Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047553
CDS Infomation

pacid=37470185 polypeptide=PGSC0003DMP400032200 locus=PGSC0003DMG400018481 ID=PGSC0003DMT400047553.v4.03 annot-version=v4.03
Sequence

ATGAATGCTTTCACATTTTCCTTCACTTATAAATTATTATTACCATACCCCAAAACTCTT
CTTTTTTCTCCTAATAGGAAATCTTCATATGCATCTCCACAAGCCATTCCAAAAAAATCA
TCATCTACACAACATAATAAACTTAAACCCCTAAAGAAATCCTTATTAGAGCCTTCATTT
CTAGAAGTTTTCTTGAATGCATGTGATGATTTCATCGACACGTACATCGATCCTCCACGT
CATCCTTTTATTGATCCAGAATGTGTTCTGTCTGACAACTTTGCTCCTGTTGACGAACTT
CCTCCAACAGAATGTGAGGTGGTAAAAGGCACCCTCCCACCGTGTCTCAACGGTGCTTAC
ATTAGAAATGGCCCAAACCCACAATATTTTCCTCGTGGACCTTTCCATTTCTTTGATGGC
GATGGAATGCTTCACTCTACTAAAATTTCTCAAGGCAAAGCAATATTTTGTAGTCGTTAT
GTCAAAACTTACAAATACTTGGTAGAGAAAAAAGCAGGATATTCAGTCATTCCTAATGTC
TTCTCCGACTTTAATAGCCTTATTGCCCTTGTGATTCGCGGAGCAATGTCTATAACTCGA
ATTATAATTGGTCAATTCGATCCAAGCAATGGTTTTGGCCCCGCAAATACTAGCTTGGCA
CTATTTGGTGGCAAATTATTTGCTCTTTATGAATCCGATATTCCTTATGCTATAAAATTG
GCCCCAAATGGTGATATCATAACTATTGGTAGTCACAATTTTGATGAAAATCTTTCTATA
AATATGACAGCCCATCCTAAAATTGATCCAAATACTAATGAGGTTTTTGCCTTTCGATAT
GATCCAATATTATTTCCATACTTAACTTATGTTCGAATTCACCCTAACGGGGTCAAAAGT
CATGACCTACCAATTTTCTCTATGACACGTCCATCATTCGTTCATGACTTTGCTATTACA
AAAAATTATGCCATATTTCCCGATATACAAATTGAAATGAACCTTTTAGGGCTCATCACC
GGTGGAGCACCGGTGGGTACCAACTCGAGAAAAGTACCTCGACTTGGGGTGATTCCTCGT
TACGCGATAGATGAGTCAGAAATGAGGTGGTTTGAAGTACCAGGGTTCAATATGATGCAT
GCAATAAATGCGTGGGAAGAAGATAATGGTGATACGATAGTAGTGACTGCTCCTAATATA
TTATCGATAGAACACTTTTTGAAAAGATTGGACCTAGTTCATGCAACAATTGAACAAGTA
AAAATCGACTTGAAGACGGGGAGGGTAAGTAGAAATCTAATGTCGAAGAGGAATCTTGAA
TTGGCATGTATCAACCGGGCTTATATTGGCAAGAAGAACAAGTACATATATGCAGCTATT
GCAGACCCTTTGCCAAAGGCAAAAGGTGTGGTAAAATTGGATGTATCCATGCTAGAAATT
GATCAACAACATGATTGCATAGTGGCCACAAGAATTTTTGGACCAAATTGTTTCTGTAGT
GAGCCCTTTTTTGTGCCAAAGGACCATGACAATGTATTTGCAGTTGACGAAGACGATGGC
TATGTGGTGTGTTATATGCATAATGAGAGCACAAGAGAATCAAGTTTCATGGTGATGGAT
GCCAAGACTCATGATCTTGAAATTGTGGCTGTTGTGAAATTGCCTCATCGTGTGCCTTAC
GGTTTTCATGGGATATTTGTGAAGGAAAGTGATCTTAACATGCTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400032200
PEP Infomation

pacid=37470185 transcript=PGSC0003DMT400047553 locus=PGSC0003DMG400018481 ID=PGSC0003DMT400047553.v4.03 annot-version=v4.03
Sequence

MNAFTFSFTYKLLLPYPKTLLFSPNRKSSYASPQAIPKKSSSTQHNKLKPLKKSLLEPSF
LEVFLNACDDFIDTYIDPPRHPFIDPECVLSDNFAPVDELPPTECEVVKGTLPPCLNGAY
IRNGPNPQYFPRGPFHFFDGDGMLHSTKISQGKAIFCSRYVKTYKYLVEKKAGYSVIPNV
FSDFNSLIALVIRGAMSITRIIIGQFDPSNGFGPANTSLALFGGKLFALYESDIPYAIKL
APNGDIITIGSHNFDENLSINMTAHPKIDPNTNEVFAFRYDPILFPYLTYVRIHPNGVKS
HDLPIFSMTRPSFVHDFAITKNYAIFPDIQIEMNLLGLITGGAPVGTNSRKVPRLGVIPR
YAIDESEMRWFEVPGFNMMHAINAWEEDNGDTIVVTAPNILSIEHFLKRLDLVHATIEQV
KIDLKTGRVSRNLMSKRNLELACINRAYIGKKNKYIYAAIADPLPKAKGVVKLDVSMLEI
DQQHDCIVATRIFGPNCFCSEPFFVPKDHDNVFAVDEDDGYVVCYMHNESTRESSFMVMD
AKTHDLEIVAVVKLPHRVPYGFHGIFVKESDLNML*

Transcript Sequence

Transcript ID

PGSC0003DMT400047553
Transcript Infomation

pacid=37470185 locus=PGSC0003DMG400018481 ID=PGSC0003DMT400047553.v4.03 annot-version=v4.03
Sequence

ATGAATGCTTTCACATTTTCCTTCACTTATAAATTATTATTACCATACCCCAAAACTCTT
CTTTTTTCTCCTAATAGGAAATCTTCATATGCATCTCCACAAGCCATTCCAAAAAAATCA
TCATCTACACAACATAATAAACTTAAACCCCTAAAGAAATCCTTATTAGAGCCTTCATTT
CTAGAAGTTTTCTTGAATGCATGTGATGATTTCATCGACACGTACATCGATCCTCCACGT
CATCCTTTTATTGATCCAGAATGTGTTCTGTCTGACAACTTTGCTCCTGTTGACGAACTT
CCTCCAACAGAATGTGAGGTGGTAAAAGGCACCCTCCCACCGTGTCTCAACGGTGCTTAC
ATTAGAAATGGCCCAAACCCACAATATTTTCCTCGTGGACCTTTCCATTTCTTTGATGGC
GATGGAATGCTTCACTCTACTAAAATTTCTCAAGGCAAAGCAATATTTTGTAGTCGTTAT
GTCAAAACTTACAAATACTTGGTAGAGAAAAAAGCAGGATATTCAGTCATTCCTAATGTC
TTCTCCGACTTTAATAGCCTTATTGCCCTTGTGATTCGCGGAGCAATGTCTATAACTCGA
ATTATAATTGGTCAATTCGATCCAAGCAATGGTTTTGGCCCCGCAAATACTAGCTTGGCA
CTATTTGGTGGCAAATTATTTGCTCTTTATGAATCCGATATTCCTTATGCTATAAAATTG
GCCCCAAATGGTGATATCATAACTATTGGTAGTCACAATTTTGATGAAAATCTTTCTATA
AATATGACAGCCCATCCTAAAATTGATCCAAATACTAATGAGGTTTTTGCCTTTCGATAT
GATCCAATATTATTTCCATACTTAACTTATGTTCGAATTCACCCTAACGGGGTCAAAAGT
CATGACCTACCAATTTTCTCTATGACACGTCCATCATTCGTTCATGACTTTGCTATTACA
AAAAATTATGCCATATTTCCCGATATACAAATTGAAATGAACCTTTTAGGGCTCATCACC
GGTGGAGCACCGGTGGGTACCAACTCGAGAAAAGTACCTCGACTTGGGGTGATTCCTCGT
TACGCGATAGATGAGTCAGAAATGAGGTGGTTTGAAGTACCAGGGTTCAATATGATGCAT
GCAATAAATGCGTGGGAAGAAGATAATGGTGATACGATAGTAGTGACTGCTCCTAATATA
TTATCGATAGAACACTTTTTGAAAAGATTGGACCTAGTTCATGCAACAATTGAACAAGTA
AAAATCGACTTGAAGACGGGGAGGGTAAGTAGAAATCTAATGTCGAAGAGGAATCTTGAA
TTGGCATGTATCAACCGGGCTTATATTGGCAAGAAGAACAAGTACATATATGCAGCTATT
GCAGACCCTTTGCCAAAGGCAAAAGGTGTGGTAAAATTGGATGTATCCATGCTAGAAATT
GATCAACAACATGATTGCATAGTGGCCACAAGAATTTTTGGACCAAATTGTTTCTGTAGT
GAGCCCTTTTTTGTGCCAAAGGACCATGACAATGTATTTGCAGTTGACGAAGACGATGGC
TATGTGGTGTGTTATATGCATAATGAGAGCACAAGAGAATCAAGTTTCATGGTGATGGAT
GCCAAGACTCATGATCTTGAAATTGTGGCTGTTGTGAAATTGCCTCATCGTGTGCCTTAC
GGTTTTCATGGGATATTTGTGAAGGAAAGTGATCTTAACATGCTATAG