Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047538
CDS Infomation

pacid=37470733 polypeptide=PGSC0003DMP400032189 locus=PGSC0003DMG402018475 ID=PGSC0003DMT400047538.v4.03 annot-version=v4.03
Sequence

ATGATATCAAGTCCAGAGGCAGCTAAACAAGTTTTGGTCACAAGGGCTAATTTGTTTAAG
CCTACATTTCCTGCTAGCAAAGAAAGAATGTTAGGAAAACAAGCAATTTTCTTTCATCAA
GGTGATTACCATGCCAAATTGAGAAAATTAGTCCTCCAGGCTTTCAAGCCCGATTCGATC
AGAAACATCATCCCCGATATTGAATCCATCGCGATAACATCACTCGAATCATTCGAAGGA
AGATTGATCAACACTTATCAAGAAATGAAAACATATACATTCAATGTGGCATTGATTTCA
ATATTTGGCAAAGATGAATTTCTATATAGAGAGGAACTCAAGAAGTGTTACTACATTCTC
GAAAAAGGATACAATTCGATGCCAATTAATCTCCCCGGTACACTCTTCAACAAAGCAATG
AAAGCGAGGAAAGAACTAGCAAAAATTGTTGCCAAAATCATCTCTACTAGACGAGAAATG
AAGATTGATCATAGCGATTTACTCGGGTCATTCATGGGAGATAAAGAAGGACTCACTGAC
GAACAAATTGCAGATAATGTAATCGGAGTCATTTTTGCAGCTCGAGACACTACTGCTAGT
GTACTTACATGGATCCTCAAATACCTTGGAGAGAATCCTAGTGTCCTACAAGCTGTCACA
GAAGAGCAAGAGAACATAATGAGAACAAAAGAGGTGAATGATGAAGAAAAAGTTCTAAAT
TGGCAAGATACAAGACAAATGCCAATGACAACAAGAGTTATTCAAGAAACACTTAGAGTT
GCTTCAATTTTATCATTCACATTTAGAGAAGCTGTTGAAGATGTTGAATTTGAAGGATAT
TTAATACCTAAAGGATGGAAAGTATTACCACTCTTTAGGAATATTCATCATAGTCCAGAC
AATTTTCCTGAACCAGAGAAATTTGATCCTTCAAGATTTGAGGTGTCACCAAAACCCAAT
ACTTTCATGCCATTTGGCAATGGGGTTCACTCATGTCCAGGGAATGAATTAGCCAAGCTG
GAGATTTTGATCCTTGTACATCATCTGACCACAAAGTACAGGTGGTCTATGGTGGGCCCA
CAGAATGGAATTCAGTATGGGCCATTTGCTCTTCCCCAAAATGGGTTACCCATTAAACTC
TCTCTCAAAACATCATCAACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400032189
PEP Infomation

pacid=37470733 transcript=PGSC0003DMT400047538 locus=PGSC0003DMG402018475 ID=PGSC0003DMT400047538.v4.03 annot-version=v4.03
Sequence

MISSPEAAKQVLVTRANLFKPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLQAFKPDSI
RNIIPDIESIAITSLESFEGRLINTYQEMKTYTFNVALISIFGKDEFLYREELKKCYYIL
EKGYNSMPINLPGTLFNKAMKARKELAKIVAKIISTRREMKIDHSDLLGSFMGDKEGLTD
EQIADNVIGVIFAARDTTASVLTWILKYLGENPSVLQAVTEEQENIMRTKEVNDEEKVLN
WQDTRQMPMTTRVIQETLRVASILSFTFREAVEDVEFEGYLIPKGWKVLPLFRNIHHSPD
NFPEPEKFDPSRFEVSPKPNTFMPFGNGVHSCPGNELAKLEILILVHHLTTKYRWSMVGP
QNGIQYGPFALPQNGLPIKLSLKTSST*

Transcript Sequence

Transcript ID

PGSC0003DMT400047538
Transcript Infomation

pacid=37470733 locus=PGSC0003DMG402018475 ID=PGSC0003DMT400047538.v4.03 annot-version=v4.03
Sequence

ATGATATCAAGTCCAGAGGCAGCTAAACAAGTTTTGGTCACAAGGGCTAATTTGTTTAAG
CCTACATTTCCTGCTAGCAAAGAAAGAATGTTAGGAAAACAAGCAATTTTCTTTCATCAA
GGTGATTACCATGCCAAATTGAGAAAATTAGTCCTCCAGGCTTTCAAGCCCGATTCGATC
AGAAACATCATCCCCGATATTGAATCCATCGCGATAACATCACTCGAATCATTCGAAGGA
AGATTGATCAACACTTATCAAGAAATGAAAACATATACATTCAATGTGGCATTGATTTCA
ATATTTGGCAAAGATGAATTTCTATATAGAGAGGAACTCAAGAAGTGTTACTACATTCTC
GAAAAAGGATACAATTCGATGCCAATTAATCTCCCCGGTACACTCTTCAACAAAGCAATG
AAAGCGAGGAAAGAACTAGCAAAAATTGTTGCCAAAATCATCTCTACTAGACGAGAAATG
AAGATTGATCATAGCGATTTACTCGGGTCATTCATGGGAGATAAAGAAGGACTCACTGAC
GAACAAATTGCAGATAATGTAATCGGAGTCATTTTTGCAGCTCGAGACACTACTGCTAGT
GTACTTACATGGATCCTCAAATACCTTGGAGAGAATCCTAGTGTCCTACAAGCTGTCACA
GAAGAGCAAGAGAACATAATGAGAACAAAAGAGGTGAATGATGAAGAAAAAGTTCTAAAT
TGGCAAGATACAAGACAAATGCCAATGACAACAAGAGTTATTCAAGAAACACTTAGAGTT
GCTTCAATTTTATCATTCACATTTAGAGAAGCTGTTGAAGATGTTGAATTTGAAGGATAT
TTAATACCTAAAGGATGGAAAGTATTACCACTCTTTAGGAATATTCATCATAGTCCAGAC
AATTTTCCTGAACCAGAGAAATTTGATCCTTCAAGATTTGAGGTGTCACCAAAACCCAAT
ACTTTCATGCCATTTGGCAATGGGGTTCACTCATGTCCAGGGAATGAATTAGCCAAGCTG
GAGATTTTGATCCTTGTACATCATCTGACCACAAAGTACAGGTGGTCTATGGTGGGCCCA
CAGAATGGAATTCAGTATGGGCCATTTGCTCTTCCCCAAAATGGGTTACCCATTAAACTC
TCTCTCAAAACATCATCAACATAA