Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047869
CDS Infomation

pacid=37444252 polypeptide=PGSC0003DMP400032416 locus=PGSC0003DMG400018604 ID=PGSC0003DMT400047869.v4.03 annot-version=v4.03
Sequence

ATGACTTCTTCCTACTCTTTATCTTCTATTAGAAACTCTACTAAATTTGTAGCTAACAAT
TCTAATCTTTTCTTTCCAAGACAGAGGCTTTGTGTGTTTACCAATGAAACTCAGTTTCCC
AAGAAAGATTTTCTTGTACTCAAGCCTCAGACATGTTCTTTTTCATTTTTGAGACTGAAA
AAATCCAGCTTTACACACCCTTTTGCTGCGTTATCATCTTTTGCCGAATCAGATGATGAA
AAAGGTGAGAACTTTGAAGTCAAATCCCACCAAGAAAAAGCTATTTCCTCTGAGAATGAA
GATGAGTTACCTGGAATGGCACAAGCTTTTAATATATCTTCAAGTACAGCTTCTGCTGTA
GCAATATGCATTGCATTAGCTGCACTGATTTTGCCATTTTTCATGAAGTCTTTGGGTCAA
GGATTGGGATTGAAGTACAAGATTTTGTCTTATGTAACAATCTTGTTTGGTTTTTACATG
GCTTGGAATATTGGAGCTAATGATGTGGCAAATGCCATGGGAACTTCTGTTGGTTCAGGG
GCATTGAGTCTCCGACAAGCCGTTGTCATGGCTGGGGTTCTTGAATTTTCAGGGGCATTG
TTAATGGGAACACATGTTACTAATACAATGCAGAAGGGTATTCTTGTGACTAATGTTTTC
CAAGGAAAAGATACTTTACTATTTGCTGGCCTGCTTTCTTCTTTGGCTGCTGCAGGGACA
TGGTTGCAGGTTGCATCATATTATGGTTTGCCAGTATCCACAACACATTGTATTGTAGGA
TCCATGGTTGGTTTTGGTCTTGTTTATGGGGGAACTGGTGCAGTCTTTTGGAGTTCACTG
GCAAGGGTGATTTCCTCTTGGGTGATCTCACCTTTACTGGGAGCAGTGGTGTCCTTTCTC
GTGTACAAATGCATACGGAGGTTTGTGTACAGTGCTCGGAACCCAGGAAAAGCGGCTGCA
ACAGCTGCACCAATTTCTGTCTTTCTTGGTGTCACTGGAATCTCTTTCATAGCTCTCCCT
CTGAGCAAGACTTTGAATCTAGCTCTTGGCCAGGCTATAACCTGTGGCGCCATTAGTGCA
TTTGCAGTTGACAGGATCATCCGGGGCCAACTTGGCCACCTCCTGGCCAGAGCCAGTTCA
AAAGAACCAGAACCAGAACCAGAAACTACTGACACTAAAAACATTGGATTTCTTTCAGAT
ATTGCAGGTCCTAAAGGAACACAACTGAAAATAGTTTATGGTGTTTTTGGCTACATGCAA
GTCTTATCAGCCTGCTTCATGTCATTTGCTCATGGTGGAAATGATGTCTCCAATGCAATA
GGGCCATTGGCTTCAGCATTATCCATTCTTCAGGGTGGGCTCAGTGCAGCCGATATTGTT
ATTCCAAATGATGTTCTAGCATGGGGAGGCTTTGGAATTGTGGCAGGGCTAACAATGTGG
GGCTACAGAGTGATTGCAACTATTGGAAAGAAGATAACAGAATTAACACCCACCAGGGGA
TTTGCAGCTGAGTTTGCAGCCGCATCTGTGGTTTTGTGCGCATCCAAGCTGGGCTTACCA
ATCTCAGGCACACATACCTTGGTGGGAGCAGTCATGGGAGTTGGTTTCGCTCGAGGATTT
AACAGTGTAAGAGCAGAGACAGTAAGAGAGATTGCAACTTCCTGGGCAGTGACAATTCCG
GCTGGTGCTACCTTTGCTGTTATTTACACATGGATATTCACTAAGCTCTTGTCATACTTA
CTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032416
PEP Infomation

pacid=37444252 transcript=PGSC0003DMT400047869 locus=PGSC0003DMG400018604 ID=PGSC0003DMT400047869.v4.03 annot-version=v4.03
Sequence

MTSSYSLSSIRNSTKFVANNSNLFFPRQRLCVFTNETQFPKKDFLVLKPQTCSFSFLRLK
KSSFTHPFAALSSFAESDDEKGENFEVKSHQEKAISSENEDELPGMAQAFNISSSTASAV
AICIALAALILPFFMKSLGQGLGLKYKILSYVTILFGFYMAWNIGANDVANAMGTSVGSG
ALSLRQAVVMAGVLEFSGALLMGTHVTNTMQKGILVTNVFQGKDTLLFAGLLSSLAAAGT
WLQVASYYGLPVSTTHCIVGSMVGFGLVYGGTGAVFWSSLARVISSWVISPLLGAVVSFL
VYKCIRRFVYSARNPGKAAATAAPISVFLGVTGISFIALPLSKTLNLALGQAITCGAISA
FAVDRIIRGQLGHLLARASSKEPEPEPETTDTKNIGFLSDIAGPKGTQLKIVYGVFGYMQ
VLSACFMSFAHGGNDVSNAIGPLASALSILQGGLSAADIVIPNDVLAWGGFGIVAGLTMW
GYRVIATIGKKITELTPTRGFAAEFAAASVVLCASKLGLPISGTHTLVGAVMGVGFARGF
NSVRAETVREIATSWAVTIPAGATFAVIYTWIFTKLLSYLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400047869
Transcript Infomation

pacid=37444252 locus=PGSC0003DMG400018604 ID=PGSC0003DMT400047869.v4.03 annot-version=v4.03
Sequence

ATGACTTCTTCCTACTCTTTATCTTCTATTAGAAACTCTACTAAATTTGTAGCTAACAAT
TCTAATCTTTTCTTTCCAAGACAGAGGCTTTGTGTGTTTACCAATGAAACTCAGTTTCCC
AAGAAAGATTTTCTTGTACTCAAGCCTCAGACATGTTCTTTTTCATTTTTGAGACTGAAA
AAATCCAGCTTTACACACCCTTTTGCTGCGTTATCATCTTTTGCCGAATCAGATGATGAA
AAAGGTGAGAACTTTGAAGTCAAATCCCACCAAGAAAAAGCTATTTCCTCTGAGAATGAA
GATGAGTTACCTGGAATGGCACAAGCTTTTAATATATCTTCAAGTACAGCTTCTGCTGTA
GCAATATGCATTGCATTAGCTGCACTGATTTTGCCATTTTTCATGAAGTCTTTGGGTCAA
GGATTGGGATTGAAGTACAAGATTTTGTCTTATGTAACAATCTTGTTTGGTTTTTACATG
GCTTGGAATATTGGAGCTAATGATGTGGCAAATGCCATGGGAACTTCTGTTGGTTCAGGG
GCATTGAGTCTCCGACAAGCCGTTGTCATGGCTGGGGTTCTTGAATTTTCAGGGGCATTG
TTAATGGGAACACATGTTACTAATACAATGCAGAAGGGTATTCTTGTGACTAATGTTTTC
CAAGGAAAAGATACTTTACTATTTGCTGGCCTGCTTTCTTCTTTGGCTGCTGCAGGGACA
TGGTTGCAGGTTGCATCATATTATGGTTTGCCAGTATCCACAACACATTGTATTGTAGGA
TCCATGGTTGGTTTTGGTCTTGTTTATGGGGGAACTGGTGCAGTCTTTTGGAGTTCACTG
GCAAGGGTGATTTCCTCTTGGGTGATCTCACCTTTACTGGGAGCAGTGGTGTCCTTTCTC
GTGTACAAATGCATACGGAGGTTTGTGTACAGTGCTCGGAACCCAGGAAAAGCGGCTGCA
ACAGCTGCACCAATTTCTGTCTTTCTTGGTGTCACTGGAATCTCTTTCATAGCTCTCCCT
CTGAGCAAGACTTTGAATCTAGCTCTTGGCCAGGCTATAACCTGTGGCGCCATTAGTGCA
TTTGCAGTTGACAGGATCATCCGGGGCCAACTTGGCCACCTCCTGGCCAGAGCCAGTTCA
AAAGAACCAGAACCAGAACCAGAAACTACTGACACTAAAAACATTGGATTTCTTTCAGAT
ATTGCAGGTCCTAAAGGAACACAACTGAAAATAGTTTATGGTGTTTTTGGCTACATGCAA
GTCTTATCAGCCTGCTTCATGTCATTTGCTCATGGTGGAAATGATGTCTCCAATGCAATA
GGGCCATTGGCTTCAGCATTATCCATTCTTCAGGGTGGGCTCAGTGCAGCCGATATTGTT
ATTCCAAATGATGTTCTAGCATGGGGAGGCTTTGGAATTGTGGCAGGGCTAACAATGTGG
GGCTACAGAGTGATTGCAACTATTGGAAAGAAGATAACAGAATTAACACCCACCAGGGGA
TTTGCAGCTGAGTTTGCAGCCGCATCTGTGGTTTTGTGCGCATCCAAGCTGGGCTTACCA
ATCTCAGGCACACATACCTTGGTGGGAGCAGTCATGGGAGTTGGTTTCGCTCGAGGATTT
AACAGTGTAAGAGCAGAGACAGTAAGAGAGATTGCAACTTCCTGGGCAGTGACAATTCCG
GCTGGTGCTACCTTTGCTGTTATTTACACATGGATATTCACTAAGCTCTTGTCATACTTA
CTCTGA