Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047629
CDS Infomation

pacid=37459392 polypeptide=PGSC0003DMP400032253 locus=PGSC0003DMG400018512 ID=PGSC0003DMT400047629.v4.03 annot-version=v4.03
Sequence

ATGAGAGCTCTCAGACGAAGTCAGACTTCGTCATCTTCAAATTCCTCTTCACCGTCTTCA
TCATCACCATCATCATCGACATCGTCGTGGATTCATTTGAGATCAGTTCTATTCGTTGTT
GCCTCCTCACCAGCTTCTTCTTCCTCTAATCGAGGTCATCTCAAATCACCATGGTCTCGT
AGAAAAAGAAAACGTGCTCTTGCACCCCAACAGTGGAGAAGCTTTTTCACACCAGAAGGA
AAACTTCGTGATGGTGGAATTAAATTTCTAAAGAAAGTCCGAAGTGGAGGTGTTGATCCT
AGTATCAGGGCCGAGGTTTGGCCATTTCTCCTGGGAGTCTACGAGTTGAACAGCTCTAAA
GAAGAAAGAGATTGTATAAGAAATCAGAAGAGGAAGGAATATGAGAGCTATCGTAGAGAA
TGTCACAGACTGCTGAAACGCAATGGGACCTTTAAAATGAGGGAAACTGGTGGAATGGGA
AGCGATGGTGAAGGAAATATCACTGAAGGGATTGATTCCCCTGATTATGACGATGTTGTT
ACTGCCCGGGAATCTCTCTCCAGTGAGGACAGGAGCACATATGTCGAGGATTCTGATAAT
CCCGGTGGTACAATGTCAGATGAATTTTCCAGTTCCAAACGAGTGACGGAGCCAAATGAT
GTCTCTGATTCCGAGTCATCAGACTCAGATTCCTCTGCAGATCCTGATATCAGTCAAACT
GTCCCCTCGGCAGAAAGCATGGATGAGAATACTGCTGAAGTGAACTCTAAGGAGGACTCT
TCTCCTTCAAAGGCAGAAGTCCAGTCACGGCCCTGCAATGCAGAAGATTTTGCTACATGG
CAACGAATAATTCGGCTTGATGCGGTTCGTGCTAACGCCGAATGGATAGCATACTCCCCA
TCTCAAGCTGTAGTATCAGAAAGCAGGGCACACCGTTTTGCAGAGGCTGTTGGGTTGAAG
GACTATGAACACCTAGAGCCCCCTAGGATCCTACATGCTGCTCGGCTAGTCTCCATTCTT
GAAGCCTATGCGCTATATGACCCTGAAATTGGTTATTGCCAGGGGATGAGCGATTTGCTG
TCACCCATAATTTCTGTAATGACAGAGGACCATGAAGCTTTTTGGTGCTTTGTTGGTTTC
ATGACGAAGGCTCGGCATAACTTCAGGCTTGATGAGGTTGGAATCAGGAGGCAGCTGAAC
ATTATTTCTAAGATCATCAAACAAAAGGATTCACATCTGTATCGACACTTGGAGAAGCTC
CAAGCAGAGGATTGCTTTTTTGTGTACAGAATGGTGGTAGTTCTTTTCAGGCGGGAATTA
TCTTTTGAGCAAACGCTCTGCCTATGGGAAGTAATGTGGGCAGACCAGGCTGCTATTAGG
GCTGGGATTGGCAAGTCTCCCTGGAGTAGGATTAGGCTGCGTGCCCCACCAACAGATGAT
CTCTTGCTTTATGCAATTGCAGCATCTGTATTGCAACGGAGGAAACAGATCATAGAGAAG
TATAGTAGTATGGATGAAATTTTAAGGGAGTGTCAGAGCATGGCTGGTCAACTGGATGTA
TGGAAGCTTCTAGATGATGCCCATGACTTGGTGGTTACTCTCCATGACAAGATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400032253
PEP Infomation

pacid=37459392 transcript=PGSC0003DMT400047629 locus=PGSC0003DMG400018512 ID=PGSC0003DMT400047629.v4.03 annot-version=v4.03
Sequence

MRALRRSQTSSSSNSSSPSSSSPSSSTSSWIHLRSVLFVVASSPASSSSNRGHLKSPWSR
RKRKRALAPQQWRSFFTPEGKLRDGGIKFLKKVRSGGVDPSIRAEVWPFLLGVYELNSSK
EERDCIRNQKRKEYESYRRECHRLLKRNGTFKMRETGGMGSDGEGNITEGIDSPDYDDVV
TARESLSSEDRSTYVEDSDNPGGTMSDEFSSSKRVTEPNDVSDSESSDSDSSADPDISQT
VPSAESMDENTAEVNSKEDSSPSKAEVQSRPCNAEDFATWQRIIRLDAVRANAEWIAYSP
SQAVVSESRAHRFAEAVGLKDYEHLEPPRILHAARLVSILEAYALYDPEIGYCQGMSDLL
SPIISVMTEDHEAFWCFVGFMTKARHNFRLDEVGIRRQLNIISKIIKQKDSHLYRHLEKL
QAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWADQAAIRAGIGKSPWSRIRLRAPPTDD
LLLYAIAASVLQRRKQIIEKYSSMDEILRECQSMAGQLDVWKLLDDAHDLVVTLHDKM*

Transcript Sequence

Transcript ID

PGSC0003DMT400047629
Transcript Infomation

pacid=37459392 locus=PGSC0003DMG400018512 ID=PGSC0003DMT400047629.v4.03 annot-version=v4.03
Sequence

ATGAGAGCTCTCAGACGAAGTCAGACTTCGTCATCTTCAAATTCCTCTTCACCGTCTTCA
TCATCACCATCATCATCGACATCGTCGTGGATTCATTTGAGATCAGTTCTATTCGTTGTT
GCCTCCTCACCAGCTTCTTCTTCCTCTAATCGAGGTCATCTCAAATCACCATGGTCTCGT
AGAAAAAGAAAACGTGCTCTTGCACCCCAACAGTGGAGAAGCTTTTTCACACCAGAAGGA
AAACTTCGTGATGGTGGAATTAAATTTCTAAAGAAAGTCCGAAGTGGAGGTGTTGATCCT
AGTATCAGGGCCGAGGTTTGGCCATTTCTCCTGGGAGTCTACGAGTTGAACAGCTCTAAA
GAAGAAAGAGATTGTATAAGAAATCAGAAGAGGAAGGAATATGAGAGCTATCGTAGAGAA
TGTCACAGACTGCTGAAACGCAATGGGACCTTTAAAATGAGGGAAACTGGTGGAATGGGA
AGCGATGGTGAAGGAAATATCACTGAAGGGATTGATTCCCCTGATTATGACGATGTTGTT
ACTGCCCGGGAATCTCTCTCCAGTGAGGACAGGAGCACATATGTCGAGGATTCTGATAAT
CCCGGTGGTACAATGTCAGATGAATTTTCCAGTTCCAAACGAGTGACGGAGCCAAATGAT
GTCTCTGATTCCGAGTCATCAGACTCAGATTCCTCTGCAGATCCTGATATCAGTCAAACT
GTCCCCTCGGCAGAAAGCATGGATGAGAATACTGCTGAAGTGAACTCTAAGGAGGACTCT
TCTCCTTCAAAGGCAGAAGTCCAGTCACGGCCCTGCAATGCAGAAGATTTTGCTACATGG
CAACGAATAATTCGGCTTGATGCGGTTCGTGCTAACGCCGAATGGATAGCATACTCCCCA
TCTCAAGCTGTAGTATCAGAAAGCAGGGCACACCGTTTTGCAGAGGCTGTTGGGTTGAAG
GACTATGAACACCTAGAGCCCCCTAGGATCCTACATGCTGCTCGGCTAGTCTCCATTCTT
GAAGCCTATGCGCTATATGACCCTGAAATTGGTTATTGCCAGGGGATGAGCGATTTGCTG
TCACCCATAATTTCTGTAATGACAGAGGACCATGAAGCTTTTTGGTGCTTTGTTGGTTTC
ATGACGAAGGCTCGGCATAACTTCAGGCTTGATGAGGTTGGAATCAGGAGGCAGCTGAAC
ATTATTTCTAAGATCATCAAACAAAAGGATTCACATCTGTATCGACACTTGGAGAAGCTC
CAAGCAGAGGATTGCTTTTTTGTGTACAGAATGGTGGTAGTTCTTTTCAGGCGGGAATTA
TCTTTTGAGCAAACGCTCTGCCTATGGGAAGTAATGTGGGCAGACCAGGCTGCTATTAGG
GCTGGGATTGGCAAGTCTCCCTGGAGTAGGATTAGGCTGCGTGCCCCACCAACAGATGAT
CTCTTGCTTTATGCAATTGCAGCATCTGTATTGCAACGGAGGAAACAGATCATAGAGAAG
TATAGTAGTATGGATGAAATTTTAAGGGAGTGTCAGAGCATGGCTGGTCAACTGGATGTA
TGGAAGCTTCTAGATGATGCCCATGACTTGGTGGTTACTCTCCATGACAAGATGTAG