Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047494
CDS Infomation

pacid=37460188 polypeptide=PGSC0003DMP400032151 locus=PGSC0003DMG400018457 ID=PGSC0003DMT400047494.v4.03 annot-version=v4.03
Sequence

ATGGCTAACTTAACATTTACTTTCATGTTGTTGATGCTTCCATTTGTGTTTGCAGCTATT
CAAGTTGGAGCTCAGCAACAGCCCTCCAACATAACCTTAGGTTCTTTTCTTTATCCGAAC
CGAAATCCAAGTTATTGGCCATCTTCTTCAGGCCTTTTCTCATTTGGTTTCTACCAAAAA
GGGGATGGATTTCAAGTTGGCATATGGCTACCTGATAAAACTGTTGTTTGGACTGCAAAT
AGAGATGATCCTCCACTTCATTTGGATGCATATATCGAGTTCACAAAGGGAGGCAAACTT
ATACTATGGACAAAACAGAACAAAAAAATCATTGCAGAATCTCCACAGCCAGTAACTTCA
GCATCCATGCTTGATTCTGGTAACTTTGTTATCTATAACAAAACAATTGTTGTTTGGGAA
AGTTTTGATTATCCAACAGACACCATCCTGGCCGGTCAGCGTCTAACATTGGGCCAGAGC
CTTGTCTCTAGTGTTACTGAAGTTGATCATTCAAGTGGAAGATTTTATCTTAGTATGCAG
GCTGATGGGAACCTTGTTGCCTACCCAACCAATTATCTTAATGGACCTGAGGCTTCCTAT
TGGGGTTTTATGCTACAAAGCAGAGGTGAATTTGGTGAGGTTAGCTCAGTTTTCATAGGT
CTTACTCCAACAGGCCAACTCTTTCGGAATGCTTCTAATGGTTTTCGTTTCCAAGTCAAT
ACCATAGGGAATACCTCTAATCAATCATCAACCAACAAAGCAGCAGCAATTTATCGCGCA
ACTCTTGATCCTGATGGGATTTTTAGGCTTTATACACATAACTTTGACAACTCAAGCTTG
GAAATCAATTGGTCAGCGCTGGAAAACCAATGCAAAGCCAGGGGATTCTGTGGTTTAAAC
AGTTATTGTACTGCAAAAAATGGCAGCAGCATAGGCGATTGTTCTTGTTTTCCTGGATTT
TCATATGTCAACCGTGCAATGAAATTCCAAGGCTGCTATCGGGGATTCGTTTATGAAGAG
TTTTGTGGAAGCAGCAGAGACTCAACATTGGCCTACAATGTCACGGCGATTCAACACTTG
AAAGTTGGAGGATATCCATTTTCTCAGGTTTCAATGGTTGAGCAGGACTGTAGAAATTCT
TGCTTGGATGATTGTACTTGTTGGGCTGCTCTATACATGAATGGAGTTTGCAGCAAATTT
AAGCTTCCATTAATTGATTCGACAATTGAACAAAATGATGAGTCCATCAAGAGCTTCGTC
AAGCAGAGCTATAACATCTCCCAAATGGCAGGTCACTCTACTCCCTATCCTGGAAAAACA
GGGAATAGAAATGAAAGTCGGAAAGAGATAATATTGATTCTATCCCTGGTTCTTGGTTCT
GTAGCATTTCTGTTCACTGTTTTTGCAATTTTCAGTTATATTTTCTACAGAAGCAGAGCG
GACGAATACCAAAAGCTATTGGAAAATCCATATTTGGGGCCAAATGAGGAGTTCACTCTT
CGATCATTTTCTTACAGTGAGCTTGAGAAAGCCACTGAACATTTCAAGGAAGAGATAAGA
CATGGTTCATTCGGGAACGTCTATAAAGGAATTCTATCAGAAGGTAACAGAACAGTTTCT
GTAAAACGACTGGAGAAAATCGGGGATGAAGGAGAAAGGGAATTTAAAGCAGAAATGACT
GCGATTGGGCAAGCTCGTCACAAAAACTTGGTTCATTTGCTTGGTTTTTGCTTGGAGGGA
TCAGAAAAAATTCTTGTGTATGAGTACATGAGCAACGGGTCACTCGCAGATATCATATTC
AATTCAGAAACAAGACCTTCTTGGGAGCAAAGGATGAGACTTGCACTGGACATATCAAGG
GGAATACTTTATCTGCATGAAAAGTGTGAGACTTGCATAATTCACTGCAACATAAAGCCA
CACAATATCCTAGTAGATGATTCGTGGACGGCTAAAATCTCTGAATTTGGGCTTGCAAAG
TTTCTGGTGCCTGATCAAGTAGGAAACCAACTTCAGCTTAAAGGAACAAGAGGATATTCA
GCACCAGAGTTGCAGAATAGTGCATTGATCTCCGATAAGGTAGATGTTTATAGCTACGGA
GTAATGCTCTTGGAGATCATATGCTGTAGAAGTAATATGGATGTCAACGTCTCAACCGAG
GATGAAATCTTTCTTCCTAATTGGGTACACAAATGCTTTGTCGAGAATGATATCAGAAAG
CTAGTGGGAGATAAGGAAGTAGATCATGCGAAGTCCTTGGAGAGGATGGTGAAGGTTGGA
TTGTTATGCATTCACGATAATCCTGATCTGCGCCCTTCTATGAGGAATGTAGTTCTCATG
TTAGAAGGTACTATGGATATACCATTTTTGGCATGGTATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400032151
PEP Infomation

pacid=37460188 transcript=PGSC0003DMT400047494 locus=PGSC0003DMG400018457 ID=PGSC0003DMT400047494.v4.03 annot-version=v4.03
Sequence

MANLTFTFMLLMLPFVFAAIQVGAQQQPSNITLGSFLYPNRNPSYWPSSSGLFSFGFYQK
GDGFQVGIWLPDKTVVWTANRDDPPLHLDAYIEFTKGGKLILWTKQNKKIIAESPQPVTS
ASMLDSGNFVIYNKTIVVWESFDYPTDTILAGQRLTLGQSLVSSVTEVDHSSGRFYLSMQ
ADGNLVAYPTNYLNGPEASYWGFMLQSRGEFGEVSSVFIGLTPTGQLFRNASNGFRFQVN
TIGNTSNQSSTNKAAAIYRATLDPDGIFRLYTHNFDNSSLEINWSALENQCKARGFCGLN
SYCTAKNGSSIGDCSCFPGFSYVNRAMKFQGCYRGFVYEEFCGSSRDSTLAYNVTAIQHL
KVGGYPFSQVSMVEQDCRNSCLDDCTCWAALYMNGVCSKFKLPLIDSTIEQNDESIKSFV
KQSYNISQMAGHSTPYPGKTGNRNESRKEIILILSLVLGSVAFLFTVFAIFSYIFYRSRA
DEYQKLLENPYLGPNEEFTLRSFSYSELEKATEHFKEEIRHGSFGNVYKGILSEGNRTVS
VKRLEKIGDEGEREFKAEMTAIGQARHKNLVHLLGFCLEGSEKILVYEYMSNGSLADIIF
NSETRPSWEQRMRLALDISRGILYLHEKCETCIIHCNIKPHNILVDDSWTAKISEFGLAK
FLVPDQVGNQLQLKGTRGYSAPELQNSALISDKVDVYSYGVMLLEIICCRSNMDVNVSTE
DEIFLPNWVHKCFVENDIRKLVGDKEVDHAKSLERMVKVGLLCIHDNPDLRPSMRNVVLM
LEGTMDIPFLAWY*

Transcript Sequence

Transcript ID

PGSC0003DMT400047494
Transcript Infomation

pacid=37460188 locus=PGSC0003DMG400018457 ID=PGSC0003DMT400047494.v4.03 annot-version=v4.03
Sequence

ATGGCTAACTTAACATTTACTTTCATGTTGTTGATGCTTCCATTTGTGTTTGCAGCTATT
CAAGTTGGAGCTCAGCAACAGCCCTCCAACATAACCTTAGGTTCTTTTCTTTATCCGAAC
CGAAATCCAAGTTATTGGCCATCTTCTTCAGGCCTTTTCTCATTTGGTTTCTACCAAAAA
GGGGATGGATTTCAAGTTGGCATATGGCTACCTGATAAAACTGTTGTTTGGACTGCAAAT
AGAGATGATCCTCCACTTCATTTGGATGCATATATCGAGTTCACAAAGGGAGGCAAACTT
ATACTATGGACAAAACAGAACAAAAAAATCATTGCAGAATCTCCACAGCCAGTAACTTCA
GCATCCATGCTTGATTCTGGTAACTTTGTTATCTATAACAAAACAATTGTTGTTTGGGAA
AGTTTTGATTATCCAACAGACACCATCCTGGCCGGTCAGCGTCTAACATTGGGCCAGAGC
CTTGTCTCTAGTGTTACTGAAGTTGATCATTCAAGTGGAAGATTTTATCTTAGTATGCAG
GCTGATGGGAACCTTGTTGCCTACCCAACCAATTATCTTAATGGACCTGAGGCTTCCTAT
TGGGGTTTTATGCTACAAAGCAGAGGTGAATTTGGTGAGGTTAGCTCAGTTTTCATAGGT
CTTACTCCAACAGGCCAACTCTTTCGGAATGCTTCTAATGGTTTTCGTTTCCAAGTCAAT
ACCATAGGGAATACCTCTAATCAATCATCAACCAACAAAGCAGCAGCAATTTATCGCGCA
ACTCTTGATCCTGATGGGATTTTTAGGCTTTATACACATAACTTTGACAACTCAAGCTTG
GAAATCAATTGGTCAGCGCTGGAAAACCAATGCAAAGCCAGGGGATTCTGTGGTTTAAAC
AGTTATTGTACTGCAAAAAATGGCAGCAGCATAGGCGATTGTTCTTGTTTTCCTGGATTT
TCATATGTCAACCGTGCAATGAAATTCCAAGGCTGCTATCGGGGATTCGTTTATGAAGAG
TTTTGTGGAAGCAGCAGAGACTCAACATTGGCCTACAATGTCACGGCGATTCAACACTTG
AAAGTTGGAGGATATCCATTTTCTCAGGTTTCAATGGTTGAGCAGGACTGTAGAAATTCT
TGCTTGGATGATTGTACTTGTTGGGCTGCTCTATACATGAATGGAGTTTGCAGCAAATTT
AAGCTTCCATTAATTGATTCGACAATTGAACAAAATGATGAGTCCATCAAGAGCTTCGTC
AAGCAGAGCTATAACATCTCCCAAATGGCAGGTCACTCTACTCCCTATCCTGGAAAAACA
GGGAATAGAAATGAAAGTCGGAAAGAGATAATATTGATTCTATCCCTGGTTCTTGGTTCT
GTAGCATTTCTGTTCACTGTTTTTGCAATTTTCAGTTATATTTTCTACAGAAGCAGAGCG
GACGAATACCAAAAGCTATTGGAAAATCCATATTTGGGGCCAAATGAGGAGTTCACTCTT
CGATCATTTTCTTACAGTGAGCTTGAGAAAGCCACTGAACATTTCAAGGAAGAGATAAGA
CATGGTTCATTCGGGAACGTCTATAAAGGAATTCTATCAGAAGGTAACAGAACAGTTTCT
GTAAAACGACTGGAGAAAATCGGGGATGAAGGAGAAAGGGAATTTAAAGCAGAAATGACT
GCGATTGGGCAAGCTCGTCACAAAAACTTGGTTCATTTGCTTGGTTTTTGCTTGGAGGGA
TCAGAAAAAATTCTTGTGTATGAGTACATGAGCAACGGGTCACTCGCAGATATCATATTC
AATTCAGAAACAAGACCTTCTTGGGAGCAAAGGATGAGACTTGCACTGGACATATCAAGG
GGAATACTTTATCTGCATGAAAAGTGTGAGACTTGCATAATTCACTGCAACATAAAGCCA
CACAATATCCTAGTAGATGATTCGTGGACGGCTAAAATCTCTGAATTTGGGCTTGCAAAG
TTTCTGGTGCCTGATCAAGTAGGAAACCAACTTCAGCTTAAAGGAACAAGAGGATATTCA
GCACCAGAGTTGCAGAATAGTGCATTGATCTCCGATAAGGTAGATGTTTATAGCTACGGA
GTAATGCTCTTGGAGATCATATGCTGTAGAAGTAATATGGATGTCAACGTCTCAACCGAG
GATGAAATCTTTCTTCCTAATTGGGTACACAAATGCTTTGTCGAGAATGATATCAGAAAG
CTAGTGGGAGATAAGGAAGTAGATCATGCGAAGTCCTTGGAGAGGATGGTGAAGGTTGGA
TTGTTATGCATTCACGATAATCCTGATCTGCGCCCTTCTATGAGGAATGTAGTTCTCATG
TTAGAAGGTACTATGGATATACCATTTTTGGCATGGTATTAA