Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047833
CDS Infomation

pacid=37466537 polypeptide=PGSC0003DMP400032390 locus=PGSC0003DMG400018590 ID=PGSC0003DMT400047833.v4.03 annot-version=v4.03
Sequence

ATGGCGGCAGATACTGTAACGAACCTTGAACCGATTCATACCTTCTTCAACAACCTCGAA
GCTCGACAGACCTTACTCACCACCATAACTGACCTCAACAAAGCCCTAACCACCCATTTC
ACCAACATAAACAATACTCTCTGTCAAAAATCGGAAACCCTCGATACTCATGTCAAAATT
TTCAAGGATAAGACGGAAGATGCATTACTGAAGATACAGAATCGAGAGAATGCCTTACCC
GATCGGGAATCGAGCATGGGTGCTCGGATTGTGGAGATGAAGGATGCTGCTATCTCTGAG
ATTGAGAGTTTGGGGGATTTAAGCGAGAAAAGCTTGGCTGAAGTGTTGAGGAGTTACTGT
AAGAGAATGGATGCTAGCGGCCTTGTTGGATTTATTCAGACTAAGAGGAAGGAGCCTACG
GGTTTGAGGATGGAGATTGCTGCTGCACTTGAAAGTTCTGTGGATCCAATGAGGTTGATC
TTGGATGCAGCAGAGGAGTTTGTGGGGAGGAAGGTAGAGAAGAAAGCGATACTGGCAGAT
AGGAGGTGGGCTTGTGATATGTTAATTCAGTCAGTTGTGCCAGCTGCGGAAGGGGGTTAT
GGTGCAGGGAGGAGTTTGAAGGAGAGGGCAGCAAGGGTGTTGGAGAAATGGAAGGGAGTT
TTGGGCGGTGGGGACAGAAGCAGTGGAGTTTGCGCTGCTGAAGCAACAATGTTTTTGCAG
TTGGTTATCGCATTTGCGCTAAAAGAGAGGTTTGAGGAGGAGTTCCTTAGGAAGCTGGTG
CTGGAGTTTGCTAACAGGAAAGATATGCCAAAGCTTGCCGTTGCCTTTGGATTTGGTAAC
AAAATAGGAGATATTATTGAAGAGCTGTTGAAGAGCGGCAAAGAGGTTGAAGCAGTTTAT
TTTGCTACAGAGTCTGGATTATCAGAGAGATACCCTCCACTCTCACTTCTTAAGTTATCT
CTCAGGAACTGCCGAAGAAATGCTAATAACATATCAAAGAAGGGAAAATTTAGTTCAGCT
GCAGTGGACAAAGCTAACAGCATAGAGTTGGAAGCTACTAAGGCTTTAATAAAATGTGTG
GAAGATCACAAGCTTGAACAAGAATTTACTTTAGAAGGACTTAAACAACGGGTAACTGAG
TTGGAGCAGGCCAAAGCAAAAAAGAAAATGGGCACAACTCCTGAGAACAAGCCTTCAAAA
AAGCGGGGTCGTGGAGGTGGCACTGGCAGGTCCAGTGGCCCGTCCACCTCTCGGCCTGTT
AAATCTGGAAGATCGTCAAATGCCACAGCTTTCCGCTCCAGGAATCCTCCTCAATCACAT
CAGGCTCCACCAATTAGGTATACAGGGGCACATAGCTACACCAGCCAGAGTGTATATGAA
GCACCTAGCACGGTCTCATATGCTCCAGTTTATAGCGGTACTCACACTCAAAGTCCGGCT
ATACTTGCTCCACAATATGGATATGCACTTCAAGAAGCTGGAGTTAGTGGAGTGCGGAGT
TATCATGGATCATATGGAGGGGAGGCTGGTTATAGTGCATATGATTATGCTCTCACTCCT
GCGGCGCCTGCATACCCACCTTCATACCCCCCACAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400032390
PEP Infomation

pacid=37466537 transcript=PGSC0003DMT400047833 locus=PGSC0003DMG400018590 ID=PGSC0003DMT400047833.v4.03 annot-version=v4.03
Sequence

MAADTVTNLEPIHTFFNNLEARQTLLTTITDLNKALTTHFTNINNTLCQKSETLDTHVKI
FKDKTEDALLKIQNRENALPDRESSMGARIVEMKDAAISEIESLGDLSEKSLAEVLRSYC
KRMDASGLVGFIQTKRKEPTGLRMEIAAALESSVDPMRLILDAAEEFVGRKVEKKAILAD
RRWACDMLIQSVVPAAEGGYGAGRSLKERAARVLEKWKGVLGGGDRSSGVCAAEATMFLQ
LVIAFALKERFEEEFLRKLVLEFANRKDMPKLAVAFGFGNKIGDIIEELLKSGKEVEAVY
FATESGLSERYPPLSLLKLSLRNCRRNANNISKKGKFSSAAVDKANSIELEATKALIKCV
EDHKLEQEFTLEGLKQRVTELEQAKAKKKMGTTPENKPSKKRGRGGGTGRSSGPSTSRPV
KSGRSSNATAFRSRNPPQSHQAPPIRYTGAHSYTSQSVYEAPSTVSYAPVYSGTHTQSPA
ILAPQYGYALQEAGVSGVRSYHGSYGGEAGYSAYDYALTPAAPAYPPSYPPQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400047833
Transcript Infomation

pacid=37466537 locus=PGSC0003DMG400018590 ID=PGSC0003DMT400047833.v4.03 annot-version=v4.03
Sequence

ATGGCGGCAGATACTGTAACGAACCTTGAACCGATTCATACCTTCTTCAACAACCTCGAA
GCTCGACAGACCTTACTCACCACCATAACTGACCTCAACAAAGCCCTAACCACCCATTTC
ACCAACATAAACAATACTCTCTGTCAAAAATCGGAAACCCTCGATACTCATGTCAAAATT
TTCAAGGATAAGACGGAAGATGCATTACTGAAGATACAGAATCGAGAGAATGCCTTACCC
GATCGGGAATCGAGCATGGGTGCTCGGATTGTGGAGATGAAGGATGCTGCTATCTCTGAG
ATTGAGAGTTTGGGGGATTTAAGCGAGAAAAGCTTGGCTGAAGTGTTGAGGAGTTACTGT
AAGAGAATGGATGCTAGCGGCCTTGTTGGATTTATTCAGACTAAGAGGAAGGAGCCTACG
GGTTTGAGGATGGAGATTGCTGCTGCACTTGAAAGTTCTGTGGATCCAATGAGGTTGATC
TTGGATGCAGCAGAGGAGTTTGTGGGGAGGAAGGTAGAGAAGAAAGCGATACTGGCAGAT
AGGAGGTGGGCTTGTGATATGTTAATTCAGTCAGTTGTGCCAGCTGCGGAAGGGGGTTAT
GGTGCAGGGAGGAGTTTGAAGGAGAGGGCAGCAAGGGTGTTGGAGAAATGGAAGGGAGTT
TTGGGCGGTGGGGACAGAAGCAGTGGAGTTTGCGCTGCTGAAGCAACAATGTTTTTGCAG
TTGGTTATCGCATTTGCGCTAAAAGAGAGGTTTGAGGAGGAGTTCCTTAGGAAGCTGGTG
CTGGAGTTTGCTAACAGGAAAGATATGCCAAAGCTTGCCGTTGCCTTTGGATTTGGTAAC
AAAATAGGAGATATTATTGAAGAGCTGTTGAAGAGCGGCAAAGAGGTTGAAGCAGTTTAT
TTTGCTACAGAGTCTGGATTATCAGAGAGATACCCTCCACTCTCACTTCTTAAGTTATCT
CTCAGGAACTGCCGAAGAAATGCTAATAACATATCAAAGAAGGGAAAATTTAGTTCAGCT
GCAGTGGACAAAGCTAACAGCATAGAGTTGGAAGCTACTAAGGCTTTAATAAAATGTGTG
GAAGATCACAAGCTTGAACAAGAATTTACTTTAGAAGGACTTAAACAACGGGTAACTGAG
TTGGAGCAGGCCAAAGCAAAAAAGAAAATGGGCACAACTCCTGAGAACAAGCCTTCAAAA
AAGCGGGGTCGTGGAGGTGGCACTGGCAGGTCCAGTGGCCCGTCCACCTCTCGGCCTGTT
AAATCTGGAAGATCGTCAAATGCCACAGCTTTCCGCTCCAGGAATCCTCCTCAATCACAT
CAGGCTCCACCAATTAGGTATACAGGGGCACATAGCTACACCAGCCAGAGTGTATATGAA
GCACCTAGCACGGTCTCATATGCTCCAGTTTATAGCGGTACTCACACTCAAAGTCCGGCT
ATACTTGCTCCACAATATGGATATGCACTTCAAGAAGCTGGAGTTAGTGGAGTGCGGAGT
TATCATGGATCATATGGAGGGGAGGCTGGTTATAGTGCATATGATTATGCTCTCACTCCT
GCGGCGCCTGCATACCCACCTTCATACCCCCCACAGTAG