Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047579
CDS Infomation

pacid=37469590 polypeptide=PGSC0003DMP400032216 locus=PGSC0003DMG400018490 ID=PGSC0003DMT400047579.v4.03 annot-version=v4.03
Sequence

ATGGCTGAATCTGCAGTGAAAATCTTGATATTGAGCATGGAGTTTGTGCTTGACAATCCA
GGATATGCGATTGGAGGAGTTCGTCACGAGATCTCGAAGGTGAAACTTGAGCTAGAGAGC
ATAGGTTCATTTATAAAAGATGCTGAGAAGTGTAAAAACCAGAATGAAGGGGTGTGTGTT
TGGGTGGTACAAGTGAGGGACGTAGCGTTTGAAGCTGAAGATATCATTGATGAGTTCTTG
TATCATGTGGATAGCATGAAAAAGAGCGGTTTTAGAGGGCGTCTAGCTGGTGTGTTTTAC
CTTCCAAAGATACTGTGGTTGAGGTATAAAACTGCCCTGGAGTTGAAGAGAATCAGATCT
GAGATTAAAGACATTGCAAAACGAAGCAAGAGGTATGATCTAAGTCACATGGAAGCATCC
TCGAACGCTGGATCAAATTCACAAAGTTGTTGTAGTTGTGTGCAAAATATTGGAGAATCT
TCACTCTTCATACAGAACGACGAAGTTATAGGGATCGATAAAGTTAAAGACTCGTTGCTG
TCAAGTTTGGAGGGAGAGGAGGCTCACCGTGTTGTCATTTCTATCGCGGGCATGGGTGGT
TCAGGTAAGACAACTTTAGTCGCGAAAGCGTATACTAGCCTGACTGTGAGGAAGAATTTT
GATTGTTGTGCTTGGGTTTCCGTCTCACAAAACAACACGATTGAGGACCTGCTCAAAAAG
CTGATCTCAGAGTTTTTCGATGAAAAGGAAGATCTGATCCCGAAAAACTTGAAGTCAATG
GACTACAGGCAGTTGGTGGAGACTCTTGTGAAGTTCTTGCACAAAAAGAGGTATATTGTT
GTATTTGATGATGTATGGAACAATAATTTCTGGAGACAAATAAGTGTTGCTCTTCCTGAT
GATAAAAACCGGAGCAGGGTCATCATAACAACGCGAAATGAAGATATTGCAGCTTACCCT
TATGGTCCTGGTGGCACACATTTTCGTTCTAAACCTTTAGCTGATGACTACGCGTGGATG
CTATTTTGCAACAAGGCGTTTTCAAGTCAGCCTAATTGCAAGTGTCCTCCTGAACTGGAG
GAAATAGGCAGGGCATTGGTGAAAAAATGTGAAGGTCTACCATTAGCAATTGTTGCTCTT
GGAGGACTAATGGGGTCTAAAGATAGGTCGGAAATGAAATGGAGGGAAGTTTACGACAGC
TTAAGTTGGCATATCAGCAACAATAAGTTACTGGATGAGGTTAAAACTGTTATGTTGTTG
AGTTTCAATGATTTGCCTTACTATCTTAAGAACTGTTTTCTGTATTGTTGTCGTTTTCCG
ATGGGAAAATGGATAGGAGCAGGCAGACTCATTAGAATGTGGATGGCTGAAGGTTTTCTG
GAAGAAAAGAACAGCCTGAATTCGGAAGAAGTCGGGAAAATTTATCTCAAGGAACTGATT
TCTAGGAACTTACTCCAGGTTGTAAAGCATCAGAGTTTTATAAGACCGAAGACTTGCAAG
TTGCATGATCTGATGTGGGAGCTAGCTCGTTCGATCTCAGAGAAGGAGAATTTCTTGTCT
ATATGTGGTGAAGAAGTACTGGAGAAAGATGAGAAAAGAGCACGTAGATTGTCCGTGTAC
AATGTTGATGGAGCGGTTAAGATGAAAGGTGATTTGACACACGTTCGATCTTTCTCTATG
TTCAATGACAAAGGGGAATCCAAGTTTTTGTTGGATGATCTTTTATCCAGGTTTAGACTA
CTGAGGGTGTTGGAGTTGAACGATGCCAAAGTTGATTCGTTACCTAATGAACTAGGTAAC
TTGTTCAATCTAAGGTACTTAAGTCTGGGTGGTACAGGAATAAAAGAGCTTCCAACGTCT
GTGAATCGACTGAGAAACCTACAGACGTTAGATATTAGGCGAACAGAAGTGAATGTACTC
CCAAATGGAATCACCGAGCTGCATAATCTGCGACATCTTCTTGCCTATGGCAAAGAGATA
TCAGCAGAACATTTTGCATATGTTAGAGGGGTGCAAGTTCCGGGTAAGCTGTGGAAGATG
AAGAACTTACAAGTTCTTAATTGCATACAGGCAAATGCGGATATAGCACGTAAGATAGTG
AAAATGACTAAGCTTAGAAGGATTGAGCTCACAAATGTCAAAGAAGAACATATGAAGAAT
TTATGTTTGTCCATCGACAAACTTAAATTCCTTCACCATCTACTTGTGATGACAGTGGAT
GCAAATGCAATTCTTAAATTAGACGATCTCTCGAAGACTCCATCCATTTTCCGGAAGGTT
ATTTTAGCTGGAAGAATGTGCAAAGTTCCTCGTTGGTTTTCTTCGATGCTCAACGTTATG
CATTTGCATTTGCATTGGAGCCACTTCCCAAAAGATCAGGATCCTATCCCCTGCATCAGT
CAGCTTCCGTGTTTGGAGCATCTTGTGCTGGTTAATGCCTACGCCAGCCAGAAACAGCTG
CACTTTGAATCAGGATTCCAAAAGCTCGAGGACCTACACATTTCGTGTTTGCCAGAGTTG
GATGAAATGGTATTCCTGGAAGGAGTTATGCCAAAACTTGTGCGCCTGCATATACACGAT
TGTCCTAAACTGAAGGTGGTTCCTCAAGGACTTGACTATCTTACCAATTTGGAACAGATG
AATCTGAAAGCAGCTTCATTAGAACTCGTTGAGAATATCCGTGGCAAAGGAAGTAGCAAT
CGTTCAAAGGTTGGACGGATCCCATCCATCAAACATTACTATGAGGTAGATGGTCAGCAT
TCATGTGAAAGTCTATCCTACACATTGTATCCAACAGATTGGCGCGGAACCTTGCAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400032216
PEP Infomation

pacid=37469590 transcript=PGSC0003DMT400047579 locus=PGSC0003DMG400018490 ID=PGSC0003DMT400047579.v4.03 annot-version=v4.03
Sequence

MAESAVKILILSMEFVLDNPGYAIGGVRHEISKVKLELESIGSFIKDAEKCKNQNEGVCV
WVVQVRDVAFEAEDIIDEFLYHVDSMKKSGFRGRLAGVFYLPKILWLRYKTALELKRIRS
EIKDIAKRSKRYDLSHMEASSNAGSNSQSCCSCVQNIGESSLFIQNDEVIGIDKVKDSLL
SSLEGEEAHRVVISIAGMGGSGKTTLVAKAYTSLTVRKNFDCCAWVSVSQNNTIEDLLKK
LISEFFDEKEDLIPKNLKSMDYRQLVETLVKFLHKKRYIVVFDDVWNNNFWRQISVALPD
DKNRSRVIITTRNEDIAAYPYGPGGTHFRSKPLADDYAWMLFCNKAFSSQPNCKCPPELE
EIGRALVKKCEGLPLAIVALGGLMGSKDRSEMKWREVYDSLSWHISNNKLLDEVKTVMLL
SFNDLPYYLKNCFLYCCRFPMGKWIGAGRLIRMWMAEGFLEEKNSLNSEEVGKIYLKELI
SRNLLQVVKHQSFIRPKTCKLHDLMWELARSISEKENFLSICGEEVLEKDEKRARRLSVY
NVDGAVKMKGDLTHVRSFSMFNDKGESKFLLDDLLSRFRLLRVLELNDAKVDSLPNELGN
LFNLRYLSLGGTGIKELPTSVNRLRNLQTLDIRRTEVNVLPNGITELHNLRHLLAYGKEI
SAEHFAYVRGVQVPGKLWKMKNLQVLNCIQANADIARKIVKMTKLRRIELTNVKEEHMKN
LCLSIDKLKFLHHLLVMTVDANAILKLDDLSKTPSIFRKVILAGRMCKVPRWFSSMLNVM
HLHLHWSHFPKDQDPIPCISQLPCLEHLVLVNAYASQKQLHFESGFQKLEDLHISCLPEL
DEMVFLEGVMPKLVRLHIHDCPKLKVVPQGLDYLTNLEQMNLKAASLELVENIRGKGSSN
RSKVGRIPSIKHYYEVDGQHSCESLSYTLYPTDWRGTLQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400047579
Transcript Infomation

pacid=37469590 locus=PGSC0003DMG400018490 ID=PGSC0003DMT400047579.v4.03 annot-version=v4.03
Sequence

ATGGCTGAATCTGCAGTGAAAATCTTGATATTGAGCATGGAGTTTGTGCTTGACAATCCA
GGATATGCGATTGGAGGAGTTCGTCACGAGATCTCGAAGGTGAAACTTGAGCTAGAGAGC
ATAGGTTCATTTATAAAAGATGCTGAGAAGTGTAAAAACCAGAATGAAGGGGTGTGTGTT
TGGGTGGTACAAGTGAGGGACGTAGCGTTTGAAGCTGAAGATATCATTGATGAGTTCTTG
TATCATGTGGATAGCATGAAAAAGAGCGGTTTTAGAGGGCGTCTAGCTGGTGTGTTTTAC
CTTCCAAAGATACTGTGGTTGAGGTATAAAACTGCCCTGGAGTTGAAGAGAATCAGATCT
GAGATTAAAGACATTGCAAAACGAAGCAAGAGGTATGATCTAAGTCACATGGAAGCATCC
TCGAACGCTGGATCAAATTCACAAAGTTGTTGTAGTTGTGTGCAAAATATTGGAGAATCT
TCACTCTTCATACAGAACGACGAAGTTATAGGGATCGATAAAGTTAAAGACTCGTTGCTG
TCAAGTTTGGAGGGAGAGGAGGCTCACCGTGTTGTCATTTCTATCGCGGGCATGGGTGGT
TCAGGTAAGACAACTTTAGTCGCGAAAGCGTATACTAGCCTGACTGTGAGGAAGAATTTT
GATTGTTGTGCTTGGGTTTCCGTCTCACAAAACAACACGATTGAGGACCTGCTCAAAAAG
CTGATCTCAGAGTTTTTCGATGAAAAGGAAGATCTGATCCCGAAAAACTTGAAGTCAATG
GACTACAGGCAGTTGGTGGAGACTCTTGTGAAGTTCTTGCACAAAAAGAGGTATATTGTT
GTATTTGATGATGTATGGAACAATAATTTCTGGAGACAAATAAGTGTTGCTCTTCCTGAT
GATAAAAACCGGAGCAGGGTCATCATAACAACGCGAAATGAAGATATTGCAGCTTACCCT
TATGGTCCTGGTGGCACACATTTTCGTTCTAAACCTTTAGCTGATGACTACGCGTGGATG
CTATTTTGCAACAAGGCGTTTTCAAGTCAGCCTAATTGCAAGTGTCCTCCTGAACTGGAG
GAAATAGGCAGGGCATTGGTGAAAAAATGTGAAGGTCTACCATTAGCAATTGTTGCTCTT
GGAGGACTAATGGGGTCTAAAGATAGGTCGGAAATGAAATGGAGGGAAGTTTACGACAGC
TTAAGTTGGCATATCAGCAACAATAAGTTACTGGATGAGGTTAAAACTGTTATGTTGTTG
AGTTTCAATGATTTGCCTTACTATCTTAAGAACTGTTTTCTGTATTGTTGTCGTTTTCCG
ATGGGAAAATGGATAGGAGCAGGCAGACTCATTAGAATGTGGATGGCTGAAGGTTTTCTG
GAAGAAAAGAACAGCCTGAATTCGGAAGAAGTCGGGAAAATTTATCTCAAGGAACTGATT
TCTAGGAACTTACTCCAGGTTGTAAAGCATCAGAGTTTTATAAGACCGAAGACTTGCAAG
TTGCATGATCTGATGTGGGAGCTAGCTCGTTCGATCTCAGAGAAGGAGAATTTCTTGTCT
ATATGTGGTGAAGAAGTACTGGAGAAAGATGAGAAAAGAGCACGTAGATTGTCCGTGTAC
AATGTTGATGGAGCGGTTAAGATGAAAGGTGATTTGACACACGTTCGATCTTTCTCTATG
TTCAATGACAAAGGGGAATCCAAGTTTTTGTTGGATGATCTTTTATCCAGGTTTAGACTA
CTGAGGGTGTTGGAGTTGAACGATGCCAAAGTTGATTCGTTACCTAATGAACTAGGTAAC
TTGTTCAATCTAAGGTACTTAAGTCTGGGTGGTACAGGAATAAAAGAGCTTCCAACGTCT
GTGAATCGACTGAGAAACCTACAGACGTTAGATATTAGGCGAACAGAAGTGAATGTACTC
CCAAATGGAATCACCGAGCTGCATAATCTGCGACATCTTCTTGCCTATGGCAAAGAGATA
TCAGCAGAACATTTTGCATATGTTAGAGGGGTGCAAGTTCCGGGTAAGCTGTGGAAGATG
AAGAACTTACAAGTTCTTAATTGCATACAGGCAAATGCGGATATAGCACGTAAGATAGTG
AAAATGACTAAGCTTAGAAGGATTGAGCTCACAAATGTCAAAGAAGAACATATGAAGAAT
TTATGTTTGTCCATCGACAAACTTAAATTCCTTCACCATCTACTTGTGATGACAGTGGAT
GCAAATGCAATTCTTAAATTAGACGATCTCTCGAAGACTCCATCCATTTTCCGGAAGGTT
ATTTTAGCTGGAAGAATGTGCAAAGTTCCTCGTTGGTTTTCTTCGATGCTCAACGTTATG
CATTTGCATTTGCATTGGAGCCACTTCCCAAAAGATCAGGATCCTATCCCCTGCATCAGT
CAGCTTCCGTGTTTGGAGCATCTTGTGCTGGTTAATGCCTACGCCAGCCAGAAACAGCTG
CACTTTGAATCAGGATTCCAAAAGCTCGAGGACCTACACATTTCGTGTTTGCCAGAGTTG
GATGAAATGGTATTCCTGGAAGGAGTTATGCCAAAACTTGTGCGCCTGCATATACACGAT
TGTCCTAAACTGAAGGTGGTTCCTCAAGGACTTGACTATCTTACCAATTTGGAACAGATG
AATCTGAAAGCAGCTTCATTAGAACTCGTTGAGAATATCCGTGGCAAAGGAAGTAGCAAT
CGTTCAAAGGTTGGACGGATCCCATCCATCAAACATTACTATGAGGTAGATGGTCAGCAT
TCATGTGAAAGTCTATCCTACACATTGTATCCAACAGATTGGCGCGGAACCTTGCAATAA