Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047797
CDS Infomation

pacid=37466742 polypeptide=PGSC0003DMP400032367 locus=PGSC0003DMG400018578 ID=PGSC0003DMT400047797.v4.03 annot-version=v4.03
Sequence

ATGGATTTCATGAAGGTATTCGATCAAACGGTTCGCGAAATAAAGAGGGAGGTTAATTTG
AAAGTGTTGAAGGTTCCAGAGATCGAGCAGAAGGTATTGGATGCTACGGATGACGAACCT
TGGGGCCCCCATGGTACTGCATTGGCCGATATAGCTCAGGCCACAAAAAAATTCTCTGAG
TGTCAGATGGTTATGAATGTCTTGTGGTCAAGATTGCCTGAAACAGGGAAGAACTGGCGT
TATGTCTATAAGTCGTTGTCTGTTCTAGAGTATTTGGTGGCACATGGATCTGAGCGCGCA
GTTGATGAGATTGTAGAACATACCTATCAGATCTCATCTCTCGCAAGTTTCGAGTATGTT
GAACCCAATGGGAAAGATATGGGAATCAATGTGAGGAAAAAAGCAGAAAACATTGTGGCA
CTATTGAATAACAAGGAAAAGATACAAGAGGTTAGAGAAAAAGCTTCTGCAAATCGCGAC
AAGTACTTTGGACTGTCATCTTCCGGAGTAACAGTTAAGTCAAGCTCTTCCTCTTTTAGT
AGCAGCGGCAACTTTCAGAGTAGTGATCGCTATGGAGGTTTTGGAAATAAAAATGATGGA
AATTCATTCAAGGATAGTTACAAGGACAAGGATCGGTATGGTGAAGATAAGGTTGACCGA
AGTACTTTTAAATCAAAAAAGGGATCATCTCCTTATGGAAGCAATGTGCAAGCCACTGCT
TCAGCTAGTGGATCAAAGACCGCAAAGAGAGTAGGTAAACCTGATAAAGCTAGTTCTAGT
CCTAAACAGAGCGCAGCTGCATCTTCAAGTAAATATGAGGAAGATTTTGATGATTTTGAT
CCTCGAGGGACTTCAAGTACTAAGCCTTCTACAGGAAACTCTGGCCAAGTAGATCTATTT
GGGCAAAATTTGATGGGTGACCTCTTGGATGCACCAACACCTGTTCCAGCTGATAATTCT
TCTGTCACCAGTCATCCATCGGAGGTTGATTTATTTGCTGACGCCAATTTTGTATCTGTG
AAACCAGAGTCTAAGATAAGTGTAGATCTGTTTGCTTCCCATCCTTCCTCTTCACCTGTA
GCTTCTTCAACAATGGATTTTTTTGCTGCACCAGATCCTGTTGTTCAACCCAACGTCAAA
TCTTCAAAACCAGTCCAGATAAATACTACTATGGTCGATCCATTTGCTACAGTTCCACTA
AATAACTTTGATAGTTCTGATCCTTTTGGTGCATTTGTTTCCCCTGCTGATCCTATATCA
GTACCCAATGTAAGTGCCACCAGTGGTGGGAATCAGCAGACTCCTACCAAATTAGACAAA
TCTCCTCTCCAAACAAAGCCCTCACCAAAGAAGGATAATTTTCAAGTCAGCTCCGGAATA
TGGGCTGATTCATTGAGCCGTGGACTCATTGATCTGAATATTGCTGCACCTACAAAGGTC
AATCTTGCAGATGTAGGCATCATGGGTGGATTGACCGATGGGTCGGATGGGAAGGAAAAA
GGGCCAACCACTTTTTACATGGGTAGAGCTATGGGTCAAGGAACCAAACTTGGCCAATCC
GGGTTCGCGTCCACAGCAACTGGTGCAGATGACTTTTTTTCAAGTCATCAAAACTATCAA
TTTGGCAACTTCCAGAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032367
PEP Infomation

pacid=37466742 transcript=PGSC0003DMT400047797 locus=PGSC0003DMG400018578 ID=PGSC0003DMT400047797.v4.03 annot-version=v4.03
Sequence

MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDDEPWGPHGTALADIAQATKKFSE
CQMVMNVLWSRLPETGKNWRYVYKSLSVLEYLVAHGSERAVDEIVEHTYQISSLASFEYV
EPNGKDMGINVRKKAENIVALLNNKEKIQEVREKASANRDKYFGLSSSGVTVKSSSSSFS
SSGNFQSSDRYGGFGNKNDGNSFKDSYKDKDRYGEDKVDRSTFKSKKGSSPYGSNVQATA
SASGSKTAKRVGKPDKASSSPKQSAAASSSKYEEDFDDFDPRGTSSTKPSTGNSGQVDLF
GQNLMGDLLDAPTPVPADNSSVTSHPSEVDLFADANFVSVKPESKISVDLFASHPSSSPV
ASSTMDFFAAPDPVVQPNVKSSKPVQINTTMVDPFATVPLNNFDSSDPFGAFVSPADPIS
VPNVSATSGGNQQTPTKLDKSPLQTKPSPKKDNFQVSSGIWADSLSRGLIDLNIAAPTKV
NLADVGIMGGLTDGSDGKEKGPTTFYMGRAMGQGTKLGQSGFASTATGADDFFSSHQNYQ
FGNFQK*

Transcript Sequence

Transcript ID

PGSC0003DMT400047797
Transcript Infomation

pacid=37466742 locus=PGSC0003DMG400018578 ID=PGSC0003DMT400047797.v4.03 annot-version=v4.03
Sequence

ATGGATTTCATGAAGGTATTCGATCAAACGGTTCGCGAAATAAAGAGGGAGGTTAATTTG
AAAGTGTTGAAGGTTCCAGAGATCGAGCAGAAGGTATTGGATGCTACGGATGACGAACCT
TGGGGCCCCCATGGTACTGCATTGGCCGATATAGCTCAGGCCACAAAAAAATTCTCTGAG
TGTCAGATGGTTATGAATGTCTTGTGGTCAAGATTGCCTGAAACAGGGAAGAACTGGCGT
TATGTCTATAAGTCGTTGTCTGTTCTAGAGTATTTGGTGGCACATGGATCTGAGCGCGCA
GTTGATGAGATTGTAGAACATACCTATCAGATCTCATCTCTCGCAAGTTTCGAGTATGTT
GAACCCAATGGGAAAGATATGGGAATCAATGTGAGGAAAAAAGCAGAAAACATTGTGGCA
CTATTGAATAACAAGGAAAAGATACAAGAGGTTAGAGAAAAAGCTTCTGCAAATCGCGAC
AAGTACTTTGGACTGTCATCTTCCGGAGTAACAGTTAAGTCAAGCTCTTCCTCTTTTAGT
AGCAGCGGCAACTTTCAGAGTAGTGATCGCTATGGAGGTTTTGGAAATAAAAATGATGGA
AATTCATTCAAGGATAGTTACAAGGACAAGGATCGGTATGGTGAAGATAAGGTTGACCGA
AGTACTTTTAAATCAAAAAAGGGATCATCTCCTTATGGAAGCAATGTGCAAGCCACTGCT
TCAGCTAGTGGATCAAAGACCGCAAAGAGAGTAGGTAAACCTGATAAAGCTAGTTCTAGT
CCTAAACAGAGCGCAGCTGCATCTTCAAGTAAATATGAGGAAGATTTTGATGATTTTGAT
CCTCGAGGGACTTCAAGTACTAAGCCTTCTACAGGAAACTCTGGCCAAGTAGATCTATTT
GGGCAAAATTTGATGGGTGACCTCTTGGATGCACCAACACCTGTTCCAGCTGATAATTCT
TCTGTCACCAGTCATCCATCGGAGGTTGATTTATTTGCTGACGCCAATTTTGTATCTGTG
AAACCAGAGTCTAAGATAAGTGTAGATCTGTTTGCTTCCCATCCTTCCTCTTCACCTGTA
GCTTCTTCAACAATGGATTTTTTTGCTGCACCAGATCCTGTTGTTCAACCCAACGTCAAA
TCTTCAAAACCAGTCCAGATAAATACTACTATGGTCGATCCATTTGCTACAGTTCCACTA
AATAACTTTGATAGTTCTGATCCTTTTGGTGCATTTGTTTCCCCTGCTGATCCTATATCA
GTACCCAATGTAAGTGCCACCAGTGGTGGGAATCAGCAGACTCCTACCAAATTAGACAAA
TCTCCTCTCCAAACAAAGCCCTCACCAAAGAAGGATAATTTTCAAGTCAGCTCCGGAATA
TGGGCTGATTCATTGAGCCGTGGACTCATTGATCTGAATATTGCTGCACCTACAAAGGTC
AATCTTGCAGATGTAGGCATCATGGGTGGATTGACCGATGGGTCGGATGGGAAGGAAAAA
GGGCCAACCACTTTTTACATGGGTAGAGCTATGGGTCAAGGAACCAAACTTGGCCAATCC
GGGTTCGCGTCCACAGCAACTGGTGCAGATGACTTTTTTTCAAGTCATCAAAACTATCAA
TTTGGCAACTTCCAGAAGTGA