTCAGGTTACAGACACAGGTTTTAGAACAATTTTGCAT
TCATGTTCAAAAATTTTCAAGCTGAGGATCTATCATGGACCCCACTTGACTGATCTTGTA
TTTCATGACATTGCTGCAACTTCACTTACTTTGACACATGTCAGTTTAAGATGGTGTAAT
CTTTTGACGAACCATGGCGTTGCACGACTGGTTTCCAATGGAAATCTTAGTGTGCTTGAC
TTGAGGGACTGTAGGAATATTGGAGATGATGCCCTTCGAACCATAAGCAACCTTTCTGAA
TTGAAGGCTTTACTGATTGATGGTTCTGATATTAGTGATATGGGATTGTCCCATTTATCA
AAAGGAGCAATGCGTTCGCTGGTATCATTGTCCATACGAGGGTGCAAGAGACTAACTGAC
AATTGTATTTCCTTTCTCTTTGATGAATCTTCTAATAGTGAATTGAGAGAATTGGACTTG
TCAAACATTCCAAACCTATCTGATGCTGGTATACTTTTGCTTGCAAAAAGACGTATTCCA
CTACTGGAGCTTAGAATGCGTCAATGTCCGTTGATAAGTGATACTTCAATTATGGTGTTA
GCATCAATGAAGGTTGATGAAGAAGGATGGTACGGAAGCAGTTTACGGCTGTTGGATCTC
TATAATTGTGGAGGTATAACTCAGCTTTCATTCCAATGGTTAAAGAAACCTTATTTCCCG
AGATTGAGATGGTTAGGAGTATCTAGTAGTGTCAGCAGGGATGTGCTGGACGCTTTATCC
AGGAATAGACCATTTCTGCATATAGTTTTTCATGGGGAGGAGCTGGGGATGACTGGCCAA
TGGGATAATTCAGATGATCTCTATATGCATGACTATGATGAAGTTGATGAGTTGGAACAA
TGGCTTGAAGGAGAAAATGAGGGAGATGAAGACATTCAAGAAGCAGAAAACAACGCAGAT
CCCATGCTGTAA