Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047643
CDS Infomation

pacid=37461370 polypeptide=PGSC0003DMP400032266 locus=PGSC0003DMG400018516 ID=PGSC0003DMT400047643.v4.03 annot-version=v4.03
Sequence

ATGCCAGAGGATCCATCCAACGATGTTTTTCTCGTCCCAGCTTCAGAAGTTGTCACTGAA
ATAACTCGACTTGTATTTGAAACAATAGAGGCTACAAATTCTGTTGTTGTGCAGAAGGAG
AACTTCAGTAAATTTTCAAAATTCTTGGAGAAGATTGCTTTGGTCCTAAAAGAGTTATCT
AAGTCTGAAACTAGTGAAATTAATAACTTAAGTCCTGCTTTTGAGGATCTCAAGTTGGAG
ATAGAAGTGATCAAACAACTAGCTTTGGACTGCAGAAATAGAAACAAAATCTATCTCTTA
CTAAATTGTAGGAGAATCGTCAAGTATTTTGAGAGTAGTACGAGGGATATTAGTCGGACT
TTGTTGCTAATAACTTCGGAACATCTGAATGTTTTACCTGAAATCACTGACCAGCTTAAA
GATCTATGCAAGAACATGCTGGATACTGAGTATGAAGTCTCTAAAGAGGAGGAAGAAGTT
TCGGAGAAAATTGAATCAGGGATACAAGAGAGGAATATTGATAGATCCTATGCAAATGAT
TTGCTCATTTGTATTGCTAGAGCTGTTGGAATAGCAAATGAGCAATCAGTGCTGAAGAGA
GAATTTGGAAATTTCAAGGCAGAAATTGCAAGTAGCGAACAAGGGAAGAACCTGACGGAG
ACATTACGGATGGAAGAGATTATTCTCTTGCTTGGCAAGGCTGACTTGCTTACAACTGCA
GAAGAAAAACAGACAAATTATTTGACTAAAAGAAACTCTTTGGGTAGGCAACCATTAGAA
CCTTTGCAGTCATTTTACTGCCCAATTACTGGAGATGTCATGGAAGATCCGGTGGAGACT
TCTTCTGGGCAGATATTTGAAAGGATAGCTATCGAGAAGTGGTTAGCAGATGGCAATAAG
CTGTGTCCCTTGACCAAAAAACACTTGAAAAAGTCAGATCTTCGGTCCAATAAAACCCTG
CGTCAGTCAATTGAAGAATGGAAAAACAGAAACATCATGATCACCATTGCGTCCCTAAAA
CTGAAAATTCAAACAAACAATGAGGAAGAAGTGCTTCAATCTTTACAGAAGTTGCTGGAG
TTGTGTGTAAGGAGTGAGTTGCAGAGAGAATGGATCGTGATGGAGAATTACGTTCCAGTT
ACTATAGATCTTCTACGTGCAAATAATACTGAGATAAGAAAGTATGCTTTAATGATACTT
TACGCTCTCGCAAAGGATAGTGAAGAAGGCAAGGAAAGAATAGGTACAGTAGATAATGCT
ATTGGGTTGGTAGTGCGATCTCTTGCACGCAAACCCGAAGAAAGCATATTGGCTTTGCAG
CTGCTTTTGGAGCTATCCAGAAGTAGTATAGTTCAGAACTTGATTGGCAATGTCCAGGGT
TGCATCCTTCTACTTGTTACTTTCATGAATAGTGAGGACTCTGTAGCTGCAAAGTATGCA
AGAGAAATTTTAGAGAGTCTCTCATTCCTTGATCAGAATGTTATTGAGATGGCAAGATTA
AATTATGGTGCACCCTTACTACAACATCTATGTTCAGGAACTGAAAGTAAGCTTATTATC
ATGGCCAAAACCTTGTCAGACATCCAGTTGAGCGACCAGATTAAGCTGCACCTCACAGAA
AAAGGGGCACTGAAGCCACTTCTTGAACTTCTGTCTCATAGCAATACAGAGATGAAAATC
ATTGCTGTCAAGGCACTCCAAAGCCTTTCAACTGTCCCAAAAAATGGTCAGTTGATGATA
AAGGAAGGTGTCAGTGACCTGCTATTTGAACTACTATTTTGTCACACCTTGACAACAGAA
ATACGGGAAAATGTGGCAGCAACAATTATGCAACTTGCTATATCAAAAAATTCCGAAGGA
TCAGAGGATGTGCAGGTTTCATTGTTGGAGTCTCATGACGACATCTTTAAACTCTTTTCT
CTTATATCGTTGACTGGATCTAATGTTCAACAAAGCATTCTTCGTATCTTTCAAGCAATG
TGCCAATCTCCTGCTGGTTCTGATATCCGGACCAAACTGAGACAGGTGTGTAGATCTGAT
AAAGTATCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400032266
PEP Infomation

pacid=37461370 transcript=PGSC0003DMT400047643 locus=PGSC0003DMG400018516 ID=PGSC0003DMT400047643.v4.03 annot-version=v4.03
Sequence

MPEDPSNDVFLVPASEVVTEITRLVFETIEATNSVVVQKENFSKFSKFLEKIALVLKELS
KSETSEINNLSPAFEDLKLEIEVIKQLALDCRNRNKIYLLLNCRRIVKYFESSTRDISRT
LLLITSEHLNVLPEITDQLKDLCKNMLDTEYEVSKEEEEVSEKIESGIQERNIDRSYAND
LLICIARAVGIANEQSVLKREFGNFKAEIASSEQGKNLTETLRMEEIILLLGKADLLTTA
EEKQTNYLTKRNSLGRQPLEPLQSFYCPITGDVMEDPVETSSGQIFERIAIEKWLADGNK
LCPLTKKHLKKSDLRSNKTLRQSIEEWKNRNIMITIASLKLKIQTNNEEEVLQSLQKLLE
LCVRSELQREWIVMENYVPVTIDLLRANNTEIRKYALMILYALAKDSEEGKERIGTVDNA
IGLVVRSLARKPEESILALQLLLELSRSSIVQNLIGNVQGCILLLVTFMNSEDSVAAKYA
REILESLSFLDQNVIEMARLNYGAPLLQHLCSGTESKLIIMAKTLSDIQLSDQIKLHLTE
KGALKPLLELLSHSNTEMKIIAVKALQSLSTVPKNGQLMIKEGVSDLLFELLFCHTLTTE
IRENVAATIMQLAISKNSEGSEDVQVSLLESHDDIFKLFSLISLTGSNVQQSILRIFQAM
CQSPAGSDIRTKLRQVCRSDKVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400047643
Transcript Infomation

pacid=37461370 locus=PGSC0003DMG400018516 ID=PGSC0003DMT400047643.v4.03 annot-version=v4.03
Sequence

ATGCCAGAGGATCCATCCAACGATGTTTTTCTCGTCCCAGCTTCAGAAGTTGTCACTGAA
ATAACTCGACTTGTATTTGAAACAATAGAGGCTACAAATTCTGTTGTTGTGCAGAAGGAG
AACTTCAGTAAATTTTCAAAATTCTTGGAGAAGATTGCTTTGGTCCTAAAAGAGTTATCT
AAGTCTGAAACTAGTGAAATTAATAACTTAAGTCCTGCTTTTGAGGATCTCAAGTTGGAG
ATAGAAGTGATCAAACAACTAGCTTTGGACTGCAGAAATAGAAACAAAATCTATCTCTTA
CTAAATTGTAGGAGAATCGTCAAGTATTTTGAGAGTAGTACGAGGGATATTAGTCGGACT
TTGTTGCTAATAACTTCGGAACATCTGAATGTTTTACCTGAAATCACTGACCAGCTTAAA
GATCTATGCAAGAACATGCTGGATACTGAGTATGAAGTCTCTAAAGAGGAGGAAGAAGTT
TCGGAGAAAATTGAATCAGGGATACAAGAGAGGAATATTGATAGATCCTATGCAAATGAT
TTGCTCATTTGTATTGCTAGAGCTGTTGGAATAGCAAATGAGCAATCAGTGCTGAAGAGA
GAATTTGGAAATTTCAAGGCAGAAATTGCAAGTAGCGAACAAGGGAAGAACCTGACGGAG
ACATTACGGATGGAAGAGATTATTCTCTTGCTTGGCAAGGCTGACTTGCTTACAACTGCA
GAAGAAAAACAGACAAATTATTTGACTAAAAGAAACTCTTTGGGTAGGCAACCATTAGAA
CCTTTGCAGTCATTTTACTGCCCAATTACTGGAGATGTCATGGAAGATCCGGTGGAGACT
TCTTCTGGGCAGATATTTGAAAGGATAGCTATCGAGAAGTGGTTAGCAGATGGCAATAAG
CTGTGTCCCTTGACCAAAAAACACTTGAAAAAGTCAGATCTTCGGTCCAATAAAACCCTG
CGTCAGTCAATTGAAGAATGGAAAAACAGAAACATCATGATCACCATTGCGTCCCTAAAA
CTGAAAATTCAAACAAACAATGAGGAAGAAGTGCTTCAATCTTTACAGAAGTTGCTGGAG
TTGTGTGTAAGGAGTGAGTTGCAGAGAGAATGGATCGTGATGGAGAATTACGTTCCAGTT
ACTATAGATCTTCTACGTGCAAATAATACTGAGATAAGAAAGTATGCTTTAATGATACTT
TACGCTCTCGCAAAGGATAGTGAAGAAGGCAAGGAAAGAATAGGTACAGTAGATAATGCT
ATTGGGTTGGTAGTGCGATCTCTTGCACGCAAACCCGAAGAAAGCATATTGGCTTTGCAG
CTGCTTTTGGAGCTATCCAGAAGTAGTATAGTTCAGAACTTGATTGGCAATGTCCAGGGT
TGCATCCTTCTACTTGTTACTTTCATGAATAGTGAGGACTCTGTAGCTGCAAAGTATGCA
AGAGAAATTTTAGAGAGTCTCTCATTCCTTGATCAGAATGTTATTGAGATGGCAAGATTA
AATTATGGTGCACCCTTACTACAACATCTATGTTCAGGAACTGAAAGTAAGCTTATTATC
ATGGCCAAAACCTTGTCAGACATCCAGTTGAGCGACCAGATTAAGCTGCACCTCACAGAA
AAAGGGGCACTGAAGCCACTTCTTGAACTTCTGTCTCATAGCAATACAGAGATGAAAATC
ATTGCTGTCAAGGCACTCCAAAGCCTTTCAACTGTCCCAAAAAATGGTCAGTTGATGATA
AAGGAAGGTGTCAGTGACCTGCTATTTGAACTACTATTTTGTCACACCTTGACAACAGAA
ATACGGGAAAATGTGGCAGCAACAATTATGCAACTTGCTATATCAAAAAATTCCGAAGGA
TCAGAGGATGTGCAGGTTTCATTGTTGGAGTCTCATGACGACATCTTTAAACTCTTTTCT
CTTATATCGTTGACTGGATCTAATGTTCAACAAAGCATTCTTCGTATCTTTCAAGCAATG
TGCCAATCTCCTGCTGGTTCTGATATCCGGACCAAACTGAGACAGGTGTGTAGATCTGAT
AAAGTATCTTAG