Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047813
CDS Infomation

pacid=37466546 polypeptide=PGSC0003DMP400032378 locus=PGSC0003DMG401018585 ID=PGSC0003DMT400047813.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAGTAACAAAGCAGTGGAAGAAAATAATCACAAAAGTGATACTAATACTCCT
GTGCCTAAAGCCTTGGGATCGTTCATACAAATTGAATCAATATCTATAGACCTTGATATT
CCTATGCCGAAGAAAGAGGAAGGAAAATGTCAACATTATTTCTCTATACGTGGATATGTT
GCTGAGAAAAGAGAAAAAGACCGGAGAATTTGTGCACCTTTTACGTCAAGCGGTGACCGC
AGTATTTCTGAGGAGCAACTTCCTCCTCCTCCTCTGGATGTTCCCAAATTTAGGTGGTGG
CGATGCAAAAATTGCATGCGCGAGATTGGCACAGAAAGTTCAGGAGAAGAGATTGAGATT
CTTCCTCCAAGCTGCAGAAGTAGATTGATCTCTCCAAATATGGTTTCTTCTAGAAATGCT
ACAACAAATGCATTGTTAGAGATGAAGCATGATTCAACTTCACGAAAGGTTGACAAAAAG
AAAGCTATTATCGTTGATGCTGCCAATACCAGTGGCTATGACTTCTTATGTAAACCTTAC
AAAGGAAGGTGCACTATGGTTGAAGACAAAGCTGTCTCAGCTGGTAACAGAACTGGTTCA
GGAAATGTTAGAAATGAGGAGATCAGATATCCAACTATTGAGGTAGCAATAGCTAAACAT
TGCTCAAGCAAAGAAATAGATAGAAAGAGCCCTGCTGCTAATCTGTCAAACAACGTCATA
CGAGTTGCAAGCTCTGAATCAACTCTGTCAGAGGGTAAAATTGTTCCCCATGGAAATCTC
TACATAAGTGCTGATGATGTAAGTCCTGATATTGGTGCAGAGACAGCAATGGGTTCTCCA
AATGACGATCAGAGGACAGTCTCAACAGCTTTTAAGCAATCTGATATACCAGATACTACT
GATAATGCTCTTGAAACCAGTAAAACAAAACTGAGTAGGTTACCTTCCATTGAATTGAGA
GACCAGAATGGAATATCTCCAGGAAGCGACCCACTCATGGCTAAAAATAGACAGTTTGAT
TCACACAATGATGTTCCAAATGATGTACCACGCCGGAAAACTCGAAAGGTGCGTCTGTTG
ACTGATATATTGGGTGGAAAAGTCAATTTGGAGAGTAATCCTGCCAAAGCAGATCGTAAT
TCATTGAGTACCAAGACTGTGGTGCCTCCTGAACTAGAACCAGTTGGTATGCCAAAGGAT
AAGAGATACTTTCAGAAGAAGAGGAAGATTCCTCAAGAAGTTGACAGCAATCTGTCGGGT
ATGGGAATACAATGCAACATTGGTAAAAGGGTCAGGTCATCTAATGGAGGAGTTGAGAGG
AGTTCCATAGCAGTTGAAACTGCTGATTCACGTTCAGATGAGAAGGAATCTGGTGAAGAA
GGTATACCGAATGGTAACAAAAATCTGCGAATCAAGCATAGAAATGGAATAAATAAAAAG
AAAAATAAGCAGTTTCGACCTGTCGATGGATATTCCCCTGAAATGCGCTGGCAGGATATA
ACCATGGAAAATGGAGGTTTAAAGGGATATAGTGCTGTTAATAGCCTCGTTCATCCAGTG
CAACATTCTTCCATGGGTGGGAAATTTGAACCTCATTTAAGTAGTTATCAGTCATTGGTA
GGAACAGGTAGAGGTTCTGGCTTGTGTTGGAAAAGTAGTAAGTTTCCTGAAGTTGGACGT
GTTCCCTCAACTCTTATGCATCCTAACAATAATTTCCCGGGGGAAAGTTCAACCAGGAGG
AATCATCTCATACCAGTGACCAGTGGTATCGAAATGATGACCTTTCAGCCAGCACGTGAA
TTATCTGCTAAAGTAGGGCTAGACCTGTCTTTGAACAGCTTCAGAGATCCCGACATACAT
GCGGGGAATGATATTACCCAAAGCAAAAATATGACAAGCTGGCCATTCATTCTCCAGAAG
GGATCGAATGGTGATATTCCTCGAAGGAAAGATAATTCTTATGTCAGACAGTCGAACGTT
CCTGAAGCAGGTCAATCTTCAAGGAAAGAAGTGATATATGACCTCAACCAGGGAGTTCCG
CAGACAGCATCTATGTGGAAAGATATCCAAAGCTCTCCAATTCTACTTCAGAAGGGGAAT
CTTCAAATTTCTGAGATAATGGAAACGCCTCGCCAGCATAACAAAGAAAATCTTAATGAA
TTTCTAGAGCATTCAGAGGCAATTAAGCATCGCAGATATCAACATTCTGAGAAGACTTTA
GAACGAGGGTTGTCAGATGATATACCAATGGAAATTGTGGAGTTAATGGCGAAGAACCAG
TACGAGAGAGGTCTTACTGAGACCAGAACCAAATGCATGAGTGAAAGGACTGCTGGTTTT
GCAAGGCCATATACTGAAATACATGAGAGTGAAGCAGTGGCGTTGTCACATGGTGTACCT
AGTTTCCGTCCAGCTAATGTGAATAAGAAGACTGATGTTGGAGCAAGCAGAGGAAGTTCT
CTCCAAACCTCTCATGTTAAGAGGAACCACCTAGGGATGGAAAGACCACCAACCAAACTC
TTTGGTACTTCTCCACAAACTCAACAGAAATTTCCCAGTGGAGGGCAAGGTTCTGCTTCC
GTGCACATCAGACCTGGTGAAGGAGCAAAACCTGTATGGTTTCCAACTGTGCAGAACATG
CAGCCATTGAGACTTGGAATTCCACAGAAATCCATCGGTCAGCCAAATGATAAAATGATC
CATGGACAGGCACCTGCCTCACTTCAGAAGGGAAGGACCATAAGTGACATAAAGTGTAGT
GATGTGAGAATGCAGAATGAGCATCATGGTCTTTTTCACAAATCTGATTCAAACGTGAAA
GGTATGGGGTCCTTAGATACTTATTGTAATGAGACAATCCCAGCTATGCAGTTACTCAGC
CTTATGGACCGAAGGATGCCATCAACTCCTCCTTTCAATCTTGATGCAAACAAGCTCCTG
GAGAAACCTTTTTCACCCTGCAGCTATCACCCGAGGTTTCATATAGATGGAAAGCAGAGT
ATTCTCAATGGCTCATATTTATCACATCATCCCTTGAAGGAGGCCCCTGGGGTACATCCT
GGTGGTTATTATGCAGATCAAATATCTTTCAAGCCTAGGGGACAAGAGAAATCAAGAAAA
TCTTATGCTCCTTCGCAATGTGGCGGAAGCAAATTACAGAGTTTTGTGTCTTCAAGTGGC
CCGCTGACCATGACTCGAGATCCTTGTCTTGACAAGGACGGGCAAAAGAGAAACCAAGGC
ACATCAAGTTCTCAGATGCCTCCACAGCAGGATCGTAATACTTCAAAGTTCTTCAACTTG
GAGGGCCACACTGCTGCTAGAGCTGTACCTGTCAAAAGCAACTGTGAAACTTTGGTTTGC
AGCCTTAATCAAAACCCTGCTGAATTTAGTGTACCAGAAGAAGGGAACCCCTTCACTAGG
ACCATTAAGGATACAAGAATCGGCAAGAGCTCATCAAGAGAGAGATCTCGCAATGTTGAC
TTGAATAATAAGCGAAAGCAGCGGAAAGTTGTAAAGGAAAGCGCTGGGAGACTACCACCA
TCAGGCCGTGCATTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032378
PEP Infomation

pacid=37466546 transcript=PGSC0003DMT400047813 locus=PGSC0003DMG401018585 ID=PGSC0003DMT400047813.v4.03 annot-version=v4.03
Sequence

MEKSNKAVEENNHKSDTNTPVPKALGSFIQIESISIDLDIPMPKKEEGKCQHYFSIRGYV
AEKREKDRRICAPFTSSGDRSISEEQLPPPPLDVPKFRWWRCKNCMREIGTESSGEEIEI
LPPSCRSRLISPNMVSSRNATTNALLEMKHDSTSRKVDKKKAIIVDAANTSGYDFLCKPY
KGRCTMVEDKAVSAGNRTGSGNVRNEEIRYPTIEVAIAKHCSSKEIDRKSPAANLSNNVI
RVASSESTLSEGKIVPHGNLYISADDVSPDIGAETAMGSPNDDQRTVSTAFKQSDIPDTT
DNALETSKTKLSRLPSIELRDQNGISPGSDPLMAKNRQFDSHNDVPNDVPRRKTRKVRLL
TDILGGKVNLESNPAKADRNSLSTKTVVPPELEPVGMPKDKRYFQKKRKIPQEVDSNLSG
MGIQCNIGKRVRSSNGGVERSSIAVETADSRSDEKESGEEGIPNGNKNLRIKHRNGINKK
KNKQFRPVDGYSPEMRWQDITMENGGLKGYSAVNSLVHPVQHSSMGGKFEPHLSSYQSLV
GTGRGSGLCWKSSKFPEVGRVPSTLMHPNNNFPGESSTRRNHLIPVTSGIEMMTFQPARE
LSAKVGLDLSLNSFRDPDIHAGNDITQSKNMTSWPFILQKGSNGDIPRRKDNSYVRQSNV
PEAGQSSRKEVIYDLNQGVPQTASMWKDIQSSPILLQKGNLQISEIMETPRQHNKENLNE
FLEHSEAIKHRRYQHSEKTLERGLSDDIPMEIVELMAKNQYERGLTETRTKCMSERTAGF
ARPYTEIHESEAVALSHGVPSFRPANVNKKTDVGASRGSSLQTSHVKRNHLGMERPPTKL
FGTSPQTQQKFPSGGQGSASVHIRPGEGAKPVWFPTVQNMQPLRLGIPQKSIGQPNDKMI
HGQAPASLQKGRTISDIKCSDVRMQNEHHGLFHKSDSNVKGMGSLDTYCNETIPAMQLLS
LMDRRMPSTPPFNLDANKLLEKPFSPCSYHPRFHIDGKQSILNGSYLSHHPLKEAPGVHP
GGYYADQISFKPRGQEKSRKSYAPSQCGGSKLQSFVSSSGPLTMTRDPCLDKDGQKRNQG
TSSSQMPPQQDRNTSKFFNLEGHTAARAVPVKSNCETLVCSLNQNPAEFSVPEEGNPFTR
TIKDTRIGKSSSRERSRNVDLNNKRKQRKVVKESAGRLPPSGRAL*

Transcript Sequence

Transcript ID

PGSC0003DMT400047813
Transcript Infomation

pacid=37466546 locus=PGSC0003DMG401018585 ID=PGSC0003DMT400047813.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAGTAACAAAGCAGTGGAAGAAAATAATCACAAAAGTGATACTAATACTCCT
GTGCCTAAAGCCTTGGGATCGTTCATACAAATTGAATCAATATCTATAGACCTTGATATT
CCTATGCCGAAGAAAGAGGAAGGAAAATGTCAACATTATTTCTCTATACGTGGATATGTT
GCTGAGAAAAGAGAAAAAGACCGGAGAATTTGTGCACCTTTTACGTCAAGCGGTGACCGC
AGTATTTCTGAGGAGCAACTTCCTCCTCCTCCTCTGGATGTTCCCAAATTTAGGTGGTGG
CGATGCAAAAATTGCATGCGCGAGATTGGCACAGAAAGTTCAGGAGAAGAGATTGAGATT
CTTCCTCCAAGCTGCAGAAGTAGATTGATCTCTCCAAATATGGTTTCTTCTAGAAATGCT
ACAACAAATGCATTGTTAGAGATGAAGCATGATTCAACTTCACGAAAGGTTGACAAAAAG
AAAGCTATTATCGTTGATGCTGCCAATACCAGTGGCTATGACTTCTTATGTAAACCTTAC
AAAGGAAGGTGCACTATGGTTGAAGACAAAGCTGTCTCAGCTGGTAACAGAACTGGTTCA
GGAAATGTTAGAAATGAGGAGATCAGATATCCAACTATTGAGGTAGCAATAGCTAAACAT
TGCTCAAGCAAAGAAATAGATAGAAAGAGCCCTGCTGCTAATCTGTCAAACAACGTCATA
CGAGTTGCAAGCTCTGAATCAACTCTGTCAGAGGGTAAAATTGTTCCCCATGGAAATCTC
TACATAAGTGCTGATGATGTAAGTCCTGATATTGGTGCAGAGACAGCAATGGGTTCTCCA
AATGACGATCAGAGGACAGTCTCAACAGCTTTTAAGCAATCTGATATACCAGATACTACT
GATAATGCTCTTGAAACCAGTAAAACAAAACTGAGTAGGTTACCTTCCATTGAATTGAGA
GACCAGAATGGAATATCTCCAGGAAGCGACCCACTCATGGCTAAAAATAGACAGTTTGAT
TCACACAATGATGTTCCAAATGATGTACCACGCCGGAAAACTCGAAAGGTGCGTCTGTTG
ACTGATATATTGGGTGGAAAAGTCAATTTGGAGAGTAATCCTGCCAAAGCAGATCGTAAT
TCATTGAGTACCAAGACTGTGGTGCCTCCTGAACTAGAACCAGTTGGTATGCCAAAGGAT
AAGAGATACTTTCAGAAGAAGAGGAAGATTCCTCAAGAAGTTGACAGCAATCTGTCGGGT
ATGGGAATACAATGCAACATTGGTAAAAGGGTCAGGTCATCTAATGGAGGAGTTGAGAGG
AGTTCCATAGCAGTTGAAACTGCTGATTCACGTTCAGATGAGAAGGAATCTGGTGAAGAA
GGTATACCGAATGGTAACAAAAATCTGCGAATCAAGCATAGAAATGGAATAAATAAAAAG
AAAAATAAGCAGTTTCGACCTGTCGATGGATATTCCCCTGAAATGCGCTGGCAGGATATA
ACCATGGAAAATGGAGGTTTAAAGGGATATAGTGCTGTTAATAGCCTCGTTCATCCAGTG
CAACATTCTTCCATGGGTGGGAAATTTGAACCTCATTTAAGTAGTTATCAGTCATTGGTA
GGAACAGGTAGAGGTTCTGGCTTGTGTTGGAAAAGTAGTAAGTTTCCTGAAGTTGGACGT
GTTCCCTCAACTCTTATGCATCCTAACAATAATTTCCCGGGGGAAAGTTCAACCAGGAGG
AATCATCTCATACCAGTGACCAGTGGTATCGAAATGATGACCTTTCAGCCAGCACGTGAA
TTATCTGCTAAAGTAGGGCTAGACCTGTCTTTGAACAGCTTCAGAGATCCCGACATACAT
GCGGGGAATGATATTACCCAAAGCAAAAATATGACAAGCTGGCCATTCATTCTCCAGAAG
GGATCGAATGGTGATATTCCTCGAAGGAAAGATAATTCTTATGTCAGACAGTCGAACGTT
CCTGAAGCAGGTCAATCTTCAAGGAAAGAAGTGATATATGACCTCAACCAGGGAGTTCCG
CAGACAGCATCTATGTGGAAAGATATCCAAAGCTCTCCAATTCTACTTCAGAAGGGGAAT
CTTCAAATTTCTGAGATAATGGAAACGCCTCGCCAGCATAACAAAGAAAATCTTAATGAA
TTTCTAGAGCATTCAGAGGCAATTAAGCATCGCAGATATCAACATTCTGAGAAGACTTTA
GAACGAGGGTTGTCAGATGATATACCAATGGAAATTGTGGAGTTAATGGCGAAGAACCAG
TACGAGAGAGGTCTTACTGAGACCAGAACCAAATGCATGAGTGAAAGGACTGCTGGTTTT
GCAAGGCCATATACTGAAATACATGAGAGTGAAGCAGTGGCGTTGTCACATGGTGTACCT
AGTTTCCGTCCAGCTAATGTGAATAAGAAGACTGATGTTGGAGCAAGCAGAGGAAGTTCT
CTCCAAACCTCTCATGTTAAGAGGAACCACCTAGGGATGGAAAGACCACCAACCAAACTC
TTTGGTACTTCTCCACAAACTCAACAGAAATTTCCCAGTGGAGGGCAAGGTTCTGCTTCC
GTGCACATCAGACCTGGTGAAGGAGCAAAACCTGTATGGTTTCCAACTGTGCAGAACATG
CAGCCATTGAGACTTGGAATTCCACAGAAATCCATCGGTCAGCCAAATGATAAAATGATC
CATGGACAGGCACCTGCCTCACTTCAGAAGGGAAGGACCATAAGTGACATAAAGTGTAGT
GATGTGAGAATGCAGAATGAGCATCATGGTCTTTTTCACAAATCTGATTCAAACGTGAAA
GGTATGGGGTCCTTAGATACTTATTGTAATGAGACAATCCCAGCTATGCAGTTACTCAGC
CTTATGGACCGAAGGATGCCATCAACTCCTCCTTTCAATCTTGATGCAAACAAGCTCCTG
GAGAAACCTTTTTCACCCTGCAGCTATCACCCGAGGTTTCATATAGATGGAAAGCAGAGT
ATTCTCAATGGCTCATATTTATCACATCATCCCTTGAAGGAGGCCCCTGGGGTACATCCT
GGTGGTTATTATGCAGATCAAATATCTTTCAAGCCTAGGGGACAAGAGAAATCAAGAAAA
TCTTATGCTCCTTCGCAATGTGGCGGAAGCAAATTACAGAGTTTTGTGTCTTCAAGTGGC
CCGCTGACCATGACTCGAGATCCTTGTCTTGACAAGGACGGGCAAAAGAGAAACCAAGGC
ACATCAAGTTCTCAGATGCCTCCACAGCAGGATCGTAATACTTCAAAGTTCTTCAACTTG
GAGGGCCACACTGCTGCTAGAGCTGTACCTGTCAAAAGCAACTGTGAAACTTTGGTTTGC
AGCCTTAATCAAAACCCTGCTGAATTTAGTGTACCAGAAGAAGGGAACCCCTTCACTAGG
ACCATTAAGGATACAAGAATCGGCAAGAGCTCATCAAGAGAGAGATCTCGCAATGTTGAC
TTGAATAATAAGCGAAAGCAGCGGAAAGTTGTAAAGGAAAGCGCTGGGAGACTACCACCA
TCAGGCCGTGCATTGTGA