Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047743
CDS Infomation

pacid=37465620 polypeptide=PGSC0003DMP400032340 locus=PGSC0003DMG400018560 ID=PGSC0003DMT400047743.v4.03 annot-version=v4.03
Sequence

ATGTCATCGAGGGTGTCGGTAACAGTGTCACAGGACGGAACTGGTGATTACCGGACAGTG
CAAGAAGCCATAGACGCTGTTCCACTATCAAATAAGTGTCGCACTGTGATTCGTGTAGCG
GCTGGTGTTTATAAGCAGCCAATTTATGTTCCGAAAACGAAAAATTACATTACACTTGCT
GGGGTTAGTCCTGAAGCTACTGTTCTCACCTGGAATAATACTGCCACTAAAATTGATCAC
CATCAGGCTGCAAGGTTAATTGGTACTGGTACATTTGGGTGTGGGAGTACAATAGTGGAA
GGAGAGGATTTTATTGCTGAGAACATCACCTTTGAAAACTCTGCTCCTGAGGGATCAGGA
CAGGCAGTGGCAATCAGAGTTACAGCTGATCGTTGTGCATTTTATAATTGCAGATTTCTT
GGTTGGCAGGATACGCTGTATTTGCACTACGGGAAGCAATATTTGAAAGATTGCTATATC
GAAGGAAGTGTAGATTTTATTTTTGGTAATAGCACTGCTCTCTTAGAGCATTGTCACATA
CACTGCAAATCGGCAGGATTCATTACTGCACAAAGCAGGAAATCTTCTCAAGAGACAACC
GGCTATGTGTTTCTGAGATGTGTGATCACTGGCAGCGGAGCAACCTCATATACACATCTT
GGACGCCCATGGGGGCCTTTTGGGAGGGTGGTTTTTGCCTATTGTTATATGGATCACTGT
ATTAAGCATGTCGGTTGGAACAACTGGGGTAAAGCAGAAAATGAGAGAACTGCTTGCTTC
TATGAGTACCGGTGTCATGGACCGGGTAGCTGCCCGTCAAAACGTGTCACCTGGGCCAGA
GAATTGATGGATGAAGAAGCAGAACAATTTATCATGCATGGGTTCATTGATTCTGATCAA
CAAAGCCCTTGGCTGTGTCAGAGGATGGCGTTGCGCATACCATATTCAGCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400032340
PEP Infomation

pacid=37465620 transcript=PGSC0003DMT400047743 locus=PGSC0003DMG400018560 ID=PGSC0003DMT400047743.v4.03 annot-version=v4.03
Sequence

MSSRVSVTVSQDGTGDYRTVQEAIDAVPLSNKCRTVIRVAAGVYKQPIYVPKTKNYITLA
GVSPEATVLTWNNTATKIDHHQAARLIGTGTFGCGSTIVEGEDFIAENITFENSAPEGSG
QAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHI
HCKSAGFITAQSRKSSQETTGYVFLRCVITGSGATSYTHLGRPWGPFGRVVFAYCYMDHC
IKHVGWNNWGKAENERTACFYEYRCHGPGSCPSKRVTWARELMDEEAEQFIMHGFIDSDQ
QSPWLCQRMALRIPYSA*

Transcript Sequence

Transcript ID

PGSC0003DMT400047743
Transcript Infomation

pacid=37465620 locus=PGSC0003DMG400018560 ID=PGSC0003DMT400047743.v4.03 annot-version=v4.03
Sequence

ATGTCATCGAGGGTGTCGGTAACAGTGTCACAGGACGGAACTGGTGATTACCGGACAGTG
CAAGAAGCCATAGACGCTGTTCCACTATCAAATAAGTGTCGCACTGTGATTCGTGTAGCG
GCTGGTGTTTATAAGCAGCCAATTTATGTTCCGAAAACGAAAAATTACATTACACTTGCT
GGGGTTAGTCCTGAAGCTACTGTTCTCACCTGGAATAATACTGCCACTAAAATTGATCAC
CATCAGGCTGCAAGGTTAATTGGTACTGGTACATTTGGGTGTGGGAGTACAATAGTGGAA
GGAGAGGATTTTATTGCTGAGAACATCACCTTTGAAAACTCTGCTCCTGAGGGATCAGGA
CAGGCAGTGGCAATCAGAGTTACAGCTGATCGTTGTGCATTTTATAATTGCAGATTTCTT
GGTTGGCAGGATACGCTGTATTTGCACTACGGGAAGCAATATTTGAAAGATTGCTATATC
GAAGGAAGTGTAGATTTTATTTTTGGTAATAGCACTGCTCTCTTAGAGCATTGTCACATA
CACTGCAAATCGGCAGGATTCATTACTGCACAAAGCAGGAAATCTTCTCAAGAGACAACC
GGCTATGTGTTTCTGAGATGTGTGATCACTGGCAGCGGAGCAACCTCATATACACATCTT
GGACGCCCATGGGGGCCTTTTGGGAGGGTGGTTTTTGCCTATTGTTATATGGATCACTGT
ATTAAGCATGTCGGTTGGAACAACTGGGGTAAAGCAGAAAATGAGAGAACTGCTTGCTTC
TATGAGTACCGGTGTCATGGACCGGGTAGCTGCCCGTCAAAACGTGTCACCTGGGCCAGA
GAATTGATGGATGAAGAAGCAGAACAATTTATCATGCATGGGTTCATTGATTCTGATCAA
CAAAGCCCTTGGCTGTGTCAGAGGATGGCGTTGCGCATACCATATTCAGCATAA