Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047760
CDS Infomation

pacid=37466116 polypeptide=PGSC0003DMP400032347 locus=PGSC0003DMG400018565 ID=PGSC0003DMT400047760.v4.03 annot-version=v4.03
Sequence

ATGAATTCAAGCAATCACAGAGTCATTACATGCAAAGGTGCAGTAGTATGGAAGTCTGGA
GATGAATTGAAAATAGAAGAAATAGAAGTCGATCCACCAAAATCAACAGAAGTTAGAATT
AAAATGATTTATGCTAGTTTATGTGGTACTGATGTTCTTTGTTGCAATGGCTTTCCAAAG
CCTTTGTTCCCTCGCATTCCTGGACATGAAGGAGTTGGCGCGATAGAAAGTGTGGGAGAA
AGTGTAAAAGATTTGAAAGAAGGAGACATAGTGATGCCACATTTCTTAGGAGAATGTGGA
GATTGTCCCAATTGCAAGTCCAAAAGATCCAATTTATGCCATAAATACCCTTTAAATTTT
AGTGGATTATTGTTGGATGGAACATCAAGAATGTCCATTAATGGTCAAAAAATTTATCAC
CATGTTAGTTGTTCAACATTATCAGAGTACATAGTTCTTGATGAAAACTATGTTATTAAG
GTTGATCCTAGGTTACCAATTGAACATGTTCCTTTTTTATGTTGTGCATTTACAACTGGT
TTTGGAGCAACATGGAAAGATGTTAACATTGAAAAAGGTTCAACTGTTGCTGTCCTTGGT
CTTGGAGGTGTTGGACTTGGTGTGGTAGAAGGAGCTAGACAAAAAGAAGCAGCCAAAATA
ATTGGGATGGATATACATGAAATGAAAATTGAAAAAGCAAAGATTTATGGAATTACTGAT
TTTATAAATATTTCTGAAAAATCAATTTCAGAATTAATTAAAGATGCTACTGGTGGACTT
GGTGTTGACTACTTTTTTGAGTGTACAGATGTGCCTCAACTCACTATCAATGAAGCCATT
CAATCAACTAGAATGGGTTATGGAACAGTGATAGTGCTTGGAGCTGGACTTGTGTTAGAT
TGGCAAATGAGTTATGTCCCACTCATGTTTGGTAGAACACTCAAAGGATCAATCTATGGT
GGCATTAGAACTCACACAGATCTTCCATCTATAATTGATAAATGCATTAGCAAGGAGATC
AAACTAGATGAATTATTGACTCATGAAGTTTCATTCAATGATGTAAACAAGGCATTTGAG
TACTTGAAAGAACCAAATTGTGTGAAGGTTCTTATCAAGTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032347
PEP Infomation

pacid=37466116 transcript=PGSC0003DMT400047760 locus=PGSC0003DMG400018565 ID=PGSC0003DMT400047760.v4.03 annot-version=v4.03
Sequence

MNSSNHRVITCKGAVVWKSGDELKIEEIEVDPPKSTEVRIKMIYASLCGTDVLCCNGFPK
PLFPRIPGHEGVGAIESVGESVKDLKEGDIVMPHFLGECGDCPNCKSKRSNLCHKYPLNF
SGLLLDGTSRMSINGQKIYHHVSCSTLSEYIVLDENYVIKVDPRLPIEHVPFLCCAFTTG
FGATWKDVNIEKGSTVAVLGLGGVGLGVVEGARQKEAAKIIGMDIHEMKIEKAKIYGITD
FINISEKSISELIKDATGGLGVDYFFECTDVPQLTINEAIQSTRMGYGTVIVLGAGLVLD
WQMSYVPLMFGRTLKGSIYGGIRTHTDLPSIIDKCISKEIKLDELLTHEVSFNDVNKAFE
YLKEPNCVKVLIKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400047760
Transcript Infomation

pacid=37466116 locus=PGSC0003DMG400018565 ID=PGSC0003DMT400047760.v4.03 annot-version=v4.03
Sequence

ATGAATTCAAGCAATCACAGAGTCATTACATGCAAAGGTGCAGTAGTATGGAAGTCTGGA
GATGAATTGAAAATAGAAGAAATAGAAGTCGATCCACCAAAATCAACAGAAGTTAGAATT
AAAATGATTTATGCTAGTTTATGTGGTACTGATGTTCTTTGTTGCAATGGCTTTCCAAAG
CCTTTGTTCCCTCGCATTCCTGGACATGAAGGAGTTGGCGCGATAGAAAGTGTGGGAGAA
AGTGTAAAAGATTTGAAAGAAGGAGACATAGTGATGCCACATTTCTTAGGAGAATGTGGA
GATTGTCCCAATTGCAAGTCCAAAAGATCCAATTTATGCCATAAATACCCTTTAAATTTT
AGTGGATTATTGTTGGATGGAACATCAAGAATGTCCATTAATGGTCAAAAAATTTATCAC
CATGTTAGTTGTTCAACATTATCAGAGTACATAGTTCTTGATGAAAACTATGTTATTAAG
GTTGATCCTAGGTTACCAATTGAACATGTTCCTTTTTTATGTTGTGCATTTACAACTGGT
TTTGGAGCAACATGGAAAGATGTTAACATTGAAAAAGGTTCAACTGTTGCTGTCCTTGGT
CTTGGAGGTGTTGGACTTGGTGTGGTAGAAGGAGCTAGACAAAAAGAAGCAGCCAAAATA
ATTGGGATGGATATACATGAAATGAAAATTGAAAAAGCAAAGATTTATGGAATTACTGAT
TTTATAAATATTTCTGAAAAATCAATTTCAGAATTAATTAAAGATGCTACTGGTGGACTT
GGTGTTGACTACTTTTTTGAGTGTACAGATGTGCCTCAACTCACTATCAATGAAGCCATT
CAATCAACTAGAATGGGTTATGGAACAGTGATAGTGCTTGGAGCTGGACTTGTGTTAGAT
TGGCAAATGAGTTATGTCCCACTCATGTTTGGTAGAACACTCAAAGGATCAATCTATGGT
GGCATTAGAACTCACACAGATCTTCCATCTATAATTGATAAATGCATTAGCAAGGAGATC
AAACTAGATGAATTATTGACTCATGAAGTTTCATTCAATGATGTAAACAAGGCATTTGAG
TACTTGAAAGAACCAAATTGTGTGAAGGTTCTTATCAAGTTTTGA