Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047658
CDS Infomation

pacid=37463755 polypeptide=PGSC0003DMP400032277 locus=PGSC0003DMG400018521 ID=PGSC0003DMT400047658.v4.03 annot-version=v4.03
Sequence

ATGGGTAGCTTCAGTGATGATGAAGGGGAATGTCGATTTTTCGATGCCCCGGATAGTATT
TCCCAGGGATCTGATTTGGGTTCTAACTTTACCCCAATTCCTGATTCTGGCTCTGGGGTT
GTCAATGGTGTTAGCTATGATGAGTGGATTAAAACCCCCAGAAGTGTTGTTGAGCGGCGT
AAGCAATTCCGTTGTTGGATGGGTTTAAGTTTAGATGGAATGTCTGGAGAAGATCCAGTA
GATATAGGTGGAAGCTCCAATTTATCTACTGGGGAAATTGAAAGAATTATGGAGAGTAGT
GGAGCTGTATTACGAACCTCAATTCATAAGGACGAGTTTTCTTCTTACCGGTCTTCTAGG
TCTGGTTTGTGTGGGGGCGAAGGTTTGGATTCACCTAAACAGTTGGGTTCAAATCGGAAT
TTTTCATTTAGAAGTGGCAATGTTGATAGTGGAATTGGGTGCAATGTACATGTTCAGGCA
GAGAACGGCCAGCAGAGCAATAACAGGCCTGTAAGATTGGAACGACTGCTAATGTCTCGT
GAACCCGAGAACTCTTCATGTATGTCCCCCGTTATTGGTGAACCTGGACAGGGAGAATTG
GATAAAAATGGAGACACACCGAAGAAACTAAATGGAGTTAAGAGTCGGTTATTAAGCAGG
CTACGGTCATTTACGTGCATAGCAAATGCCGAAGGGAGATGTCTTGAATTGAAGGATAAC
AGTTCCAACCCTGTTCAGAGGTCTAGAGTTCAGAGGGTTAAAGTTCACCATTGTAAGAAG
CGGTTGAAGGAACTCTCTGCTCTTTTCATGGGGCAGGATATCCAGGCTCATGAGGGTTCA
ATTTTAACTATGAAATTCAGTTTTGATGGACAGTACCTCGCTAGTGCTGGTGAAGATAAG
ATTGTGCGGGTGTGGCAAGTGGTTGAAGATGAGAGATCCAATGAATTTGATATCCCAGAG
TTGGATCCTTCATGTATGTATTTCACGGTGAATCATCTTTCACAATTGGCTCCTCTGGTG
ACAGATAAAGAGAAAAGTAGTAGTATGTTGAAGGGCCTTAAGAAAACAAGAGACTCTGCT
TGTGTCGTTTTCCCTCCAAAGGTCTTTCGAATTCTGGAAAAACCGCTGCATGTGTTCCAA
GGGCATACTGGGGAGATATTGGATCTCTCGTGGTCAAAAAATAATTGTTTGCTCTCATCA
TCAACTGACAAAACTGTTCGTCTGTGGCAAGTTGGAAATGATCTGTGCCTCAGAGTTTTT
TCACATAGTAATTATGTGACTTGCATACAGTTTAACCCAGTGAATGATGAATACTTCATC
AGTGGATCAATAGATGGGAAAATTCGAATTTGGGCCGTTAACAGCTGTCAAGTATTGGAT
TGGACGGACATCAGAGACATAGTGACTGCTGTTTCCTATCGTCCTGATGGAAAGGGTGGG
ATTATTGGCTCAATGGCAGGCAGTTGCCGTTTTTTCAGTTTGGAAGGTCATGAGATACAA
TTAGACGAGCAGATGTGCTTGGCCAATAAAAAGAAGTCGATTTGCGAAAGGATTACTGGC
TTTCAGTTTTTTCCACAAGACCCATCAAAAGTTATGGTTACTTGTGCTGACTCTCACGTC
AGAATCCTAGATGGTGTCAATGTGATCGGCAAGTACAAAGGTCCGCGAACTGCAGGAAAC
CATCTCTCTGCCTCTTTCACCTTGGATGGGAAGCATATTGTCTCAGCGTCTGAAGATTCT
AATGTCTATGTATGGAACTGTGACGTTCCCAAAGATTATGTGTCTCAACCTAAAGTGGTG
AGGTCATCTGAGTTCTTCTCCAGTGATTCCACCATTGCAATACCCTGGTCCGGCTTGAAA
ACTGTAAATCCAGATAATGGACGGCATTGTGGAGGAGGACTAAGTCAAACTTCAAACAAC
ATATTACCCTTCATTTCCTCTCCTTATCTTTCTTTGGGAAGTGAGTTGTTCCTTGAGGCA
ATTCCAAAAGGATCAGCAACCTGGCCTGAAGAGAAGCTTCCCGTGTCAAGTCCCCGGTCA
ACGTCTTCTGGGATGTGCAAATCTGAATACAAATTTCTGAAAAGTTCTTGCCAGAGTTCA
TCCGATTCTCATGCCTGGGGTTTAGTTATTGTTACTGCTGGCTACGATGGGAGAATACGA
TCATTTCATAATTATGGGTTGCCTTTGCCACTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032277
PEP Infomation

pacid=37463755 transcript=PGSC0003DMT400047658 locus=PGSC0003DMG400018521 ID=PGSC0003DMT400047658.v4.03 annot-version=v4.03
Sequence

MGSFSDDEGECRFFDAPDSISQGSDLGSNFTPIPDSGSGVVNGVSYDEWIKTPRSVVERR
KQFRCWMGLSLDGMSGEDPVDIGGSSNLSTGEIERIMESSGAVLRTSIHKDEFSSYRSSR
SGLCGGEGLDSPKQLGSNRNFSFRSGNVDSGIGCNVHVQAENGQQSNNRPVRLERLLMSR
EPENSSCMSPVIGEPGQGELDKNGDTPKKLNGVKSRLLSRLRSFTCIANAEGRCLELKDN
SSNPVQRSRVQRVKVHHCKKRLKELSALFMGQDIQAHEGSILTMKFSFDGQYLASAGEDK
IVRVWQVVEDERSNEFDIPELDPSCMYFTVNHLSQLAPLVTDKEKSSSMLKGLKKTRDSA
CVVFPPKVFRILEKPLHVFQGHTGEILDLSWSKNNCLLSSSTDKTVRLWQVGNDLCLRVF
SHSNYVTCIQFNPVNDEYFISGSIDGKIRIWAVNSCQVLDWTDIRDIVTAVSYRPDGKGG
IIGSMAGSCRFFSLEGHEIQLDEQMCLANKKKSICERITGFQFFPQDPSKVMVTCADSHV
RILDGVNVIGKYKGPRTAGNHLSASFTLDGKHIVSASEDSNVYVWNCDVPKDYVSQPKVV
RSSEFFSSDSTIAIPWSGLKTVNPDNGRHCGGGLSQTSNNILPFISSPYLSLGSELFLEA
IPKGSATWPEEKLPVSSPRSTSSGMCKSEYKFLKSSCQSSSDSHAWGLVIVTAGYDGRIR
SFHNYGLPLPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400047658
Transcript Infomation

pacid=37463755 locus=PGSC0003DMG400018521 ID=PGSC0003DMT400047658.v4.03 annot-version=v4.03
Sequence

ATGGGTAGCTTCAGTGATGATGAAGGGGAATGTCGATTTTTCGATGCCCCGGATAGTATT
TCCCAGGGATCTGATTTGGGTTCTAACTTTACCCCAATTCCTGATTCTGGCTCTGGGGTT
GTCAATGGTGTTAGCTATGATGAGTGGATTAAAACCCCCAGAAGTGTTGTTGAGCGGCGT
AAGCAATTCCGTTGTTGGATGGGTTTAAGTTTAGATGGAATGTCTGGAGAAGATCCAGTA
GATATAGGTGGAAGCTCCAATTTATCTACTGGGGAAATTGAAAGAATTATGGAGAGTAGT
GGAGCTGTATTACGAACCTCAATTCATAAGGACGAGTTTTCTTCTTACCGGTCTTCTAGG
TCTGGTTTGTGTGGGGGCGAAGGTTTGGATTCACCTAAACAGTTGGGTTCAAATCGGAAT
TTTTCATTTAGAAGTGGCAATGTTGATAGTGGAATTGGGTGCAATGTACATGTTCAGGCA
GAGAACGGCCAGCAGAGCAATAACAGGCCTGTAAGATTGGAACGACTGCTAATGTCTCGT
GAACCCGAGAACTCTTCATGTATGTCCCCCGTTATTGGTGAACCTGGACAGGGAGAATTG
GATAAAAATGGAGACACACCGAAGAAACTAAATGGAGTTAAGAGTCGGTTATTAAGCAGG
CTACGGTCATTTACGTGCATAGCAAATGCCGAAGGGAGATGTCTTGAATTGAAGGATAAC
AGTTCCAACCCTGTTCAGAGGTCTAGAGTTCAGAGGGTTAAAGTTCACCATTGTAAGAAG
CGGTTGAAGGAACTCTCTGCTCTTTTCATGGGGCAGGATATCCAGGCTCATGAGGGTTCA
ATTTTAACTATGAAATTCAGTTTTGATGGACAGTACCTCGCTAGTGCTGGTGAAGATAAG
ATTGTGCGGGTGTGGCAAGTGGTTGAAGATGAGAGATCCAATGAATTTGATATCCCAGAG
TTGGATCCTTCATGTATGTATTTCACGGTGAATCATCTTTCACAATTGGCTCCTCTGGTG
ACAGATAAAGAGAAAAGTAGTAGTATGTTGAAGGGCCTTAAGAAAACAAGAGACTCTGCT
TGTGTCGTTTTCCCTCCAAAGGTCTTTCGAATTCTGGAAAAACCGCTGCATGTGTTCCAA
GGGCATACTGGGGAGATATTGGATCTCTCGTGGTCAAAAAATAATTGTTTGCTCTCATCA
TCAACTGACAAAACTGTTCGTCTGTGGCAAGTTGGAAATGATCTGTGCCTCAGAGTTTTT
TCACATAGTAATTATGTGACTTGCATACAGTTTAACCCAGTGAATGATGAATACTTCATC
AGTGGATCAATAGATGGGAAAATTCGAATTTGGGCCGTTAACAGCTGTCAAGTATTGGAT
TGGACGGACATCAGAGACATAGTGACTGCTGTTTCCTATCGTCCTGATGGAAAGGGTGGG
ATTATTGGCTCAATGGCAGGCAGTTGCCGTTTTTTCAGTTTGGAAGGTCATGAGATACAA
TTAGACGAGCAGATGTGCTTGGCCAATAAAAAGAAGTCGATTTGCGAAAGGATTACTGGC
TTTCAGTTTTTTCCACAAGACCCATCAAAAGTTATGGTTACTTGTGCTGACTCTCACGTC
AGAATCCTAGATGGTGTCAATGTGATCGGCAAGTACAAAGGTCCGCGAACTGCAGGAAAC
CATCTCTCTGCCTCTTTCACCTTGGATGGGAAGCATATTGTCTCAGCGTCTGAAGATTCT
AATGTCTATGTATGGAACTGTGACGTTCCCAAAGATTATGTGTCTCAACCTAAAGTGGTG
AGGTCATCTGAGTTCTTCTCCAGTGATTCCACCATTGCAATACCCTGGTCCGGCTTGAAA
ACTGTAAATCCAGATAATGGACGGCATTGTGGAGGAGGACTAAGTCAAACTTCAAACAAC
ATATTACCCTTCATTTCCTCTCCTTATCTTTCTTTGGGAAGTGAGTTGTTCCTTGAGGCA
ATTCCAAAAGGATCAGCAACCTGGCCTGAAGAGAAGCTTCCCGTGTCAAGTCCCCGGTCA
ACGTCTTCTGGGATGTGCAAATCTGAATACAAATTTCTGAAAAGTTCTTGCCAGAGTTCA
TCCGATTCTCATGCCTGGGGTTTAGTTATTGTTACTGCTGGCTACGATGGGAGAATACGA
TCATTTCATAATTATGGGTTGCCTTTGCCACTTTGA