Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047943
CDS Infomation

pacid=37435868 polypeptide=PGSC0003DMP400032461 locus=PGSC0003DMG403018633 ID=PGSC0003DMT400047943.v4.03 annot-version=v4.03
Sequence

ATGTTTGGTAGTTCAAGTGCCAAAGGAGGAATTTCCTCACTCCTGAGATGCAGGGGAGTT
CCCAAGGCCAAGAGGAGAACAATTGTGGTTGGTCTCAAATCCGATAACAGCAGCAGAGAA
ATGCTGCTTCGTTTGCTCAATTTAGTCGTAATGCCCGGGGACTATGTTCTGTCTGTTCAT
GTACAAGAACCAAATGATACATTTGATCCAAATACTTTTCACATTCATGAGGATCTATGT
AAATCCAAGAAGGTGGATTTTCAAATCAAGGTTTGTGCAGGAGAGACCTACATAAATGAG
TTGAGTAATCAAGTACGTATAAACTTTGCCACAATGCTTGCCGTAGGATGCAGCAGCTCC
AGGCCAAGTGATCAGATTGCTGGCAAAATTTTGAAAGAATTGCCTCCTACTTGCTCCCTT
CTAGTAATGGATAATGGAGGAAAAATCCTACTCCAGAGGCCGGGGACTTCCCAAGAAGGT
GCTCCCATTAAAGTTTTTCAATCATCTGAGTCCTCTCTGTCAGTGTCCAGCAGCTCTACA
CAGTCAAGAGACAAGTATCAGATTCAAAAATCTTTGTCAATGACATGTTCTTCAACGACA
ACTTCATCACAGCCGAATAGAAATGCAACTTTTCCTAGAAACAAGAAGCTCAATAATGCT
ACAGCTAAGAGTCTGTTTCAGAGAATAGCTTGCTTAGAATCAATGGGCTGCGCCAGACGC
TTCACAACGGATGAACTTAGCTGTGCAACAGACAACTTCAGTCCCAATTTATTGACCGGA
GTGGGTGGACATAGTCAAGTCTATCGAGCCAATCTCGAGAATGGCCAGCTTGCAGCAGTG
AAGGTCCTTAAAAACACACGATACGCCGAGGATGATCTTTTTCAGGAAGTTGAAATACTG
AGTAATCTGAAACACGAGAACTTAATTCAGCTTGTCGGTTACAGTTACAGTAAGGATATG
CAAGCAATCGTGTATAATCTACTGAAGGACAGTCTGAAGCAAAGACTAAAACAGCTTAAT
TGGAACACAAGGATGCAAGTTGCGATAGGAGTGGCAAGGGGATTGGAGTACCTCCATTCT
CAAACCCCTCCTATCGTTCACAGAGATGTGAAATCATCAAATATTCTCTTATCTGATGAT
TGCCACCCACAACTATCAGATTTTGGAGCAGCAGTGGTACACCAGGAAACTCAGCAAGAT
TCAGCTTGTGTGAAACCAATTCACATTGTTGGGACATTTGGATACCTGGCACCTGAGTAC
ATCATGTATGGCAAAGTTGATGAGAAGATAGATGTATACTCTTATGGGGTGGTTCTGCTA
GAATTGATCACAGGGAAACGAGCCATCGAAAAAGACTTGGAAGCTCATCATGAAAGCTTA
GTGTTGTGGGCAAGGTCTCTGCTCAGTTGTGGTCTTAGTGACCGTCTTGTTGATCCTGAC
ATAAATGAGAACTACAACAAAGATGAGATGAAAACAATGATGTTTGCAGCACGGCTCTGC
CTCTTGCATTCATCTTCAAGGAGGCCAAAAATGAAAACAATCCTGCGTTTGTTTGAGGAG
CCAGAGCGCTGGTTAGAACTGCAGAGAAAGAGAGAAGAGCTTCTTGATGGAATTGGTTCA
GAAGATGAAAGTTGCTTGTGCAGATATTATGGATCAGATTCTGACGCAGGCATGTTCATA
GAGGATAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032461
PEP Infomation

pacid=37435868 transcript=PGSC0003DMT400047943 locus=PGSC0003DMG403018633 ID=PGSC0003DMT400047943.v4.03 annot-version=v4.03
Sequence

MFGSSSAKGGISSLLRCRGVPKAKRRTIVVGLKSDNSSREMLLRLLNLVVMPGDYVLSVH
VQEPNDTFDPNTFHIHEDLCKSKKVDFQIKVCAGETYINELSNQVRINFATMLAVGCSSS
RPSDQIAGKILKELPPTCSLLVMDNGGKILLQRPGTSQEGAPIKVFQSSESSLSVSSSST
QSRDKYQIQKSLSMTCSSTTTSSQPNRNATFPRNKKLNNATAKSLFQRIACLESMGCARR
FTTDELSCATDNFSPNLLTGVGGHSQVYRANLENGQLAAVKVLKNTRYAEDDLFQEVEIL
SNLKHENLIQLVGYSYSKDMQAIVYNLLKDSLKQRLKQLNWNTRMQVAIGVARGLEYLHS
QTPPIVHRDVKSSNILLSDDCHPQLSDFGAAVVHQETQQDSACVKPIHIVGTFGYLAPEY
IMYGKVDEKIDVYSYGVVLLELITGKRAIEKDLEAHHESLVLWARSLLSCGLSDRLVDPD
INENYNKDEMKTMMFAARLCLLHSSSRRPKMKTILRLFEEPERWLELQRKREELLDGIGS
EDESCLCRYYGSDSDAGMFIEDS*

Transcript Sequence

Transcript ID

PGSC0003DMT400047943
Transcript Infomation

pacid=37435868 locus=PGSC0003DMG403018633 ID=PGSC0003DMT400047943.v4.03 annot-version=v4.03
Sequence

ATGTTTGGTAGTTCAAGTGCCAAAGGAGGAATTTCCTCACTCCTGAGATGCAGGGGAGTT
CCCAAGGCCAAGAGGAGAACAATTGTGGTTGGTCTCAAATCCGATAACAGCAGCAGAGAA
ATGCTGCTTCGTTTGCTCAATTTAGTCGTAATGCCCGGGGACTATGTTCTGTCTGTTCAT
GTACAAGAACCAAATGATACATTTGATCCAAATACTTTTCACATTCATGAGGATCTATGT
AAATCCAAGAAGGTGGATTTTCAAATCAAGGTTTGTGCAGGAGAGACCTACATAAATGAG
TTGAGTAATCAAGTACGTATAAACTTTGCCACAATGCTTGCCGTAGGATGCAGCAGCTCC
AGGCCAAGTGATCAGATTGCTGGCAAAATTTTGAAAGAATTGCCTCCTACTTGCTCCCTT
CTAGTAATGGATAATGGAGGAAAAATCCTACTCCAGAGGCCGGGGACTTCCCAAGAAGGT
GCTCCCATTAAAGTTTTTCAATCATCTGAGTCCTCTCTGTCAGTGTCCAGCAGCTCTACA
CAGTCAAGAGACAAGTATCAGATTCAAAAATCTTTGTCAATGACATGTTCTTCAACGACA
ACTTCATCACAGCCGAATAGAAATGCAACTTTTCCTAGAAACAAGAAGCTCAATAATGCT
ACAGCTAAGAGTCTGTTTCAGAGAATAGCTTGCTTAGAATCAATGGGCTGCGCCAGACGC
TTCACAACGGATGAACTTAGCTGTGCAACAGACAACTTCAGTCCCAATTTATTGACCGGA
GTGGGTGGACATAGTCAAGTCTATCGAGCCAATCTCGAGAATGGCCAGCTTGCAGCAGTG
AAGGTCCTTAAAAACACACGATACGCCGAGGATGATCTTTTTCAGGAAGTTGAAATACTG
AGTAATCTGAAACACGAGAACTTAATTCAGCTTGTCGGTTACAGTTACAGTAAGGATATG
CAAGCAATCGTGTATAATCTACTGAAGGACAGTCTGAAGCAAAGACTAAAACAGCTTAAT
TGGAACACAAGGATGCAAGTTGCGATAGGAGTGGCAAGGGGATTGGAGTACCTCCATTCT
CAAACCCCTCCTATCGTTCACAGAGATGTGAAATCATCAAATATTCTCTTATCTGATGAT
TGCCACCCACAACTATCAGATTTTGGAGCAGCAGTGGTACACCAGGAAACTCAGCAAGAT
TCAGCTTGTGTGAAACCAATTCACATTGTTGGGACATTTGGATACCTGGCACCTGAGTAC
ATCATGTATGGCAAAGTTGATGAGAAGATAGATGTATACTCTTATGGGGTGGTTCTGCTA
GAATTGATCACAGGGAAACGAGCCATCGAAAAAGACTTGGAAGCTCATCATGAAAGCTTA
GTGTTGTGGGCAAGGTCTCTGCTCAGTTGTGGTCTTAGTGACCGTCTTGTTGATCCTGAC
ATAAATGAGAACTACAACAAAGATGAGATGAAAACAATGATGTTTGCAGCACGGCTCTGC
CTCTTGCATTCATCTTCAAGGAGGCCAAAAATGAAAACAATCCTGCGTTTGTTTGAGGAG
CCAGAGCGCTGGTTAGAACTGCAGAGAAAGAGAGAAGAGCTTCTTGATGGAATTGGTTCA
GAAGATGAAAGTTGCTTGTGCAGATATTATGGATCAGATTCTGACGCAGGCATGTTCATA
GAGGATAGCTGA