Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047920
CDS Infomation

pacid=37442840 polypeptide=PGSC0003DMP400032450 locus=PGSC0003DMG400018624 ID=PGSC0003DMT400047920.v4.03 annot-version=v4.03
Sequence

ATGGCAGCGAAGGCGAGGATTTTCGCTGGTCTTTTTCTTATTTGCATTGTCCTCCCTTCG
CTGGCCTCAGCATTTGTAGATCATCTACCTGAAGTTGGCCAAGTAAACGAGTTCGATAAC
AATGATGTACCGATCCATGTTAGTACTGTCACTCACTTCAGCGAAAAGCAAGTTAAGGAG
GCATTGATAAGAAGGGCAAAGGCAATGCATGATCTGTGGGCAAATTTTCGTTATAATGAT
AAGAATGCTGCACCTGAAGAAGATGCTGCACCTGTAACTCCAACGCCTGTTGATCCAACA
CCTGTGCCTGTTGACCCTGTTCCTGTTGATCCAACACCTAATCCTGTGCCTGTTAACCCT
GTTCCAGTTGATCCAACACCTAATCCTGTGCCTGCTAACAATGTGCCAGCAGGATATCCG
GGAGCAACTCAAGGGCCGCCTGTGGCAATGGGATATGGGGGTGCACCTATAACACAAAAT
CCATCAGACCAACAAACTGTGCCTGAACAGCCAGGTGCTGCTCAGAACCATCCAACACCG
GAAGAAATTAAAGAGAATCGCAAACATGCTGGATTGCAAGTGGGATTTTCCGATTACACT
TGCCCGAATGCTGAGAAGATTATTAAGGATGGAATGACCAGAGCTTTTGGGAATGATTCC
AGCATGGCTGCTCCAATTCCACGTCTTCTGTTCCATGATTGCTTTGTCAATGGATGTGAT
GCGTCTCTATTCTTAGACAAGACGCCAAGTGGTGCAAGGGTAGAGAAACTCGCCCCCTCC
AATGGTGCAACAGTTAGGGGATTTGAACTCATTGACGAGATCAAGGCTGACCTTGAGGCA
GAATGTCCTGGCATAGTCTCATGCTCTGATCTTTTGGTATACTTGTCAAGGGATGCCTTT
GTTGTATCAGGTGTCCCTTACTACGATGTGCCTGGTGGACGTCGTGATGGAATGGAATCC
CTTGAAGCAAATGTTCTTGGAAACCTCCCACTTCCTGATAGTACAGTGGACAAGATGATT
GACCTGTTTAAAAAGAAAGGTCTGAATGAAGAGGATTTGGTTGTCCTAATTGGTGCCCAC
TCCATTGGAGTAGCCCATTGTTTCAGCTTCCGTTACAGAGTGGATGATCCAGTGAAGGCT
ACTATGGTAGATCCAAGACTCGCTGGAGTTATGAAATTCACATGTACCAGCCCAATGAGT
ACTCTGGCTTTTGATACCACCACACAGTACAAGATGGACTCCATTTACTACAAACAGCTG
TCGGGGAAGAGAGCATTGCTTGAATCTGATGGACTTTTGAATGAAGATCCCAGAACAAAG
GACTTTATCCAGAAGTTTGGTGACGATGAAAAGGGATGGTTCACTAAGTTGGGTAAGGCC
ATGAACAAGTTGGCTTCAATACAAGTGCTCACGGGAGACCAGGGGCAGATCAGGAAACAA
TGCCGGTTTGTCAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400032450
PEP Infomation

pacid=37442840 transcript=PGSC0003DMT400047920 locus=PGSC0003DMG400018624 ID=PGSC0003DMT400047920.v4.03 annot-version=v4.03
Sequence

MAAKARIFAGLFLICIVLPSLASAFVDHLPEVGQVNEFDNNDVPIHVSTVTHFSEKQVKE
ALIRRAKAMHDLWANFRYNDKNAAPEEDAAPVTPTPVDPTPVPVDPVPVDPTPNPVPVNP
VPVDPTPNPVPANNVPAGYPGATQGPPVAMGYGGAPITQNPSDQQTVPEQPGAAQNHPTP
EEIKENRKHAGLQVGFSDYTCPNAEKIIKDGMTRAFGNDSSMAAPIPRLLFHDCFVNGCD
ASLFLDKTPSGARVEKLAPSNGATVRGFELIDEIKADLEAECPGIVSCSDLLVYLSRDAF
VVSGVPYYDVPGGRRDGMESLEANVLGNLPLPDSTVDKMIDLFKKKGLNEEDLVVLIGAH
SIGVAHCFSFRYRVDDPVKATMVDPRLAGVMKFTCTSPMSTLAFDTTTQYKMDSIYYKQL
SGKRALLESDGLLNEDPRTKDFIQKFGDDEKGWFTKLGKAMNKLASIQVLTGDQGQIRKQ
CRFVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400047920
Transcript Infomation

pacid=37442840 locus=PGSC0003DMG400018624 ID=PGSC0003DMT400047920.v4.03 annot-version=v4.03
Sequence

ATGGCAGCGAAGGCGAGGATTTTCGCTGGTCTTTTTCTTATTTGCATTGTCCTCCCTTCG
CTGGCCTCAGCATTTGTAGATCATCTACCTGAAGTTGGCCAAGTAAACGAGTTCGATAAC
AATGATGTACCGATCCATGTTAGTACTGTCACTCACTTCAGCGAAAAGCAAGTTAAGGAG
GCATTGATAAGAAGGGCAAAGGCAATGCATGATCTGTGGGCAAATTTTCGTTATAATGAT
AAGAATGCTGCACCTGAAGAAGATGCTGCACCTGTAACTCCAACGCCTGTTGATCCAACA
CCTGTGCCTGTTGACCCTGTTCCTGTTGATCCAACACCTAATCCTGTGCCTGTTAACCCT
GTTCCAGTTGATCCAACACCTAATCCTGTGCCTGCTAACAATGTGCCAGCAGGATATCCG
GGAGCAACTCAAGGGCCGCCTGTGGCAATGGGATATGGGGGTGCACCTATAACACAAAAT
CCATCAGACCAACAAACTGTGCCTGAACAGCCAGGTGCTGCTCAGAACCATCCAACACCG
GAAGAAATTAAAGAGAATCGCAAACATGCTGGATTGCAAGTGGGATTTTCCGATTACACT
TGCCCGAATGCTGAGAAGATTATTAAGGATGGAATGACCAGAGCTTTTGGGAATGATTCC
AGCATGGCTGCTCCAATTCCACGTCTTCTGTTCCATGATTGCTTTGTCAATGGATGTGAT
GCGTCTCTATTCTTAGACAAGACGCCAAGTGGTGCAAGGGTAGAGAAACTCGCCCCCTCC
AATGGTGCAACAGTTAGGGGATTTGAACTCATTGACGAGATCAAGGCTGACCTTGAGGCA
GAATGTCCTGGCATAGTCTCATGCTCTGATCTTTTGGTATACTTGTCAAGGGATGCCTTT
GTTGTATCAGGTGTCCCTTACTACGATGTGCCTGGTGGACGTCGTGATGGAATGGAATCC
CTTGAAGCAAATGTTCTTGGAAACCTCCCACTTCCTGATAGTACAGTGGACAAGATGATT
GACCTGTTTAAAAAGAAAGGTCTGAATGAAGAGGATTTGGTTGTCCTAATTGGTGCCCAC
TCCATTGGAGTAGCCCATTGTTTCAGCTTCCGTTACAGAGTGGATGATCCAGTGAAGGCT
ACTATGGTAGATCCAAGACTCGCTGGAGTTATGAAATTCACATGTACCAGCCCAATGAGT
ACTCTGGCTTTTGATACCACCACACAGTACAAGATGGACTCCATTTACTACAAACAGCTG
TCGGGGAAGAGAGCATTGCTTGAATCTGATGGACTTTTGAATGAAGATCCCAGAACAAAG
GACTTTATCCAGAAGTTTGGTGACGATGAAAAGGGATGGTTCACTAAGTTGGGTAAGGCC
ATGAACAAGTTGGCTTCAATACAAGTGCTCACGGGAGACCAGGGGCAGATCAGGAAACAA
TGCCGGTTTGTCAACTAA