Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047515
CDS Infomation

pacid=37468856 polypeptide=PGSC0003DMP400032170 locus=PGSC0003DMG400018465 ID=PGSC0003DMT400047515.v4.03 annot-version=v4.03
Sequence

ATGAAGCACAAAGATGGAAAACCACATCAATCGGATAAAAGTTCATGGAAAGTCCCAGTG
GCATTAACAGTTGTGGTGCTGTGTGGGCTTTCTTTCTACCTTGGAGGTATTTTTTGCTCT
GAAAGGGAGAGATATGTAGCTGAGGCTGTTAACAAGGCTGTTAACACTCCCACGGGAACT
GCTACTGTACCTGGCCAGATCAAAGCCGTTTCGTTTCCTGAATGCAGTGCTGAGTATCAG
GACTATACTCCATGCACAGATCCAAAGAGATGGCACAAGTATGGTCGCCATCGTCTTGCT
TTCTTGGAACGGCATTGCCCTCCTAGTTTTGAAAGACAGGAATGCTTGGTACCCCCACCA
GATGGCTATAAATCGCCTATTAGATGGCCAAAGAGCAAAAATGAGTGTTGGTACAGGAAT
GTTCCATATGATTGGATTAACAAACAAAAGTCCAATCAACATTGGCTTAAAAAAGAAGGG
GAGAAGTTTCTCTTTCCTGGTGGTGGTACAATGTTTCCTAATGGAGTTGGTGCCTATGTT
GATTTGATGCAAGATTTGATTCCGCAAATGAAAGATGGGACAATCCGAACTGCCATTGAT
ACTGGATGTGGGGTAGCAAGCTGGGGAGGTGATTTACTGGATCGTGGAATTTTGACGGTC
TCTCTTGCCCCAAGGGACAATCACCAGGCTCAGGTTCAGTTTGCTCTGGAACGTGGAATT
CCTGCAATTCTGGGCATCATTTCTACTCAGCGTCTTCCTTTCCCTTCAAACTCTTTTGAT
ATGGCTCATTGTTCAAGATGCCTAATTCCATGGACCGAGTTCGGTGGAGTTTACCTTCTT
GAGGTACATCGCATACTCCGACCTGGCGGTTTTTGGGTCCTCTCTGGTCCTCCAGTGAAC
TATCAACGTCGTTGGAGAGGATGGAATACCACTATTGAGGAGCAAAAATCAGATTACGAT
AAGTTGCAAGAACTACTAACTTCAATGTGCTTCAAATTATTCAATAAGAAGGACGACATT
GCTGTGTGGCAGAAGTTGTCTGACAATAGCTGCTATAAGAAGCTTGATAATCCTGAAAAC
TATCCATCAAAATGTGATGATGGTACTGAACCTGATTCAGCGTGGTACACCCCTCTTCGT
CCTTGTGTAGTTGTGCCAAATCCAGCTGCTAAGAAAGTCAAGTTGGAGGCCCTCCCCAAG
TGGCCAGAAAGATTGCACGCTGCTCCTGAACGCGTTTCTGATGTTCGTGGAGGTAATGCG
GGTTCCTTCAAGCATGATGATGGTAAATGGAAGGCTCGGGCGAAACACTACAAGAAGTTG
CTCCCTGCACTTGGGACTGACAAGATCAGAAATGTAATGGACATGAACACCTTGTATGGA
GGTTTCGCTGCTGCTGTGGTCGATGATCCGTTGTGGGTCATGAATGTGGTTTCATCTTAT
GCACCGAATACACTTTCTGTGGTCTACGATAGGGGTCTTATTGGAACAATTCATGACTGG
TGTGAGGCTTTCTCAACATACCCTCGGACATACGATCTTCTGCATCTTGATGGCCTCTTC
TCTGCCGAAAGTCACAGATGTGAAATGAAATATGTTCTGCTGGAAATGGATCGTATTTTA
CGGCCCAATGGATATGCTATAATCCGAGAATCCAGCTATTTCGTAGACGCTATAGCTACT
ATGGTTAAGGGAATGAGATGGAGCTGTCGTAAGGAAGAAACGGAATACGGCGTAGAGAAG
GAGAAGATATTGATTTGCCAGAAGAAGTTATGGTATTCAAAGCAAAATTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400032170
PEP Infomation

pacid=37468856 transcript=PGSC0003DMT400047515 locus=PGSC0003DMG400018465 ID=PGSC0003DMT400047515.v4.03 annot-version=v4.03
Sequence

MKHKDGKPHQSDKSSWKVPVALTVVVLCGLSFYLGGIFCSERERYVAEAVNKAVNTPTGT
ATVPGQIKAVSFPECSAEYQDYTPCTDPKRWHKYGRHRLAFLERHCPPSFERQECLVPPP
DGYKSPIRWPKSKNECWYRNVPYDWINKQKSNQHWLKKEGEKFLFPGGGTMFPNGVGAYV
DLMQDLIPQMKDGTIRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHQAQVQFALERGI
PAILGIISTQRLPFPSNSFDMAHCSRCLIPWTEFGGVYLLEVHRILRPGGFWVLSGPPVN
YQRRWRGWNTTIEEQKSDYDKLQELLTSMCFKLFNKKDDIAVWQKLSDNSCYKKLDNPEN
YPSKCDDGTEPDSAWYTPLRPCVVVPNPAAKKVKLEALPKWPERLHAAPERVSDVRGGNA
GSFKHDDGKWKARAKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVVDDPLWVMNVVSSY
APNTLSVVYDRGLIGTIHDWCEAFSTYPRTYDLLHLDGLFSAESHRCEMKYVLLEMDRIL
RPNGYAIIRESSYFVDAIATMVKGMRWSCRKEETEYGVEKEKILICQKKLWYSKQNS*

Transcript Sequence

Transcript ID

PGSC0003DMT400047515
Transcript Infomation

pacid=37468856 locus=PGSC0003DMG400018465 ID=PGSC0003DMT400047515.v4.03 annot-version=v4.03
Sequence

ATGAAGCACAAAGATGGAAAACCACATCAATCGGATAAAAGTTCATGGAAAGTCCCAGTG
GCATTAACAGTTGTGGTGCTGTGTGGGCTTTCTTTCTACCTTGGAGGTATTTTTTGCTCT
GAAAGGGAGAGATATGTAGCTGAGGCTGTTAACAAGGCTGTTAACACTCCCACGGGAACT
GCTACTGTACCTGGCCAGATCAAAGCCGTTTCGTTTCCTGAATGCAGTGCTGAGTATCAG
GACTATACTCCATGCACAGATCCAAAGAGATGGCACAAGTATGGTCGCCATCGTCTTGCT
TTCTTGGAACGGCATTGCCCTCCTAGTTTTGAAAGACAGGAATGCTTGGTACCCCCACCA
GATGGCTATAAATCGCCTATTAGATGGCCAAAGAGCAAAAATGAGTGTTGGTACAGGAAT
GTTCCATATGATTGGATTAACAAACAAAAGTCCAATCAACATTGGCTTAAAAAAGAAGGG
GAGAAGTTTCTCTTTCCTGGTGGTGGTACAATGTTTCCTAATGGAGTTGGTGCCTATGTT
GATTTGATGCAAGATTTGATTCCGCAAATGAAAGATGGGACAATCCGAACTGCCATTGAT
ACTGGATGTGGGGTAGCAAGCTGGGGAGGTGATTTACTGGATCGTGGAATTTTGACGGTC
TCTCTTGCCCCAAGGGACAATCACCAGGCTCAGGTTCAGTTTGCTCTGGAACGTGGAATT
CCTGCAATTCTGGGCATCATTTCTACTCAGCGTCTTCCTTTCCCTTCAAACTCTTTTGAT
ATGGCTCATTGTTCAAGATGCCTAATTCCATGGACCGAGTTCGGTGGAGTTTACCTTCTT
GAGGTACATCGCATACTCCGACCTGGCGGTTTTTGGGTCCTCTCTGGTCCTCCAGTGAAC
TATCAACGTCGTTGGAGAGGATGGAATACCACTATTGAGGAGCAAAAATCAGATTACGAT
AAGTTGCAAGAACTACTAACTTCAATGTGCTTCAAATTATTCAATAAGAAGGACGACATT
GCTGTGTGGCAGAAGTTGTCTGACAATAGCTGCTATAAGAAGCTTGATAATCCTGAAAAC
TATCCATCAAAATGTGATGATGGTACTGAACCTGATTCAGCGTGGTACACCCCTCTTCGT
CCTTGTGTAGTTGTGCCAAATCCAGCTGCTAAGAAAGTCAAGTTGGAGGCCCTCCCCAAG
TGGCCAGAAAGATTGCACGCTGCTCCTGAACGCGTTTCTGATGTTCGTGGAGGTAATGCG
GGTTCCTTCAAGCATGATGATGGTAAATGGAAGGCTCGGGCGAAACACTACAAGAAGTTG
CTCCCTGCACTTGGGACTGACAAGATCAGAAATGTAATGGACATGAACACCTTGTATGGA
GGTTTCGCTGCTGCTGTGGTCGATGATCCGTTGTGGGTCATGAATGTGGTTTCATCTTAT
GCACCGAATACACTTTCTGTGGTCTACGATAGGGGTCTTATTGGAACAATTCATGACTGG
TGTGAGGCTTTCTCAACATACCCTCGGACATACGATCTTCTGCATCTTGATGGCCTCTTC
TCTGCCGAAAGTCACAGATGTGAAATGAAATATGTTCTGCTGGAAATGGATCGTATTTTA
CGGCCCAATGGATATGCTATAATCCGAGAATCCAGCTATTTCGTAGACGCTATAGCTACT
ATGGTTAAGGGAATGAGATGGAGCTGTCGTAAGGAAGAAACGGAATACGGCGTAGAGAAG
GAGAAGATATTGATTTGCCAGAAGAAGTTATGGTATTCAAAGCAAAATTCATGA