Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047727
CDS Infomation

pacid=37461545 polypeptide=PGSC0003DMP400032325 locus=PGSC0003DMG400018550 ID=PGSC0003DMT400047727.v4.03 annot-version=v4.03
Sequence

ATGGATGAAAAGGGTGTCTTAAGTTCCTGTTTGATTACATCAGAAGGGAGAAGGGAGAGC
TTATGTCCAATTTACTTTGGTGTTTCTTGTGCATTTGTTGCTCTTGGGCTCTTACCGGAG
CCCGAAAAATGTGATGAGAATTTGTTAGAAGTGAGAAATAAGATGCTTCAAGGAAGTGCT
CATCTTTTGGGGTTGCTTGTGTGGAGAGTTCAGAGGGATGAAGCAAGAAATGAAAAGTCT
GGATTGTTACTTAAGTTAGCGAATGCAGAGAAAAAAATCGACGAACTGAAGGGGTTAAGA
AGGGAGGATGCTAAAGCAAATGAGAAAGTTGTGTGCATATATGCAGCACAAGAGCAGTGT
TGGTTTAATGAGAGGAAGAAACTTAGGCAGCAAATTGGTGCTTTTATGAATGAGTTGAGA
GTTGTTGAGAAGCACAAGGACACCCTTATTGCTGAATTGGATAGCAAATTGGAGGAGAGT
AAAGTGGTTGTGCAGTCGAAAGATAAGATCATTGAGGACGAAGGGAAAGCGCGTCATGAT
CTTGAAGAAAAGCTGAAAAAGGCTGATTCTATAGCAGAAGAATTGAGGAACACTGCTAAA
TTTGATGCTCAAAGGCACTCTAATGAGATCTCCAAACACAAGACTGCATTCATTGAATTG
GTGTCTAATCAGCGGCAGCTTGAAGCGGAGATGGGGCGTGCGCTCAGACAAGCTGAAGCA
GCAAAGCAAGAGGTTAATTCGGTACTTGAGCAAAAGGAGCAGGCTATCTTGATGACCCAA
AAACTATCGATGGAGCTAGTCAAAATGCGCAAGGATTTGGAACAGAAAGAACAGATTTTG
TCAGCTATGCTGAGGAAATCCAAATTGGATACAACAGAGAAACAAATGCTTTTAAAGGAG
ATCAAATTATCAAAAGCCAAGAGAAAGCAAGCTGAGCTAGAGACTGAGAGATGGAAGACA
GCTTCAGAGTCTAGGTATGAGAGACATTCATTGAGAAATATGCTGTACAAACGTATGAAT
CCGAAGTTGGAGGTTGTTGCCAGTGGGAAAGGGATGCTTTCAAGTGCAATGATGCTACCA
ACTGGAAAAAGTAGATCACAGAAGGCTGATTATCTTCTCGACGAGCAACCTGGGGGTACA
AAAGAGCCAGAACTATTTCCTCATGTTCCTGATAAATTCTTGGCTGAGGATGCTGAAGAA
GAAATACTCACAGATGATGTTGAGCACTTGGAGAATTGGGTTCGATCAGAGGCTGAAAAG
TACAGTGTTGCAGTTGAGCACAGGCATCATCTGGAGCTGGATGCTTTTGCAGAACAACTG
AGACTCAAAGATGAGAGGTTAGAAGCTTTTCGATGGCGCCTACTCAGTATGGAACTTGAG
TCAAAGAGGTTGCAGTCACATATTGAAGTGCTGGACCATGATCTAGCTCAGCTCCGGCAA
GATAATATGAAGTTGGATGCATTGCTATTGAATCGAGAAGTAGAAGTACAATCTCTCAAA
CAGCAACTCGCGGAATATTTTCACCTTCCTGATTCCCAGAAATCCAATGCAAATGCTTGT
CCAAAAGAGCAGGACAAAACCAATCATACAGTTTGGTCCAACGTGACACTTATAAAGACA
AAGCCAGGTGAGAAAGAGCAAGAAACAAAGAACCATCCTGAGGAAACCTCTCAAAAGGTA
AAAAATGGAAGAAAAGTTGAGACCAGAACAAATAACCCACAAAAAGACATAATTTTGACT
CTACAGTCTCCTACAAAGGAGATTGGTGAGGCGAAAGATGGAGTGTCACATCCGAATGCT
TCTAAGGCAGAACACTTCAGCACAGAGGATGCTCGGAATGCTGAAACATCAACTTCAGAA
TGTGATAGCGAAATTAAGAAAAACAAGTCACTGTGGAGGATGGATTTACATGCTCTTGGA
GTTTCATACAAAATCAAGAGGCTGACTCAACAATTTGTCATGCTTGAGAGGTTGAGAGGC
AAACAAGAACCTGCTGGAAATAGTGAAAACAATGATAATGGACGATCTGGCACTAGAGGA
TTCCGTGCGTTGATGTCTTTACTGAATAAACAAGTTGCTCGTTACGAGTCCCTTCAGGGG
AAAATCGATGATCTATGCAAGCGGATGCATGAGAATGACCTGAATGTAAATTGTGAAGGT
TCAGTTATACGAAAAACGAAGGAAGAAACTAAGATGCTTGAGCACTTTCTTGAAGAAACA
TTTCAATTACAAAGATACATAGTTGCAACAGGGCAAAAATTGATGGAAGTCCAAACAAAA
ATTGCTTCTGGATTTGTCGTAGCTGCAGAAGAACTTGATACACCAGCAAGCTTTGATGTC
AAACGGTTTGCTGATGGCATTAGAACTCTCTTTAGAGAAGTTCAGAGAGGCCTTGAAGTT
CGTGTATCTCGAATTATAGGTGATCTTGAAGGAACTTTGGCCTGTGATGGCATCACATAT
TTCAAGAGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400032325
PEP Infomation

pacid=37461545 transcript=PGSC0003DMT400047727 locus=PGSC0003DMG400018550 ID=PGSC0003DMT400047727.v4.03 annot-version=v4.03
Sequence

MDEKGVLSSCLITSEGRRESLCPIYFGVSCAFVALGLLPEPEKCDENLLEVRNKMLQGSA
HLLGLLVWRVQRDEARNEKSGLLLKLANAEKKIDELKGLRREDAKANEKVVCIYAAQEQC
WFNERKKLRQQIGAFMNELRVVEKHKDTLIAELDSKLEESKVVVQSKDKIIEDEGKARHD
LEEKLKKADSIAEELRNTAKFDAQRHSNEISKHKTAFIELVSNQRQLEAEMGRALRQAEA
AKQEVNSVLEQKEQAILMTQKLSMELVKMRKDLEQKEQILSAMLRKSKLDTTEKQMLLKE
IKLSKAKRKQAELETERWKTASESRYERHSLRNMLYKRMNPKLEVVASGKGMLSSAMMLP
TGKSRSQKADYLLDEQPGGTKEPELFPHVPDKFLAEDAEEEILTDDVEHLENWVRSEAEK
YSVAVEHRHHLELDAFAEQLRLKDERLEAFRWRLLSMELESKRLQSHIEVLDHDLAQLRQ
DNMKLDALLLNREVEVQSLKQQLAEYFHLPDSQKSNANACPKEQDKTNHTVWSNVTLIKT
KPGEKEQETKNHPEETSQKVKNGRKVETRTNNPQKDIILTLQSPTKEIGEAKDGVSHPNA
SKAEHFSTEDARNAETSTSECDSEIKKNKSLWRMDLHALGVSYKIKRLTQQFVMLERLRG
KQEPAGNSENNDNGRSGTRGFRALMSLLNKQVARYESLQGKIDDLCKRMHENDLNVNCEG
SVIRKTKEETKMLEHFLEETFQLQRYIVATGQKLMEVQTKIASGFVVAAEELDTPASFDV
KRFADGIRTLFREVQRGLEVRVSRIIGDLEGTLACDGITYFKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400047727
Transcript Infomation

pacid=37461545 locus=PGSC0003DMG400018550 ID=PGSC0003DMT400047727.v4.03 annot-version=v4.03
Sequence

ATGGATGAAAAGGGTGTCTTAAGTTCCTGTTTGATTACATCAGAAGGGAGAAGGGAGAGC
TTATGTCCAATTTACTTTGGTGTTTCTTGTGCATTTGTTGCTCTTGGGCTCTTACCGGAG
CCCGAAAAATGTGATGAGAATTTGTTAGAAGTGAGAAATAAGATGCTTCAAGGAAGTGCT
CATCTTTTGGGGTTGCTTGTGTGGAGAGTTCAGAGGGATGAAGCAAGAAATGAAAAGTCT
GGATTGTTACTTAAGTTAGCGAATGCAGAGAAAAAAATCGACGAACTGAAGGGGTTAAGA
AGGGAGGATGCTAAAGCAAATGAGAAAGTTGTGTGCATATATGCAGCACAAGAGCAGTGT
TGGTTTAATGAGAGGAAGAAACTTAGGCAGCAAATTGGTGCTTTTATGAATGAGTTGAGA
GTTGTTGAGAAGCACAAGGACACCCTTATTGCTGAATTGGATAGCAAATTGGAGGAGAGT
AAAGTGGTTGTGCAGTCGAAAGATAAGATCATTGAGGACGAAGGGAAAGCGCGTCATGAT
CTTGAAGAAAAGCTGAAAAAGGCTGATTCTATAGCAGAAGAATTGAGGAACACTGCTAAA
TTTGATGCTCAAAGGCACTCTAATGAGATCTCCAAACACAAGACTGCATTCATTGAATTG
GTGTCTAATCAGCGGCAGCTTGAAGCGGAGATGGGGCGTGCGCTCAGACAAGCTGAAGCA
GCAAAGCAAGAGGTTAATTCGGTACTTGAGCAAAAGGAGCAGGCTATCTTGATGACCCAA
AAACTATCGATGGAGCTAGTCAAAATGCGCAAGGATTTGGAACAGAAAGAACAGATTTTG
TCAGCTATGCTGAGGAAATCCAAATTGGATACAACAGAGAAACAAATGCTTTTAAAGGAG
ATCAAATTATCAAAAGCCAAGAGAAAGCAAGCTGAGCTAGAGACTGAGAGATGGAAGACA
GCTTCAGAGTCTAGGTATGAGAGACATTCATTGAGAAATATGCTGTACAAACGTATGAAT
CCGAAGTTGGAGGTTGTTGCCAGTGGGAAAGGGATGCTTTCAAGTGCAATGATGCTACCA
ACTGGAAAAAGTAGATCACAGAAGGCTGATTATCTTCTCGACGAGCAACCTGGGGGTACA
AAAGAGCCAGAACTATTTCCTCATGTTCCTGATAAATTCTTGGCTGAGGATGCTGAAGAA
GAAATACTCACAGATGATGTTGAGCACTTGGAGAATTGGGTTCGATCAGAGGCTGAAAAG
TACAGTGTTGCAGTTGAGCACAGGCATCATCTGGAGCTGGATGCTTTTGCAGAACAACTG
AGACTCAAAGATGAGAGGTTAGAAGCTTTTCGATGGCGCCTACTCAGTATGGAACTTGAG
TCAAAGAGGTTGCAGTCACATATTGAAGTGCTGGACCATGATCTAGCTCAGCTCCGGCAA
GATAATATGAAGTTGGATGCATTGCTATTGAATCGAGAAGTAGAAGTACAATCTCTCAAA
CAGCAACTCGCGGAATATTTTCACCTTCCTGATTCCCAGAAATCCAATGCAAATGCTTGT
CCAAAAGAGCAGGACAAAACCAATCATACAGTTTGGTCCAACGTGACACTTATAAAGACA
AAGCCAGGTGAGAAAGAGCAAGAAACAAAGAACCATCCTGAGGAAACCTCTCAAAAGGTA
AAAAATGGAAGAAAAGTTGAGACCAGAACAAATAACCCACAAAAAGACATAATTTTGACT
CTACAGTCTCCTACAAAGGAGATTGGTGAGGCGAAAGATGGAGTGTCACATCCGAATGCT
TCTAAGGCAGAACACTTCAGCACAGAGGATGCTCGGAATGCTGAAACATCAACTTCAGAA
TGTGATAGCGAAATTAAGAAAAACAAGTCACTGTGGAGGATGGATTTACATGCTCTTGGA
GTTTCATACAAAATCAAGAGGCTGACTCAACAATTTGTCATGCTTGAGAGGTTGAGAGGC
AAACAAGAACCTGCTGGAAATAGTGAAAACAATGATAATGGACGATCTGGCACTAGAGGA
TTCCGTGCGTTGATGTCTTTACTGAATAAACAAGTTGCTCGTTACGAGTCCCTTCAGGGG
AAAATCGATGATCTATGCAAGCGGATGCATGAGAATGACCTGAATGTAAATTGTGAAGGT
TCAGTTATACGAAAAACGAAGGAAGAAACTAAGATGCTTGAGCACTTTCTTGAAGAAACA
TTTCAATTACAAAGATACATAGTTGCAACAGGGCAAAAATTGATGGAAGTCCAAACAAAA
ATTGCTTCTGGATTTGTCGTAGCTGCAGAAGAACTTGATACACCAGCAAGCTTTGATGTC
AAACGGTTTGCTGATGGCATTAGAACTCTCTTTAGAGAAGTTCAGAGAGGCCTTGAAGTT
CGTGTATCTCGAATTATAGGTGATCTTGAAGGAACTTTGGCCTGTGATGGCATCACATAT
TTCAAGAGATAG