Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047499
CDS Infomation

pacid=37469987 polypeptide=PGSC0003DMP400032156 locus=PGSC0003DMG400018461 ID=PGSC0003DMT400047499.v4.03 annot-version=v4.03
Sequence

ATGGCATCATTTAGTAATTCACAATACTGTCCTCCACGGAAGTATGAGGTCTTTCTAAGT
TTTAGAGGTGAAGATACTCGTAGAACATTTACGAGTCACTTGTATGAAGGTTTGAAAAAT
AGGGGAATATTCACTTTTCAAGACGTGAAAAGGCTAGATCATGGCGATTCGATTCCAGAA
GAACTCGTGAAAGCTATCAAAGAGTCTCAAATTTCCCTTGTTGTTTTCTCGAAAAATTAT
GGTGCATCGAGGTGGTGCTTGAATGAACTAGTGAAGATCATGGAATGTAAGGACAAAAAT
GAACAAACTGTTATACCGGTTTTCTATGATGTGGATCCATCACATGTTCGAAACCAAAGG
GAGAGCTTTGGAGAAGCATTTTCCAAACATGAATCGAAGTATAAGGATGATATCGAGGGA
ATGCAGAAAGTGCAAAGATGGAGGACTGCCTTAACTGTTGCGGCAAATCTAAAAGGATAT
GATATCCGTGACGGGATTGAATCAGAGAAGATTCAACAGATTGTGGACCACATTTCTACC
AAATTATGCAAGAGTGTGTATTCTTTATCTTCTTTGCAAGATGTTGTGGGAATAAATGCT
CATTTAGAGAAACTAAAATCCCGGCTTCAGATAGAAATCAACGATGTTCGGATTGTAGGG
ATTTGGGGAACAGGAGGAGTCGGTAAAACAACAATAGCAAAAGCCATCTTTGATACCTTA
TCTTATCAATTTAAAGCTGCTTGTTTTCTTGCAGATGTTAAAGAAAATGCAAAAAAGAAT
CAAATGCATTCTTTACAAAATATCCTTCTATCTGAACTGTTAAGAAAAAAAGATGATTAC
GTTAATAATAAGTACGAAGGGAAGAGCATAATTCCGAGCAGACTTTGTTCAATGAAGGTT
CTAATTGTGCTTGATGACATAGATCATAGTGATCATTTGGAGTATTTAGCAGGTGATCTT
CGTTGGTTTGGTAATGGGAGCAGAGTTGTTGTAACAACTAGAAATAGACATTTGATAGAG
AAGGATGATGCAATATATGAAGTGCCTACATTACCTGATCATGAAGCTATGCTATTGTTC
AATCAACATGCTTTCAAAAAAGAAGTTCCAGATGAGCGTTTTAAGAAGTTCTCGTTGGAG
TTAGTAAATAATGCTAAAGGTCTTCCTTTAGCCCTCAAGGTGTGGGGTTCGTTGTTGCAT
AAGAAAGGCCTAACTCAGTGGGGAAGAACTGTAGACCAAATAAAGAATAACTCGATTTCA
GAAATTGTTGAAAAACTCAAAATAAGTTATGATGGACTGGAGCCCGAAGAGCAAAAGATA
TTTCTAGATATGGCATGTTTCTTCCGAGGATATGAAAAAAAAGAAGTCATTCAAATTCTT
GGAAGTTGTGATTTTGGTGTTGAATACGGATTGGAAGTCCTAATCGACAAATCTCTTGTT
TTCATCTCCAAAAATGATACGATTGAAATGCATGACTTGATTCAAGATATGGGTAGATAT
GTGGTGAAAATGCAAAAAGATTCGGGAGAACAGAGCAGACTATGGGCCGCTGAAGATTTC
GAAGAAGTGATCGTCAACAATACAGGGACAAAAGCAGTGGAAGCAATCTGGCTACATTAT
ATTCAAAATCTATGCTTTAGCAAAAAAGCCATGAAAAAGATGAAAAAGCTTAGAGTACTA
TACATCGGTCGTTTTCATACACATGATGACACAATTGAGTACCTGCCCAACAACTTGCGT
TGGTTTGAGTGTATTTGGTATCCTTGGAAATCATTGCCAGAAAATTTTGAACCCAAAAGA
CTTGTTCATCTTGATCTCCAGTACAGTTTGCTGCGTTCTTTATGGATTGGCACAAAGCAT
TTTCCGTCTCTACGAAGGATAAATCTCAGCTTCTCTAGAAGCCTGATACGAACACCAGTT
TTCACGGGGATGCCAAATCTGGAGTATTTGAATTTGGAGGGATGTAGTAATCTTGAAGAG
GTTCACCATTCCTTGGGATGTTCCAAGAAACTCATCGAGTTAAATTTGAGTTGGTGTGTT
AGCCTTAAGAGGTTTCCATATGTTAACGTGGAATCTCTTGAATCTCTGAATCTACAACAT
TGCTCTAGTTTAGAGAAGTTCCCTGAAATCCTCGGAAGAATCAAGCCATTGGAGTTAGAT
ATTCAAATGAGAAAAAATGTGATAGGGGAACTACCATCATCTGTTTTTCAGCACCAAGCA
CGTCTTACGGAGCTAGATTTGAGCTTTTTGATCAACATTATAGCTCTTCCAAGCAGCATT
GGCATGTTGAAAGGTTTGGTGAAGCTACATGTGCGGTACTGCTCAAAACTTGAAATCTTG
CCAGAAGAGATAGGTGATTTAGAAAACTTGGAGAAGCTTGATGCCAGCTATAGTAGGCTA
ATCTCGCAGCCTCCGGCTTCCATCGTCCGCTTGAAAAAGCTTAAATTCTTGAGTTTTGAG
AAAGGAAATACAAAAGTAGGCCATAAAGATGGAGTGTGCTTTGTGTTCCCACATGTGAAT
GAAGGGTTATGCTCATTGGAATATCTGAATCTCAATTACTGCAATCTAATAGATGGAGGA
CTTCCGGAAGACATTGGATGTTTATCCTCTTTAAAAGAGTTGTATCTCTGGGGAAATAAT
TTTGAGCATTTGCCTCGAAGCATGGCCCAACTTGGCGCTCTTAAATTCTTGAATTTATCA
CACTGCAAGAAGCTTAAAGAGTTGCCAAGTTTCACGGGGATGCCAAACTTGGAGACTTTG
AATCTGATAAAATGTATGAATCTTGAAGAGGTTCATCATTCCCTGGGATTTCTCAAAAAG
CTCTGTGGATTAACATTGACGAATTGTATACAACTTAAGAGGTTTCCAGGTCTGTGCATT
GATTCTCTTAAGTATCTGTGTCTACGGGATTGCTCTAGTTTAGAAAAATTTCCAGATATC
TTCGGAAGCATGAAACTGAAGTCGGATATTCACATGCTAGACAGTGTGATGAGGGATCTA
AATTCGATGTATAATTCATTTCCACGTTCCTTGTCTCAGGATATCGTTTCCTTGCAGCAA
GGCATGATCTGTGCTTCAGATTCCTTGTCACTAAGAGTGTTTACCGTTGTGCATTGTGGG
AATAAGATCCCAAGTTGGTTCCACCATCGGGGAACTGGTAAAACTGTATCAGTCAATTTG
CCTGAAAATTGGTATGTACGTGATGACTTGTTGGGATTTGCTGTATGTTACTCTGGCAAC
CTAATTGACACCACAGCTCACTTGATTCCCTTACGTGATGATGGGATGCCGTGGATGACT
CAAAAACTAGAATTATCCTCTCTTCCAAATTATGATACAGGATGTACTATTCATTTTTTC
TTGGTACCTCTTGCTAGCTTATGGGATACATCTACGGCAAATGGTAATACACCAAATGAC
TATGGGCTTATTACGTTTTCTTTCTCCGGAGGAATGGAGGAGTATGGATTTCGTTTGTTG
TATAAAGATGAACTCCAGGGAAAATACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032156
PEP Infomation

pacid=37469987 transcript=PGSC0003DMT400047499 locus=PGSC0003DMG400018461 ID=PGSC0003DMT400047499.v4.03 annot-version=v4.03
Sequence

MASFSNSQYCPPRKYEVFLSFRGEDTRRTFTSHLYEGLKNRGIFTFQDVKRLDHGDSIPE
ELVKAIKESQISLVVFSKNYGASRWCLNELVKIMECKDKNEQTVIPVFYDVDPSHVRNQR
ESFGEAFSKHESKYKDDIEGMQKVQRWRTALTVAANLKGYDIRDGIESEKIQQIVDHIST
KLCKSVYSLSSLQDVVGINAHLEKLKSRLQIEINDVRIVGIWGTGGVGKTTIAKAIFDTL
SYQFKAACFLADVKENAKKNQMHSLQNILLSELLRKKDDYVNNKYEGKSIIPSRLCSMKV
LIVLDDIDHSDHLEYLAGDLRWFGNGSRVVVTTRNRHLIEKDDAIYEVPTLPDHEAMLLF
NQHAFKKEVPDERFKKFSLELVNNAKGLPLALKVWGSLLHKKGLTQWGRTVDQIKNNSIS
EIVEKLKISYDGLEPEEQKIFLDMACFFRGYEKKEVIQILGSCDFGVEYGLEVLIDKSLV
FISKNDTIEMHDLIQDMGRYVVKMQKDSGEQSRLWAAEDFEEVIVNNTGTKAVEAIWLHY
IQNLCFSKKAMKKMKKLRVLYIGRFHTHDDTIEYLPNNLRWFECIWYPWKSLPENFEPKR
LVHLDLQYSLLRSLWIGTKHFPSLRRINLSFSRSLIRTPVFTGMPNLEYLNLEGCSNLEE
VHHSLGCSKKLIELNLSWCVSLKRFPYVNVESLESLNLQHCSSLEKFPEILGRIKPLELD
IQMRKNVIGELPSSVFQHQARLTELDLSFLINIIALPSSIGMLKGLVKLHVRYCSKLEIL
PEEIGDLENLEKLDASYSRLISQPPASIVRLKKLKFLSFEKGNTKVGHKDGVCFVFPHVN
EGLCSLEYLNLNYCNLIDGGLPEDIGCLSSLKELYLWGNNFEHLPRSMAQLGALKFLNLS
HCKKLKELPSFTGMPNLETLNLIKCMNLEEVHHSLGFLKKLCGLTLTNCIQLKRFPGLCI
DSLKYLCLRDCSSLEKFPDIFGSMKLKSDIHMLDSVMRDLNSMYNSFPRSLSQDIVSLQQ
GMICASDSLSLRVFTVVHCGNKIPSWFHHRGTGKTVSVNLPENWYVRDDLLGFAVCYSGN
LIDTTAHLIPLRDDGMPWMTQKLELSSLPNYDTGCTIHFFLVPLASLWDTSTANGNTPND
YGLITFSFSGGMEEYGFRLLYKDELQGKY*

Transcript Sequence

Transcript ID

PGSC0003DMT400047499
Transcript Infomation

pacid=37469987 locus=PGSC0003DMG400018461 ID=PGSC0003DMT400047499.v4.03 annot-version=v4.03
Sequence

ATGGCATCATTTAGTAATTCACAATACTGTCCTCCACGGAAGTATGAGGTCTTTCTAAGT
TTTAGAGGTGAAGATACTCGTAGAACATTTACGAGTCACTTGTATGAAGGTTTGAAAAAT
AGGGGAATATTCACTTTTCAAGACGTGAAAAGGCTAGATCATGGCGATTCGATTCCAGAA
GAACTCGTGAAAGCTATCAAAGAGTCTCAAATTTCCCTTGTTGTTTTCTCGAAAAATTAT
GGTGCATCGAGGTGGTGCTTGAATGAACTAGTGAAGATCATGGAATGTAAGGACAAAAAT
GAACAAACTGTTATACCGGTTTTCTATGATGTGGATCCATCACATGTTCGAAACCAAAGG
GAGAGCTTTGGAGAAGCATTTTCCAAACATGAATCGAAGTATAAGGATGATATCGAGGGA
ATGCAGAAAGTGCAAAGATGGAGGACTGCCTTAACTGTTGCGGCAAATCTAAAAGGATAT
GATATCCGTGACGGGATTGAATCAGAGAAGATTCAACAGATTGTGGACCACATTTCTACC
AAATTATGCAAGAGTGTGTATTCTTTATCTTCTTTGCAAGATGTTGTGGGAATAAATGCT
CATTTAGAGAAACTAAAATCCCGGCTTCAGATAGAAATCAACGATGTTCGGATTGTAGGG
ATTTGGGGAACAGGAGGAGTCGGTAAAACAACAATAGCAAAAGCCATCTTTGATACCTTA
TCTTATCAATTTAAAGCTGCTTGTTTTCTTGCAGATGTTAAAGAAAATGCAAAAAAGAAT
CAAATGCATTCTTTACAAAATATCCTTCTATCTGAACTGTTAAGAAAAAAAGATGATTAC
GTTAATAATAAGTACGAAGGGAAGAGCATAATTCCGAGCAGACTTTGTTCAATGAAGGTT
CTAATTGTGCTTGATGACATAGATCATAGTGATCATTTGGAGTATTTAGCAGGTGATCTT
CGTTGGTTTGGTAATGGGAGCAGAGTTGTTGTAACAACTAGAAATAGACATTTGATAGAG
AAGGATGATGCAATATATGAAGTGCCTACATTACCTGATCATGAAGCTATGCTATTGTTC
AATCAACATGCTTTCAAAAAAGAAGTTCCAGATGAGCGTTTTAAGAAGTTCTCGTTGGAG
TTAGTAAATAATGCTAAAGGTCTTCCTTTAGCCCTCAAGGTGTGGGGTTCGTTGTTGCAT
AAGAAAGGCCTAACTCAGTGGGGAAGAACTGTAGACCAAATAAAGAATAACTCGATTTCA
GAAATTGTTGAAAAACTCAAAATAAGTTATGATGGACTGGAGCCCGAAGAGCAAAAGATA
TTTCTAGATATGGCATGTTTCTTCCGAGGATATGAAAAAAAAGAAGTCATTCAAATTCTT
GGAAGTTGTGATTTTGGTGTTGAATACGGATTGGAAGTCCTAATCGACAAATCTCTTGTT
TTCATCTCCAAAAATGATACGATTGAAATGCATGACTTGATTCAAGATATGGGTAGATAT
GTGGTGAAAATGCAAAAAGATTCGGGAGAACAGAGCAGACTATGGGCCGCTGAAGATTTC
GAAGAAGTGATCGTCAACAATACAGGGACAAAAGCAGTGGAAGCAATCTGGCTACATTAT
ATTCAAAATCTATGCTTTAGCAAAAAAGCCATGAAAAAGATGAAAAAGCTTAGAGTACTA
TACATCGGTCGTTTTCATACACATGATGACACAATTGAGTACCTGCCCAACAACTTGCGT
TGGTTTGAGTGTATTTGGTATCCTTGGAAATCATTGCCAGAAAATTTTGAACCCAAAAGA
CTTGTTCATCTTGATCTCCAGTACAGTTTGCTGCGTTCTTTATGGATTGGCACAAAGCAT
TTTCCGTCTCTACGAAGGATAAATCTCAGCTTCTCTAGAAGCCTGATACGAACACCAGTT
TTCACGGGGATGCCAAATCTGGAGTATTTGAATTTGGAGGGATGTAGTAATCTTGAAGAG
GTTCACCATTCCTTGGGATGTTCCAAGAAACTCATCGAGTTAAATTTGAGTTGGTGTGTT
AGCCTTAAGAGGTTTCCATATGTTAACGTGGAATCTCTTGAATCTCTGAATCTACAACAT
TGCTCTAGTTTAGAGAAGTTCCCTGAAATCCTCGGAAGAATCAAGCCATTGGAGTTAGAT
ATTCAAATGAGAAAAAATGTGATAGGGGAACTACCATCATCTGTTTTTCAGCACCAAGCA
CGTCTTACGGAGCTAGATTTGAGCTTTTTGATCAACATTATAGCTCTTCCAAGCAGCATT
GGCATGTTGAAAGGTTTGGTGAAGCTACATGTGCGGTACTGCTCAAAACTTGAAATCTTG
CCAGAAGAGATAGGTGATTTAGAAAACTTGGAGAAGCTTGATGCCAGCTATAGTAGGCTA
ATCTCGCAGCCTCCGGCTTCCATCGTCCGCTTGAAAAAGCTTAAATTCTTGAGTTTTGAG
AAAGGAAATACAAAAGTAGGCCATAAAGATGGAGTGTGCTTTGTGTTCCCACATGTGAAT
GAAGGGTTATGCTCATTGGAATATCTGAATCTCAATTACTGCAATCTAATAGATGGAGGA
CTTCCGGAAGACATTGGATGTTTATCCTCTTTAAAAGAGTTGTATCTCTGGGGAAATAAT
TTTGAGCATTTGCCTCGAAGCATGGCCCAACTTGGCGCTCTTAAATTCTTGAATTTATCA
CACTGCAAGAAGCTTAAAGAGTTGCCAAGTTTCACGGGGATGCCAAACTTGGAGACTTTG
AATCTGATAAAATGTATGAATCTTGAAGAGGTTCATCATTCCCTGGGATTTCTCAAAAAG
CTCTGTGGATTAACATTGACGAATTGTATACAACTTAAGAGGTTTCCAGGTCTGTGCATT
GATTCTCTTAAGTATCTGTGTCTACGGGATTGCTCTAGTTTAGAAAAATTTCCAGATATC
TTCGGAAGCATGAAACTGAAGTCGGATATTCACATGCTAGACAGTGTGATGAGGGATCTA
AATTCGATGTATAATTCATTTCCACGTTCCTTGTCTCAGGATATCGTTTCCTTGCAGCAA
GGCATGATCTGTGCTTCAGATTCCTTGTCACTAAGAGTGTTTACCGTTGTGCATTGTGGG
AATAAGATCCCAAGTTGGTTCCACCATCGGGGAACTGGTAAAACTGTATCAGTCAATTTG
CCTGAAAATTGGTATGTACGTGATGACTTGTTGGGATTTGCTGTATGTTACTCTGGCAAC
CTAATTGACACCACAGCTCACTTGATTCCCTTACGTGATGATGGGATGCCGTGGATGACT
CAAAAACTAGAATTATCCTCTCTTCCAAATTATGATACAGGATGTACTATTCATTTTTTC
TTGGTACCTCTTGCTAGCTTATGGGATACATCTACGGCAAATGGTAATACACCAAATGAC
TATGGGCTTATTACGTTTTCTTTCTCCGGAGGAATGGAGGAGTATGGATTTCGTTTGTTG
TATAAAGATGAACTCCAGGGAAAATACTGA