Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047866
CDS Infomation

pacid=37443175 polypeptide=PGSC0003DMP400032413 locus=PGSC0003DMG401018603 ID=PGSC0003DMT400047866.v4.03 annot-version=v4.03
Sequence

ATGAAGTTTATGAAACTTGGATCTAGGCCTGACACTTTCATTACTACTGAGGCTGTAAGG
TCAGTTAATTCTGAAGTTGTTAGTGATCTTATAGTTCAAGTAAAGGGTAGTAGATATTTG
CTTCACAAGTTTCCTCTGCTGTCAAAGTGTTCAAGGCTACAGAGGCTATGTTCTGAAAGT
CCAGAAACTTCCCAGCACCAAATTGTGCAGCTACCAGATTTTCCAGGTGGAATTGAGGCA
TTTGAGCTATGTGCAAAGTTCTGTTATGGAATTACCATCACTCTAAGTGCTTACAACATT
GTCGCGGCTCGTTGTGCTGCAGAGTATCTGCAGATGACAGAGGATGTAGAGAAAGGAAAC
TTGATTTACAAACTCGAAGTGTTTTTCAATTCTTGCATACTTTCAGGTTGGAAAGACTCA
ATTGTGACATTACAAAGTACAAAGTCTTACCCTTTATGGTCTGAGGATTTGGTAATTACA
AGCAGATGTATTGAAGCTATTGCTTCGAAAGTTTTAGCTCATCCTTCAAAGGTTAATTTG
TCAAGAACCTACTCGAGAAGAGGCCCGAGGGATGATATTTCTTGCATTGAATCCGATAGC
AGAAGACATAATAAAGATTCATCTAAAATTTGGTGGGCTGAAGATTTAGCTGAATTGAGC
ATAGACCTTTATTGGAGAAGTATGATAGCTATCAAATCTGGTGGGAAAGTACCTGCTCCT
GTTATTGGTGATGCATTGAGAATTTACGCCTCAAGATGGTTACCAAACATTTCAAAGTAT
GCAAATCTTGAGAAGCAGATAGTACATGATCAATCCGAATCGGATTCAATTGGAAAACAC
AGGCTGCTTTTGGAGTCAATAATCAGCTTGTTACCAGCTGAAAAGGGGGCAGTTTCTTGT
AGTTTCTTGTTGAAACTACTTAAAGCAACTAACATATTGAAAGGTTCTTGTTCATCTAAA
ATGGAATTGGCAAGAAGGGTTGGACTTCAATTAGAAGATGCTAGTGTTAATGATCTGTTA
ATACCTTGTGTGTCACACACATGTGACACAATTTATGATGTGGATATAGTTATTACCATA
TTACAACAGTTCATGTTGCAGGTTCAAAGTCCTCCAACAAGTCCACTAAGAAGGAGAGGA
GATTTTGAGAGGAGAAGGTCTCGATCTGCGGAGAATATTGACCTTGAGTTTCAAGAAAGT
AGAAGATCTTCTTCAGCATCACATAGCTCAAAACTCAAGGTAGCTAAGCTTGTCGATGGA
TATCTTCAAGAAATTGCTAGTGACACAAATTTGCCCCTATCAAAATTCATATCCATTGCT
GAAGCAATCCCAGGATTCGCCAGGCTTGACCATGATGATCTTTACAAAGCCATCGACATC
TATCTCAAGGGGCATCCAGGGCTGAACAAGAACGAAAGAAAGCGCCTTTGCAGGATATTA
GACTGCAAGAAACTATCAATGGATGTTTGTATGCATGCTGCACAAAATGAATTACTTCCA
CTAAGGGTAGTTGTTCAAGTTCTTTTTTTCGAGCAAGCTAGAACCGCGATGTCTGGTGGT
CATGTAACAGAGTTGCCTAGTAACATAAAAGCACTTCTAGCAAACCATGATGACACAGCC
AAGACTTCAGCATCTTTTAACAAGGCCAAAATGACACCAGTTAATGACCAGTGGAGTAAT
GCATCAGGCCTAAAATCTCCAAAGTCGAACATTTCAACTCTGAAAATGAAGCTAGCTGAA
GATGATGATTTGGATGAACATAATGCAGATGAAATTGGAAAATCTTCAAGAATTAAAGCT
TTATGTGTTCTTCCAAATCGACCGAAAAAAATGTTCAGTAAGTTATGGTCAAACAATAGA
TCATCAGTTGCAAGTGAAAAGAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032413
PEP Infomation

pacid=37443175 transcript=PGSC0003DMT400047866 locus=PGSC0003DMG401018603 ID=PGSC0003DMT400047866.v4.03 annot-version=v4.03
Sequence

MKFMKLGSRPDTFITTEAVRSVNSEVVSDLIVQVKGSRYLLHKFPLLSKCSRLQRLCSES
PETSQHQIVQLPDFPGGIEAFELCAKFCYGITITLSAYNIVAARCAAEYLQMTEDVEKGN
LIYKLEVFFNSCILSGWKDSIVTLQSTKSYPLWSEDLVITSRCIEAIASKVLAHPSKVNL
SRTYSRRGPRDDISCIESDSRRHNKDSSKIWWAEDLAELSIDLYWRSMIAIKSGGKVPAP
VIGDALRIYASRWLPNISKYANLEKQIVHDQSESDSIGKHRLLLESIISLLPAEKGAVSC
SFLLKLLKATNILKGSCSSKMELARRVGLQLEDASVNDLLIPCVSHTCDTIYDVDIVITI
LQQFMLQVQSPPTSPLRRRGDFERRRSRSAENIDLEFQESRRSSSASHSSKLKVAKLVDG
YLQEIASDTNLPLSKFISIAEAIPGFARLDHDDLYKAIDIYLKGHPGLNKNERKRLCRIL
DCKKLSMDVCMHAAQNELLPLRVVVQVLFFEQARTAMSGGHVTELPSNIKALLANHDDTA
KTSASFNKAKMTPVNDQWSNASGLKSPKSNISTLKMKLAEDDDLDEHNADEIGKSSRIKA
LCVLPNRPKKMFSKLWSNNRSSVASEKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400047866
Transcript Infomation

pacid=37443175 locus=PGSC0003DMG401018603 ID=PGSC0003DMT400047866.v4.03 annot-version=v4.03
Sequence

ATGAAGTTTATGAAACTTGGATCTAGGCCTGACACTTTCATTACTACTGAGGCTGTAAGG
TCAGTTAATTCTGAAGTTGTTAGTGATCTTATAGTTCAAGTAAAGGGTAGTAGATATTTG
CTTCACAAGTTTCCTCTGCTGTCAAAGTGTTCAAGGCTACAGAGGCTATGTTCTGAAAGT
CCAGAAACTTCCCAGCACCAAATTGTGCAGCTACCAGATTTTCCAGGTGGAATTGAGGCA
TTTGAGCTATGTGCAAAGTTCTGTTATGGAATTACCATCACTCTAAGTGCTTACAACATT
GTCGCGGCTCGTTGTGCTGCAGAGTATCTGCAGATGACAGAGGATGTAGAGAAAGGAAAC
TTGATTTACAAACTCGAAGTGTTTTTCAATTCTTGCATACTTTCAGGTTGGAAAGACTCA
ATTGTGACATTACAAAGTACAAAGTCTTACCCTTTATGGTCTGAGGATTTGGTAATTACA
AGCAGATGTATTGAAGCTATTGCTTCGAAAGTTTTAGCTCATCCTTCAAAGGTTAATTTG
TCAAGAACCTACTCGAGAAGAGGCCCGAGGGATGATATTTCTTGCATTGAATCCGATAGC
AGAAGACATAATAAAGATTCATCTAAAATTTGGTGGGCTGAAGATTTAGCTGAATTGAGC
ATAGACCTTTATTGGAGAAGTATGATAGCTATCAAATCTGGTGGGAAAGTACCTGCTCCT
GTTATTGGTGATGCATTGAGAATTTACGCCTCAAGATGGTTACCAAACATTTCAAAGTAT
GCAAATCTTGAGAAGCAGATAGTACATGATCAATCCGAATCGGATTCAATTGGAAAACAC
AGGCTGCTTTTGGAGTCAATAATCAGCTTGTTACCAGCTGAAAAGGGGGCAGTTTCTTGT
AGTTTCTTGTTGAAACTACTTAAAGCAACTAACATATTGAAAGGTTCTTGTTCATCTAAA
ATGGAATTGGCAAGAAGGGTTGGACTTCAATTAGAAGATGCTAGTGTTAATGATCTGTTA
ATACCTTGTGTGTCACACACATGTGACACAATTTATGATGTGGATATAGTTATTACCATA
TTACAACAGTTCATGTTGCAGGTTCAAAGTCCTCCAACAAGTCCACTAAGAAGGAGAGGA
GATTTTGAGAGGAGAAGGTCTCGATCTGCGGAGAATATTGACCTTGAGTTTCAAGAAAGT
AGAAGATCTTCTTCAGCATCACATAGCTCAAAACTCAAGGTAGCTAAGCTTGTCGATGGA
TATCTTCAAGAAATTGCTAGTGACACAAATTTGCCCCTATCAAAATTCATATCCATTGCT
GAAGCAATCCCAGGATTCGCCAGGCTTGACCATGATGATCTTTACAAAGCCATCGACATC
TATCTCAAGGGGCATCCAGGGCTGAACAAGAACGAAAGAAAGCGCCTTTGCAGGATATTA
GACTGCAAGAAACTATCAATGGATGTTTGTATGCATGCTGCACAAAATGAATTACTTCCA
CTAAGGGTAGTTGTTCAAGTTCTTTTTTTCGAGCAAGCTAGAACCGCGATGTCTGGTGGT
CATGTAACAGAGTTGCCTAGTAACATAAAAGCACTTCTAGCAAACCATGATGACACAGCC
AAGACTTCAGCATCTTTTAACAAGGCCAAAATGACACCAGTTAATGACCAGTGGAGTAAT
GCATCAGGCCTAAAATCTCCAAAGTCGAACATTTCAACTCTGAAAATGAAGCTAGCTGAA
GATGATGATTTGGATGAACATAATGCAGATGAAATTGGAAAATCTTCAAGAATTAAAGCT
TTATGTGTTCTTCCAAATCGACCGAAAAAAATGTTCAGTAAGTTATGGTCAAACAATAGA
TCATCAGTTGCAAGTGAAAAGAATTGA