Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047781
CDS Infomation

pacid=37464329 polypeptide=PGSC0003DMP400032359 locus=PGSC0003DMG400018574 ID=PGSC0003DMT400047781.v4.03 annot-version=v4.03
Sequence

ATGCCGCTACATCTAAGCAAGTTGAAAAGCCTCCAAGTGCTAGTGGGAGCCAAGTTTCTT
TTAGGTGGTCACGGTGGTTCGAGAATGGATGATTTGGGCGAAGCACAGAACTTGTATGGA
TCTCTATCGATTCTAGAGTTGCAAAATGTGGTTGATAGAAGGGAAGCTGCGAAAGCAAAG
ATGAGGGAGAAGAATCATGTTGAGAAGTTATCTCTGGAGTGGAGTGAAAGTAGTGCCGAC
AATTCACAAACTGAAAGAGACATACTTGACGATCTACACCCACATACAAACATAAAGGAA
CTCCGAATCACCGGATATAGAGGGAAGAAATTTCCAAATTGGCTAGCTGATCCTTTGTTT
CTTAAGCTAGTTAAATTGTCTCTTAGAAACTGCAAGGACTGTGATACCTTGCCAGCACTA
GGACAGCTTCCTTCTTTGAAAATCCTTTCCATTAGAGGGATGCACCGAATAACAAAGGTG
ACAGAAGAATTCTATGGTAGTTCGTCATCCAAAAAGTCTTTTAACTCTCTTGAGGAGCTT
GAATTTGCATATATGTCGAAGTGGAAGCAATGGCACGTACTAGGTAATGGAGAGTTCCCT
ACACTTAAGAACCTTTCAATTAAAAATTGCCCTGAACTCAGTGTGGAGATACCCATCCAA
CTTGAGGGAATGAAGCAGATTGAGCGATTATCTATTGTTGATTGTAACTCTCTTACCTCT
TTTCCTTTTAGCATTCTGCTGAGTACCTTGAATACAATATACATATCTGGTTGCCAGAAA
TTGAAATTGAAGGCGCCAGTTGGTTATTGTAACATGCTTCTAGAGGATTTGAGAGTGGAA
GAATGTGAATGTATAGATGATGTATCACCTGAGTTGCTCCCAAGAGCACGCAAATTGAGT
GTAGAGAGTTGCCACAACCTTACTAGGTTTTTGATTCCTACTGCCACCGAAAGTCTCTTT
ATTTGGAATTGTATGAATGTTGAAAAACTTTCGGTGGCATGTGGGGGGACCCAAATGACG
TCACTGAGTATTGCCCAGTGTAGGAAGCTGAAGTGTCTGCCAGAACGTATGCAGGAACTC
CTTCCATCTCTTAAGGAAATGTATCTGTTTAATTGTCCAGAAGTAGAGTTTTTTCCTGAA
GGAGGATTACCCTCCAATTTGCAAGTCCTTCAGATTGTCAATTGCAAGAAACTAGTGATC
GGAAGAAAGGAGTGGCATTTACAGAGACTTCCCTGTCTCATAGAGTTAGTGATCGAAGAG
ATTCTTGCTTGTGAGAATTGGGAGTTGCCTTCCTCTATTCAAAGACTAACCATAGACAGT
CTGAAAACATTAAGCAGCCAACATCTCAAAAGCCTCACCTCTCTTCAATATCTACGTATT
GCTAATTTACCTCAAATTCAGTCACTGCTGGAACCAGGGCGGCTTCCGTCATCTCTTTCT
GAGCTACATTTATATAGACATCATGAGCTCCATTCACTTGGTCTTTGCCACCTCACTTCG
CTTCAAAGCTTACACATCGGGAATTGCCATAATCTCCAATCACTTTCTGAATCAGCACTG
CCCTCCTCTCTCTCTAAGCTAACCATCTATGATTGCCCTAATCTCCAATCACTTTCCAAA
TCAGTACTTCCCTCCTCCCTCTCTGAGCTGGACATCTCCCATTGCCCTAATCTCCAATCT
CTTCTAGTAAAAGGGATGCCCTCTTCCCTCTCTAAACTATCTATTTCTAACTGTCCATTG
CTCACACCACTACTAGAATTTGACAAGGGGGAATACTGGCCAAATATTGCTCAAATTCCC
ATCATTGATATCGATTTGAAATTCCTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032359
PEP Infomation

pacid=37464329 transcript=PGSC0003DMT400047781 locus=PGSC0003DMG400018574 ID=PGSC0003DMT400047781.v4.03 annot-version=v4.03
Sequence

MPLHLSKLKSLQVLVGAKFLLGGHGGSRMDDLGEAQNLYGSLSILELQNVVDRREAAKAK
MREKNHVEKLSLEWSESSADNSQTERDILDDLHPHTNIKELRITGYRGKKFPNWLADPLF
LKLVKLSLRNCKDCDTLPALGQLPSLKILSIRGMHRITKVTEEFYGSSSSKKSFNSLEEL
EFAYMSKWKQWHVLGNGEFPTLKNLSIKNCPELSVEIPIQLEGMKQIERLSIVDCNSLTS
FPFSILLSTLNTIYISGCQKLKLKAPVGYCNMLLEDLRVEECECIDDVSPELLPRARKLS
VESCHNLTRFLIPTATESLFIWNCMNVEKLSVACGGTQMTSLSIAQCRKLKCLPERMQEL
LPSLKEMYLFNCPEVEFFPEGGLPSNLQVLQIVNCKKLVIGRKEWHLQRLPCLIELVIEE
ILACENWELPSSIQRLTIDSLKTLSSQHLKSLTSLQYLRIANLPQIQSLLEPGRLPSSLS
ELHLYRHHELHSLGLCHLTSLQSLHIGNCHNLQSLSESALPSSLSKLTIYDCPNLQSLSK
SVLPSSLSELDISHCPNLQSLLVKGMPSSLSKLSISNCPLLTPLLEFDKGEYWPNIAQIP
IIDIDLKFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400047781
Transcript Infomation

pacid=37464329 locus=PGSC0003DMG400018574 ID=PGSC0003DMT400047781.v4.03 annot-version=v4.03
Sequence

ATGCCGCTACATCTAAGCAAGTTGAAAAGCCTCCAAGTGCTAGTGGGAGCCAAGTTTCTT
TTAGGTGGTCACGGTGGTTCGAGAATGGATGATTTGGGCGAAGCACAGAACTTGTATGGA
TCTCTATCGATTCTAGAGTTGCAAAATGTGGTTGATAGAAGGGAAGCTGCGAAAGCAAAG
ATGAGGGAGAAGAATCATGTTGAGAAGTTATCTCTGGAGTGGAGTGAAAGTAGTGCCGAC
AATTCACAAACTGAAAGAGACATACTTGACGATCTACACCCACATACAAACATAAAGGAA
CTCCGAATCACCGGATATAGAGGGAAGAAATTTCCAAATTGGCTAGCTGATCCTTTGTTT
CTTAAGCTAGTTAAATTGTCTCTTAGAAACTGCAAGGACTGTGATACCTTGCCAGCACTA
GGACAGCTTCCTTCTTTGAAAATCCTTTCCATTAGAGGGATGCACCGAATAACAAAGGTG
ACAGAAGAATTCTATGGTAGTTCGTCATCCAAAAAGTCTTTTAACTCTCTTGAGGAGCTT
GAATTTGCATATATGTCGAAGTGGAAGCAATGGCACGTACTAGGTAATGGAGAGTTCCCT
ACACTTAAGAACCTTTCAATTAAAAATTGCCCTGAACTCAGTGTGGAGATACCCATCCAA
CTTGAGGGAATGAAGCAGATTGAGCGATTATCTATTGTTGATTGTAACTCTCTTACCTCT
TTTCCTTTTAGCATTCTGCTGAGTACCTTGAATACAATATACATATCTGGTTGCCAGAAA
TTGAAATTGAAGGCGCCAGTTGGTTATTGTAACATGCTTCTAGAGGATTTGAGAGTGGAA
GAATGTGAATGTATAGATGATGTATCACCTGAGTTGCTCCCAAGAGCACGCAAATTGAGT
GTAGAGAGTTGCCACAACCTTACTAGGTTTTTGATTCCTACTGCCACCGAAAGTCTCTTT
ATTTGGAATTGTATGAATGTTGAAAAACTTTCGGTGGCATGTGGGGGGACCCAAATGACG
TCACTGAGTATTGCCCAGTGTAGGAAGCTGAAGTGTCTGCCAGAACGTATGCAGGAACTC
CTTCCATCTCTTAAGGAAATGTATCTGTTTAATTGTCCAGAAGTAGAGTTTTTTCCTGAA
GGAGGATTACCCTCCAATTTGCAAGTCCTTCAGATTGTCAATTGCAAGAAACTAGTGATC
GGAAGAAAGGAGTGGCATTTACAGAGACTTCCCTGTCTCATAGAGTTAGTGATCGAAGAG
ATTCTTGCTTGTGAGAATTGGGAGTTGCCTTCCTCTATTCAAAGACTAACCATAGACAGT
CTGAAAACATTAAGCAGCCAACATCTCAAAAGCCTCACCTCTCTTCAATATCTACGTATT
GCTAATTTACCTCAAATTCAGTCACTGCTGGAACCAGGGCGGCTTCCGTCATCTCTTTCT
GAGCTACATTTATATAGACATCATGAGCTCCATTCACTTGGTCTTTGCCACCTCACTTCG
CTTCAAAGCTTACACATCGGGAATTGCCATAATCTCCAATCACTTTCTGAATCAGCACTG
CCCTCCTCTCTCTCTAAGCTAACCATCTATGATTGCCCTAATCTCCAATCACTTTCCAAA
TCAGTACTTCCCTCCTCCCTCTCTGAGCTGGACATCTCCCATTGCCCTAATCTCCAATCT
CTTCTAGTAAAAGGGATGCCCTCTTCCCTCTCTAAACTATCTATTTCTAACTGTCCATTG
CTCACACCACTACTAGAATTTGACAAGGGGGAATACTGGCCAAATATTGCTCAAATTCCC
ATCATTGATATCGATTTGAAATTCCTGTGA