Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047468
CDS Infomation

pacid=37463600 polypeptide=PGSC0003DMP400032134 locus=PGSC0003DMG402018444 ID=PGSC0003DMT400047468.v4.03 annot-version=v4.03
Sequence

ATGAAGGGAACAAACAGAAGCCAAAGGCAGAGTTTCCAACAACACTTAATCATTGATTAC
TCTGCTGGACCTAGAAAGCATCATCACAAGTTTGGCTTTTCCTTCAAAAGTGTCACGAAA
AAGCTAAGTGATGTTTTCTCTACACTTGTCTTTTGGCAGAAGAAAGCCAATTCTGAGACC
AACAGAAGTCAAAGTCCAGAGAGGGAGGTCTCCTCATCAAAAGGTAGTAACTCTTCCGGA
AGCAAGAGGGGAATTTTGTTGAAACCCCAATACTCTAATTCCCATAGAACTTCAATGGCT
ACCAGGGAGCAGCTAGGTACATTCGAGTTCTCGTTTGAAGAAATTTGCCAGGCGACTGGA
AATTTTTCTGCTGTACACAAGATTGGTGAAGGTGGGTTTGGGACAGTGTACAAGGGAAAG
CTTAAGAATGGATTTCCTGTTGCTATTAAGCGTGCTAAGAAGGATTTGCGAGTGTTGGCA
GAATTCAAGAATGAAGTCCAGGCATTGTCAAAGATTGAACATCTAAATCTTGTTAGATTT
TATGGATTTCTGGAGCTCAGAGATGAGAGGATTATTATCACTGAATATGTCAGCAATGGA
ACACTTCGAGAACACTTGGATGGTAAGAATGGAACCGAGCTTGAAGTTGCCGAGCGTTTG
AGCATTGCTATTGATGTAGCTCATGCTATTACCTATCTGCACTCGTACACAGATCCTCCA
ATTATCCATAGAGATATAAAAGCATCTAACATACTCATCACAGAAAATCTCCATGCTAAA
GTAGCAGACTTTGGATTTGCACGATTAGCTGCTGAAGATCCCTGTGCTACACACATTTCT
ACACAAATAAAAGGGACTGCCGGCTATTTAGATCCTGAGTACTTAAGGACATACCAGCTT
ACTGAAAAGAGTGATGTCTACTCCTTTGGTGTTTTGCTTGTAGAGATGATGACAGGAAGA
CATCCCATTGAAACAAATCGAACCATTGATGAGAGAGTGACGATAAAATGGGCGATGAGA
ATACTAAAACATGGGGATTCTGTAATAGCAATGGATCCAAGATTGCGAAGAAGCCCCGCA
TCAATTGAGGCTGTTGAAAAAGTACTCAAACTAGCTAGACAATGCCTTGCACCTTCCAGA
TTGGCAAGACCAGCTATGAAAAAATGTGCAGAGGTACTATGGGGAATTCGAACACAGTTT
GTAGAGAAAAGTATCCCAAAAACTTCAACCTCTAGCCACTCTACAAACTTTCTGCACAGA
AATGCAAAAAGGGATTGGGAGGATTTATACACAGTTAACTATAGCAAGAACTACAAATTT
GTGTCCACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032134
PEP Infomation

pacid=37463600 transcript=PGSC0003DMT400047468 locus=PGSC0003DMG402018444 ID=PGSC0003DMT400047468.v4.03 annot-version=v4.03
Sequence

MKGTNRSQRQSFQQHLIIDYSAGPRKHHHKFGFSFKSVTKKLSDVFSTLVFWQKKANSET
NRSQSPEREVSSSKGSNSSGSKRGILLKPQYSNSHRTSMATREQLGTFEFSFEEICQATG
NFSAVHKIGEGGFGTVYKGKLKNGFPVAIKRAKKDLRVLAEFKNEVQALSKIEHLNLVRF
YGFLELRDERIIITEYVSNGTLREHLDGKNGTELEVAERLSIAIDVAHAITYLHSYTDPP
IIHRDIKASNILITENLHAKVADFGFARLAAEDPCATHISTQIKGTAGYLDPEYLRTYQL
TEKSDVYSFGVLLVEMMTGRHPIETNRTIDERVTIKWAMRILKHGDSVIAMDPRLRRSPA
SIEAVEKVLKLARQCLAPSRLARPAMKKCAEVLWGIRTQFVEKSIPKTSTSSHSTNFLHR
NAKRDWEDLYTVNYSKNYKFVST*

Transcript Sequence

Transcript ID

PGSC0003DMT400047468
Transcript Infomation

pacid=37463600 locus=PGSC0003DMG402018444 ID=PGSC0003DMT400047468.v4.03 annot-version=v4.03
Sequence

ATGAAGGGAACAAACAGAAGCCAAAGGCAGAGTTTCCAACAACACTTAATCATTGATTAC
TCTGCTGGACCTAGAAAGCATCATCACAAGTTTGGCTTTTCCTTCAAAAGTGTCACGAAA
AAGCTAAGTGATGTTTTCTCTACACTTGTCTTTTGGCAGAAGAAAGCCAATTCTGAGACC
AACAGAAGTCAAAGTCCAGAGAGGGAGGTCTCCTCATCAAAAGGTAGTAACTCTTCCGGA
AGCAAGAGGGGAATTTTGTTGAAACCCCAATACTCTAATTCCCATAGAACTTCAATGGCT
ACCAGGGAGCAGCTAGGTACATTCGAGTTCTCGTTTGAAGAAATTTGCCAGGCGACTGGA
AATTTTTCTGCTGTACACAAGATTGGTGAAGGTGGGTTTGGGACAGTGTACAAGGGAAAG
CTTAAGAATGGATTTCCTGTTGCTATTAAGCGTGCTAAGAAGGATTTGCGAGTGTTGGCA
GAATTCAAGAATGAAGTCCAGGCATTGTCAAAGATTGAACATCTAAATCTTGTTAGATTT
TATGGATTTCTGGAGCTCAGAGATGAGAGGATTATTATCACTGAATATGTCAGCAATGGA
ACACTTCGAGAACACTTGGATGGTAAGAATGGAACCGAGCTTGAAGTTGCCGAGCGTTTG
AGCATTGCTATTGATGTAGCTCATGCTATTACCTATCTGCACTCGTACACAGATCCTCCA
ATTATCCATAGAGATATAAAAGCATCTAACATACTCATCACAGAAAATCTCCATGCTAAA
GTAGCAGACTTTGGATTTGCACGATTAGCTGCTGAAGATCCCTGTGCTACACACATTTCT
ACACAAATAAAAGGGACTGCCGGCTATTTAGATCCTGAGTACTTAAGGACATACCAGCTT
ACTGAAAAGAGTGATGTCTACTCCTTTGGTGTTTTGCTTGTAGAGATGATGACAGGAAGA
CATCCCATTGAAACAAATCGAACCATTGATGAGAGAGTGACGATAAAATGGGCGATGAGA
ATACTAAAACATGGGGATTCTGTAATAGCAATGGATCCAAGATTGCGAAGAAGCCCCGCA
TCAATTGAGGCTGTTGAAAAAGTACTCAAACTAGCTAGACAATGCCTTGCACCTTCCAGA
TTGGCAAGACCAGCTATGAAAAAATGTGCAGAGGTACTATGGGGAATTCGAACACAGTTT
GTAGAGAAAAGTATCCCAAAAACTTCAACCTCTAGCCACTCTACAAACTTTCTGCACAGA
AATGCAAAAAGGGATTGGGAGGATTTATACACAGTTAACTATAGCAAGAACTACAAATTT
GTGTCCACTTGA