Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047547
CDS Infomation

pacid=37471389 polypeptide=PGSC0003DMP400032198 locus=PGSC0003DMG400018479 ID=PGSC0003DMT400047547.v4.03 annot-version=v4.03
Sequence

ATGCATCTTCATTGTGTAGCACCAAACCCAGAAAAAGGTGGCACAGACTTGATGGAAGCT
TCGACGAATTCGCCTAATTCGTCGAAGCAATATGACAAGTCATGTCTGGGTTTCCCTGTC
CAGATCAAGTCACAACAATCTTTTTTACAGAAGGCCATGTACCCTATAACTTTGAAGTTT
GAAGAGATTGTTTACAAAATTAGTCAAGAAAACAAAGGAATGTGTTGTGGAGGACCATCA
AACACAAAAGAAAAGACTATACTAAATGGAGTGACAGGCACTGTGTATCCAGGAGAGATG
CTAGCTATGTTAGGTCCATCAGGTAGTGGCAAAACCACCCTCCTAACAGCACTAGGAGGG
CGTCTTTCGGGTAAATTATCCGGGAAGATTACGTACAACAGTCAGCCATTCTCGGGTTCA
ATCAAACGTAGAACAGGATTCGTGTCACAAGATGATGTCCTGTATCCTCATCTTACAGTA
ATTGAAACACTTCTGTTCACAGCTCTGCTTAGGCTGCCACAAAGCCTCGATAGGGTCGAA
AAAGTGAGACATGTAGAGCATGTTATTGCAGAACTTGGATTAAACAAGTGTAGAAACAGT
ATGATTGGAGGGTCATTGTTTAGAGGGATATCAGGTGGAGAGAAAAAAAGAGTTAGTATA
GGTCAAGAAATGCTGATCAACCCGAGTATACTACTTTTAGACGAGCCAACTTCAGGACTT
GATTCGACAACAGCACTCCGGATCCTTAACACTGTTAAACGACTAGCAAGTGGTGGTCGT
ACTGTGATCACAACGATCCATCAGCCGTCTAGTCGACTTTATCATATGTTTGATAAGGTA
GTGTTGCTCTCTGAGGGATGTCCTATCTACTATGGTCCTGCATCAACTGCCTTGGAATAC
TTCTCCTCTATTGGTTTTTCCATATCCATCACTATCAATCCAGCTGATCTCTTACTCGAT
CTCGCGAATGGTCTTTCAGGAATTGGACCGGAAACCAAGAATGCCAACGATCAAGGTGAT
AGTATTGAACAGGAAAAGAAGTTGGTGAGAGAAGCTCTCATCTCCGCGTATGAAAAGAAC
ATTTCAACAAGGTTGAAAACTGAAGTATGCAGTTTAGATAACAGTAGTTACAGCTACACA
AAGGATGTTTCTACAAGAAATGGTGTGAAATTAGAGCAATGGTGCACAAGTTGGATGCAT
CAATTCAAAATACTTCTTATGAGAGGGTTAAGGGAGCGAAGACACGAGAGCTTCAACAGG
CTTAGGATCTTTCAAGTTATAAGTGTAGCATTTCTTGCAGGACTATTGTGGTGGCATACT
CCAACATCCCACATTGAAGACCGAATTGCAATGTTGTTCTTTTTCGCGGTATTTTGGGGG
TTCTATCCACTCTACAACGCAGTTTTCACATTTCCACAGGAAAGAAGAATGCTCATCAAA
GAGAGATCATCAGGAATGTATCGTCTCTCGTCATATTTTCTTGCCAAAACTGTGGTAGAT
TTGCCTTTAGAACTAGCATTACCAACAGCATTTACGTTCATCCTTTACTGGATGGGAGGG
CTCAAACCTGATCCAACTACCTTCATCCTATCTCTCCTAGTAGTCCTCTACAACGTCCTC
GTTTCACAAAGCCTCGGACTAGCTTTTGGTGCCTTACTAATGGATGTTAAACAAGCCACT
ACATTAGCATCAGTAACAACATTAGTATTCCTAATTGCTGGAGGATACTACATTCAACAG
ATTCCTCCGTTCATCGTTTGGTTAAAATACTTGAGTTATAGTTACTATAGCTACAAGTTG
CTTCTAGGGGTTCAATACAATGACAATGACTACTATGAATGTTCAAAAGGAGTCTATTGC
CAAGTTGCAAACTTACCTGCCATTGAATCAGTAGGCTTAAACAATATGTGGATTGATGTC
TCGGTCATGGCTGTGATGTTGGTAGGCTACAGAGTTGTGGCTTATCTAGCACTCACTCGT
GTACGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400032198
PEP Infomation

pacid=37471389 transcript=PGSC0003DMT400047547 locus=PGSC0003DMG400018479 ID=PGSC0003DMT400047547.v4.03 annot-version=v4.03
Sequence

MHLHCVAPNPEKGGTDLMEASTNSPNSSKQYDKSCLGFPVQIKSQQSFLQKAMYPITLKF
EEIVYKISQENKGMCCGGPSNTKEKTILNGVTGTVYPGEMLAMLGPSGSGKTTLLTALGG
RLSGKLSGKITYNSQPFSGSIKRRTGFVSQDDVLYPHLTVIETLLFTALLRLPQSLDRVE
KVRHVEHVIAELGLNKCRNSMIGGSLFRGISGGEKKRVSIGQEMLINPSILLLDEPTSGL
DSTTALRILNTVKRLASGGRTVITTIHQPSSRLYHMFDKVVLLSEGCPIYYGPASTALEY
FSSIGFSISITINPADLLLDLANGLSGIGPETKNANDQGDSIEQEKKLVREALISAYEKN
ISTRLKTEVCSLDNSSYSYTKDVSTRNGVKLEQWCTSWMHQFKILLMRGLRERRHESFNR
LRIFQVISVAFLAGLLWWHTPTSHIEDRIAMLFFFAVFWGFYPLYNAVFTFPQERRMLIK
ERSSGMYRLSSYFLAKTVVDLPLELALPTAFTFILYWMGGLKPDPTTFILSLLVVLYNVL
VSQSLGLAFGALLMDVKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYSYKL
LLGVQYNDNDYYECSKGVYCQVANLPAIESVGLNNMWIDVSVMAVMLVGYRVVAYLALTR
VR*

Transcript Sequence

Transcript ID

PGSC0003DMT400047547
Transcript Infomation

pacid=37471389 locus=PGSC0003DMG400018479 ID=PGSC0003DMT400047547.v4.03 annot-version=v4.03
Sequence

ATGCATCTTCATTGTGTAGCACCAAACCCAGAAAAAGGTGGCACAGACTTGATGGAAGCT
TCGACGAATTCGCCTAATTCGTCGAAGCAATATGACAAGTCATGTCTGGGTTTCCCTGTC
CAGATCAAGTCACAACAATCTTTTTTACAGAAGGCCATGTACCCTATAACTTTGAAGTTT
GAAGAGATTGTTTACAAAATTAGTCAAGAAAACAAAGGAATGTGTTGTGGAGGACCATCA
AACACAAAAGAAAAGACTATACTAAATGGAGTGACAGGCACTGTGTATCCAGGAGAGATG
CTAGCTATGTTAGGTCCATCAGGTAGTGGCAAAACCACCCTCCTAACAGCACTAGGAGGG
CGTCTTTCGGGTAAATTATCCGGGAAGATTACGTACAACAGTCAGCCATTCTCGGGTTCA
ATCAAACGTAGAACAGGATTCGTGTCACAAGATGATGTCCTGTATCCTCATCTTACAGTA
ATTGAAACACTTCTGTTCACAGCTCTGCTTAGGCTGCCACAAAGCCTCGATAGGGTCGAA
AAAGTGAGACATGTAGAGCATGTTATTGCAGAACTTGGATTAAACAAGTGTAGAAACAGT
ATGATTGGAGGGTCATTGTTTAGAGGGATATCAGGTGGAGAGAAAAAAAGAGTTAGTATA
GGTCAAGAAATGCTGATCAACCCGAGTATACTACTTTTAGACGAGCCAACTTCAGGACTT
GATTCGACAACAGCACTCCGGATCCTTAACACTGTTAAACGACTAGCAAGTGGTGGTCGT
ACTGTGATCACAACGATCCATCAGCCGTCTAGTCGACTTTATCATATGTTTGATAAGGTA
GTGTTGCTCTCTGAGGGATGTCCTATCTACTATGGTCCTGCATCAACTGCCTTGGAATAC
TTCTCCTCTATTGGTTTTTCCATATCCATCACTATCAATCCAGCTGATCTCTTACTCGAT
CTCGCGAATGGTCTTTCAGGAATTGGACCGGAAACCAAGAATGCCAACGATCAAGGTGAT
AGTATTGAACAGGAAAAGAAGTTGGTGAGAGAAGCTCTCATCTCCGCGTATGAAAAGAAC
ATTTCAACAAGGTTGAAAACTGAAGTATGCAGTTTAGATAACAGTAGTTACAGCTACACA
AAGGATGTTTCTACAAGAAATGGTGTGAAATTAGAGCAATGGTGCACAAGTTGGATGCAT
CAATTCAAAATACTTCTTATGAGAGGGTTAAGGGAGCGAAGACACGAGAGCTTCAACAGG
CTTAGGATCTTTCAAGTTATAAGTGTAGCATTTCTTGCAGGACTATTGTGGTGGCATACT
CCAACATCCCACATTGAAGACCGAATTGCAATGTTGTTCTTTTTCGCGGTATTTTGGGGG
TTCTATCCACTCTACAACGCAGTTTTCACATTTCCACAGGAAAGAAGAATGCTCATCAAA
GAGAGATCATCAGGAATGTATCGTCTCTCGTCATATTTTCTTGCCAAAACTGTGGTAGAT
TTGCCTTTAGAACTAGCATTACCAACAGCATTTACGTTCATCCTTTACTGGATGGGAGGG
CTCAAACCTGATCCAACTACCTTCATCCTATCTCTCCTAGTAGTCCTCTACAACGTCCTC
GTTTCACAAAGCCTCGGACTAGCTTTTGGTGCCTTACTAATGGATGTTAAACAAGCCACT
ACATTAGCATCAGTAACAACATTAGTATTCCTAATTGCTGGAGGATACTACATTCAACAG
ATTCCTCCGTTCATCGTTTGGTTAAAATACTTGAGTTATAGTTACTATAGCTACAAGTTG
CTTCTAGGGGTTCAATACAATGACAATGACTACTATGAATGTTCAAAAGGAGTCTATTGC
CAAGTTGCAAACTTACCTGCCATTGAATCAGTAGGCTTAAACAATATGTGGATTGATGTC
TCGGTCATGGCTGTGATGTTGGTAGGCTACAGAGTTGTGGCTTATCTAGCACTCACTCGT
GTACGATGA