Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047710
CDS Infomation

pacid=37463711 polypeptide=PGSC0003DMP400032316 locus=PGSC0003DMG400018544 ID=PGSC0003DMT400047710.v4.03 annot-version=v4.03
Sequence

ATGGCTACTGCGTTGAAGAGACGCGCATCCTCGATCGTTTTCGCAATCGTCCTTTTAGGG
AGCTTGTTTGCATTCTCTATAGCTAAAGAAGAAGCTACCAAGTTAGGAACCGTTATTGGC
ATAGATCTTGGAACAACTTATTCTTGTGTTGGAGTTTACAAGAATGGACATGTTGAGATC
ATAGCAAATGACCAAGGTAATCGTATCACCCCTTCATGGGTAGCCTTCACTGATGGTGAG
AGACTGATCGGTGAAGCAGCTAAAAATCAAGCAGCTGTTAATCCAGAGAGGACTGTCTTT
GACGTCAAAAGACTTATCGGGAGAAAGTTTGAAGACAAAGAAGTACAAAGGGACATGAAA
CTTGTTCCCTATAAGATTGTTAACAGGGATGGGAAACCATATATCCAAGTTAAAATCAAA
GATGGGGAGACCAAGGTCTTCAGTCCTGAGGAGGTCAGTGCTATGATTCTGATCAAGATG
AAAGAAACAGCAGAAGCTTTTCTTGGAAAGACAATCAAGGATGCAGTTGTCACTGTTCCA
GCATACTTCAATGATGCCCAGAGGCAGGCCACTAAGGATGCCGGTGTCATTGCTGGTTTG
AACGTGGCAAGAATCATTAATGAACCAACTGCAGCTGCCATTGCCTATGGATTAGATAAG
AAAGGTGGTGAAAAGAACATCCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTTAGT
ATCCTTACTATTGACAATGGTGTTTTTGAGGTTCTTGCCACAAATGGAGACACTCATCTA
GGAGGAGAGGATTTTGACCAGAGGATTATGGAGTATTTCATTAAATTGATAAAGAAGAAG
CATGGTAAGGACATTAGCAAGGATAACAAGGCTTTGGGAAAGCTCAGGAGAGAAGCTGAG
CGTGCCAAGAGAGCCCTGAGCAGTCAGCATCAAGTCAGGGTAGAGATTGAGTCTCTCTTC
GATGGTGTGGATTTCTCTGAACCACTTACCCGGGCTCGTTTTGAGGAGCTGAACAATGAT
TTGTTCCGTAAGACAATGACTCCTGTCAAGAAGGCTATGGAGGATGCTGGTCTAGCAAAG
AACCAGATTGATGAGATTGTCTTGGTTGGTGGAAGTACCAGGATTCCAAAAGTTCAACAG
CTTTTGAAAGATTACTTTGATGGCAAGGAGCCTAGCAAAGGTGTCAACCCCGATGAAGCA
GTTGCTTTTGGTGCAGCTGTACAAGGAGGTATCTTGAGTGGAGAAGGAGGTGACGAAACC
AAAGATATTCTTCTCTTGGATGTGGCTCCACTGACTCTTGGTATTGAAACTGTTGGAGGA
GTGATGACAAAGTTGATCCCAAGAAACACTGTCATTCCTACTAAGAAGTCTCAAGTCTTC
ACCACTTACCAGGACCAGCAGACAACCGTCACAATTTCGGTGTTTGAAGGTGAACGCAGT
ATGGTAAAGGACTGTAGACTACTGGGGAAGTTTGACTTGACAGGAATACCTCCAGCACCA
AGAGGAACACCTCAAATCGAAGTAACTTTTGAGGTTGATGCCAATGGTATCCTAAACGTG
AAAGCTGAGGATAAAGCCTCTGGAAAGTCAGAAAAGATTACCATCACGAATGACAAGGGT
CGTTTGAGTCAAGAAGAAATTGAACGTATGGTGAAGGAGGCTGAGGAGTTTGCCGAGGAG
GACAAGAAGGTGAAAGAAAGAGTTGATGCCCGAAATAGCCTGGAGACATACGTATACAAC
ATGAGGAACCAAATCAATGACAAGGACAAACTTGCAGACAAGTTAGAGTCTGATGAGAAG
GAGAAGATTGAAACCGCCACAAAAGAAGCACTTGAATGGTTAGACGACAACCAGAATGCT
GAGAAGGAGGATTATGAAGAGAAGCTGAAAGAAGTTGAGGCAGTGTGCAACCCAATTATC
ACGGCTGTGTATCAGAGGTCTGGTGGAGCACCAGGAGGTGCCAGTGAGGATTCCAACGAG
GACGATGATTCACATGATGAGCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400032316
PEP Infomation

pacid=37463711 transcript=PGSC0003DMT400047710 locus=PGSC0003DMG400018544 ID=PGSC0003DMT400047710.v4.03 annot-version=v4.03
Sequence

MATALKRRASSIVFAIVLLGSLFAFSIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEI
IANDQGNRITPSWVAFTDGERLIGEAAKNQAAVNPERTVFDVKRLIGRKFEDKEVQRDMK
LVPYKIVNRDGKPYIQVKIKDGETKVFSPEEVSAMILIKMKETAEAFLGKTIKDAVVTVP
AYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVS
ILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNKALGKLRREAE
RAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMTPVKKAMEDAGLAK
NQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPSKGVNPDEAVAFGAAVQGGILSGEGGDET
KDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVTISVFEGERS
MVKDCRLLGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNDKG
RLSQEEIERMVKEAEEFAEEDKKVKERVDARNSLETYVYNMRNQINDKDKLADKLESDEK
EKIETATKEALEWLDDNQNAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGGASEDSNE
DDDSHDEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400047710
Transcript Infomation

pacid=37463711 locus=PGSC0003DMG400018544 ID=PGSC0003DMT400047710.v4.03 annot-version=v4.03
Sequence

ATGGCTACTGCGTTGAAGAGACGCGCATCCTCGATCGTTTTCGCAATCGTCCTTTTAGGG
AGCTTGTTTGCATTCTCTATAGCTAAAGAAGAAGCTACCAAGTTAGGAACCGTTATTGGC
ATAGATCTTGGAACAACTTATTCTTGTGTTGGAGTTTACAAGAATGGACATGTTGAGATC
ATAGCAAATGACCAAGGTAATCGTATCACCCCTTCATGGGTAGCCTTCACTGATGGTGAG
AGACTGATCGGTGAAGCAGCTAAAAATCAAGCAGCTGTTAATCCAGAGAGGACTGTCTTT
GACGTCAAAAGACTTATCGGGAGAAAGTTTGAAGACAAAGAAGTACAAAGGGACATGAAA
CTTGTTCCCTATAAGATTGTTAACAGGGATGGGAAACCATATATCCAAGTTAAAATCAAA
GATGGGGAGACCAAGGTCTTCAGTCCTGAGGAGGTCAGTGCTATGATTCTGATCAAGATG
AAAGAAACAGCAGAAGCTTTTCTTGGAAAGACAATCAAGGATGCAGTTGTCACTGTTCCA
GCATACTTCAATGATGCCCAGAGGCAGGCCACTAAGGATGCCGGTGTCATTGCTGGTTTG
AACGTGGCAAGAATCATTAATGAACCAACTGCAGCTGCCATTGCCTATGGATTAGATAAG
AAAGGTGGTGAAAAGAACATCCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTTAGT
ATCCTTACTATTGACAATGGTGTTTTTGAGGTTCTTGCCACAAATGGAGACACTCATCTA
GGAGGAGAGGATTTTGACCAGAGGATTATGGAGTATTTCATTAAATTGATAAAGAAGAAG
CATGGTAAGGACATTAGCAAGGATAACAAGGCTTTGGGAAAGCTCAGGAGAGAAGCTGAG
CGTGCCAAGAGAGCCCTGAGCAGTCAGCATCAAGTCAGGGTAGAGATTGAGTCTCTCTTC
GATGGTGTGGATTTCTCTGAACCACTTACCCGGGCTCGTTTTGAGGAGCTGAACAATGAT
TTGTTCCGTAAGACAATGACTCCTGTCAAGAAGGCTATGGAGGATGCTGGTCTAGCAAAG
AACCAGATTGATGAGATTGTCTTGGTTGGTGGAAGTACCAGGATTCCAAAAGTTCAACAG
CTTTTGAAAGATTACTTTGATGGCAAGGAGCCTAGCAAAGGTGTCAACCCCGATGAAGCA
GTTGCTTTTGGTGCAGCTGTACAAGGAGGTATCTTGAGTGGAGAAGGAGGTGACGAAACC
AAAGATATTCTTCTCTTGGATGTGGCTCCACTGACTCTTGGTATTGAAACTGTTGGAGGA
GTGATGACAAAGTTGATCCCAAGAAACACTGTCATTCCTACTAAGAAGTCTCAAGTCTTC
ACCACTTACCAGGACCAGCAGACAACCGTCACAATTTCGGTGTTTGAAGGTGAACGCAGT
ATGGTAAAGGACTGTAGACTACTGGGGAAGTTTGACTTGACAGGAATACCTCCAGCACCA
AGAGGAACACCTCAAATCGAAGTAACTTTTGAGGTTGATGCCAATGGTATCCTAAACGTG
AAAGCTGAGGATAAAGCCTCTGGAAAGTCAGAAAAGATTACCATCACGAATGACAAGGGT
CGTTTGAGTCAAGAAGAAATTGAACGTATGGTGAAGGAGGCTGAGGAGTTTGCCGAGGAG
GACAAGAAGGTGAAAGAAAGAGTTGATGCCCGAAATAGCCTGGAGACATACGTATACAAC
ATGAGGAACCAAATCAATGACAAGGACAAACTTGCAGACAAGTTAGAGTCTGATGAGAAG
GAGAAGATTGAAACCGCCACAAAAGAAGCACTTGAATGGTTAGACGACAACCAGAATGCT
GAGAAGGAGGATTATGAAGAGAAGCTGAAAGAAGTTGAGGCAGTGTGCAACCCAATTATC
ACGGCTGTGTATCAGAGGTCTGGTGGAGCACCAGGAGGTGCCAGTGAGGATTCCAACGAG
GACGATGATTCACATGATGAGCTGTAA