Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047445
CDS Infomation

pacid=37443636 polypeptide=PGSC0003DMP400032124 locus=PGSC0003DMG400018438 ID=PGSC0003DMT400047445.v4.03 annot-version=v4.03
Sequence

ATGTATAGAAGTAGAGCCATCATACTCACATCCAAATCATTGAGAACTCTATCAAAGGTA
AGCAGACAATCTCTTCATTTAGAATCGTTAAAGTTCGTTACTTTTGTAAGAAGTATCAGC
ACTGCTACTCAAATATCCGAGATTGATAATCATAGTGAGTTAAAGGGGGAAAATAACAGT
GATTTTCAGCAAAACCCAGATGGGGATTTCAATTATAACTCGAACAATACGGGTTCTTTG
AATAAATTAAACTGGCAGGGTCAGGAATGGGCGTATAATCAGCAGTTATCTCGTAGCACG
CAAGGTGGCGGGAGTTATAGTGGAAATTCTAGGAGAATAGAGCAGAACCCTAGTGGGGTT
AATCCGCAAAAACCTAGAACTGAATTTCATGAACAAAAAGATACCAAAGGGTTTCAGCAG
AACCCATATGCGAAAAATGAGAACTTTTCATCTGGGTATGTTAATGTTTCATCTAGAAAT
GAGTTTCAGCAAACTGTTGGGAGAAATAATGATTTCAGGTCTCGAAAGGATTATCAAAGT
AATTTAGTTCATAATAGAAATGATAGTGGTGGTGAAAATTCGTCAAATTTGCTGCGTAGT
TCCAGGTTTGAGGGAGGTTTAGAAGCTCAGCCGAGTCAAAATGGAGTATATGGACACTAT
CAACAGAATTTAAATGGTGGAAACAGTGAAATGTCACGGCAGAATTTTAGTGGCAATTAC
ACGAGTAACGTAGGAGTGCCTCAGCAAAACCTTTCCAATTACGACCCTGGAAATGTAAGG
AATGTTCAATCTGAAAATTCTGAAACGTATCCACAAAATGCAAGTGGGTATAACATGGAA
AGGCATACGAATTCAAGTGGCTACTCAAGGGAGATGATGGGGCAATATCAGCAAAACTTA
AGCGGCTTTAACCCCTCTAGTGCTGGACATCAAGCTTCTTATCAATATCAGAATGGAATA
GTTGGCCATCAAGAAATGAGAAGTTCAACACCTGTCGAACAGTCGATTGATTCTGATGAT
AGCAGCAGTAAAAAAGGTTCAGTTGATGAGCTTGATGACTTATGTAAAGAAGGCAAAGTA
AAGGAGGCAGTAGAAATTTTGCAGTTGTTGGAGCAGCAACATGTCACAGTCGATTTGTCT
CGATATATTATGTTGATGGATGTGTGTAGTGAGGATAAATCCCTTGAGGATGCTAAATCA
ATTCATGAGCACCTTGTGAGATCTCATCCTCATCTTGACATCAAAATGTACAATAAGATT
CTTGAAATGTATGGAAAATGTGGCTCCATGAAAGATGCCTTCTTAGTGTTTCGAAAAATG
CCTCAACGAAATCTGACTTCTTGGGACACAATGATTACATGGCTTGGTAAGAATGGTTTT
GGAGAAGATGCAATAGAATTGTTTGGGGAATTCAAGGAAACTGGGATGAAACCTGATGGC
CAAATGTTTCTGGGAGTCTTCCATGCTTGTAGTGTTGTTGGTGATATAGTTGAGGGCATG
TTGCACTTTGAATCAATGAGTAAGGATTATGACATTGATTTATCAATGGAGCAATATGTT
GGAGTGGTAGATATGTTGGGAAGTACGGGATATCTTGATGAAGCTATGGAGTTCATTGAA
AGGATGCCTATAGAGCCAAGTATTGAAGTATGGGAAACCATGATGAATCTCTGTAGAATT
CATGGGAACTTGGAGCTTGGGGATCGTTGTGCTGAGATTGTTGAGCTCCTAGACCCATCT
CGTTTGGATGAACAGTCAAAGACAGGTTTTTTGGCTGTAAAAGCATCAGACATTGCTAAG
GAGAAAGAGAAGAAGAGATCTGCCCAAAGTCTTCTTGAGGCTAGAAGCAAAGTTCATGAA
TATCGTGCGGGAGATAGGTCACATCCCGATCATGAGAAGATATATGCATTGCTTAGGGGT
TTAAAGCAGCTAATGAAGGAGGACGGTTATATACCAGAGACGAAATTTGTGTTACATGAT
GTAGACCAAGAAACTAAAGAGGACGCTTTAATGGCTCACAGCGAGAGATTGGCTTTTGCT
CAAGGTCTTATGAATAGCTCTGCACGATCACCAATCCGGATTATAAAGAATCTGCGTGTC
TGTGGTGATTGCCATAATGCATTAAAGATTGCTTCAAAGCTTGTTGGTCGGGAAATTATC
ATGCGAGATGCTAAGAGATTTCATCATTTAAAAGATGGATTGTGCTCGTGTCGGGATTAT
TGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032124
PEP Infomation

pacid=37443636 transcript=PGSC0003DMT400047445 locus=PGSC0003DMG400018438 ID=PGSC0003DMT400047445.v4.03 annot-version=v4.03
Sequence

MYRSRAIILTSKSLRTLSKVSRQSLHLESLKFVTFVRSISTATQISEIDNHSELKGENNS
DFQQNPDGDFNYNSNNTGSLNKLNWQGQEWAYNQQLSRSTQGGGSYSGNSRRIEQNPSGV
NPQKPRTEFHEQKDTKGFQQNPYAKNENFSSGYVNVSSRNEFQQTVGRNNDFRSRKDYQS
NLVHNRNDSGGENSSNLLRSSRFEGGLEAQPSQNGVYGHYQQNLNGGNSEMSRQNFSGNY
TSNVGVPQQNLSNYDPGNVRNVQSENSETYPQNASGYNMERHTNSSGYSREMMGQYQQNL
SGFNPSSAGHQASYQYQNGIVGHQEMRSSTPVEQSIDSDDSSSKKGSVDELDDLCKEGKV
KEAVEILQLLEQQHVTVDLSRYIMLMDVCSEDKSLEDAKSIHEHLVRSHPHLDIKMYNKI
LEMYGKCGSMKDAFLVFRKMPQRNLTSWDTMITWLGKNGFGEDAIELFGEFKETGMKPDG
QMFLGVFHACSVVGDIVEGMLHFESMSKDYDIDLSMEQYVGVVDMLGSTGYLDEAMEFIE
RMPIEPSIEVWETMMNLCRIHGNLELGDRCAEIVELLDPSRLDEQSKTGFLAVKASDIAK
EKEKKRSAQSLLEARSKVHEYRAGDRSHPDHEKIYALLRGLKQLMKEDGYIPETKFVLHD
VDQETKEDALMAHSERLAFAQGLMNSSARSPIRIIKNLRVCGDCHNALKIASKLVGREII
MRDAKRFHHLKDGLCSCRDYW*

Transcript Sequence

Transcript ID

PGSC0003DMT400047445
Transcript Infomation

pacid=37443636 locus=PGSC0003DMG400018438 ID=PGSC0003DMT400047445.v4.03 annot-version=v4.03
Sequence

ATGTATAGAAGTAGAGCCATCATACTCACATCCAAATCATTGAGAACTCTATCAAAGGTA
AGCAGACAATCTCTTCATTTAGAATCGTTAAAGTTCGTTACTTTTGTAAGAAGTATCAGC
ACTGCTACTCAAATATCCGAGATTGATAATCATAGTGAGTTAAAGGGGGAAAATAACAGT
GATTTTCAGCAAAACCCAGATGGGGATTTCAATTATAACTCGAACAATACGGGTTCTTTG
AATAAATTAAACTGGCAGGGTCAGGAATGGGCGTATAATCAGCAGTTATCTCGTAGCACG
CAAGGTGGCGGGAGTTATAGTGGAAATTCTAGGAGAATAGAGCAGAACCCTAGTGGGGTT
AATCCGCAAAAACCTAGAACTGAATTTCATGAACAAAAAGATACCAAAGGGTTTCAGCAG
AACCCATATGCGAAAAATGAGAACTTTTCATCTGGGTATGTTAATGTTTCATCTAGAAAT
GAGTTTCAGCAAACTGTTGGGAGAAATAATGATTTCAGGTCTCGAAAGGATTATCAAAGT
AATTTAGTTCATAATAGAAATGATAGTGGTGGTGAAAATTCGTCAAATTTGCTGCGTAGT
TCCAGGTTTGAGGGAGGTTTAGAAGCTCAGCCGAGTCAAAATGGAGTATATGGACACTAT
CAACAGAATTTAAATGGTGGAAACAGTGAAATGTCACGGCAGAATTTTAGTGGCAATTAC
ACGAGTAACGTAGGAGTGCCTCAGCAAAACCTTTCCAATTACGACCCTGGAAATGTAAGG
AATGTTCAATCTGAAAATTCTGAAACGTATCCACAAAATGCAAGTGGGTATAACATGGAA
AGGCATACGAATTCAAGTGGCTACTCAAGGGAGATGATGGGGCAATATCAGCAAAACTTA
AGCGGCTTTAACCCCTCTAGTGCTGGACATCAAGCTTCTTATCAATATCAGAATGGAATA
GTTGGCCATCAAGAAATGAGAAGTTCAACACCTGTCGAACAGTCGATTGATTCTGATGAT
AGCAGCAGTAAAAAAGGTTCAGTTGATGAGCTTGATGACTTATGTAAAGAAGGCAAAGTA
AAGGAGGCAGTAGAAATTTTGCAGTTGTTGGAGCAGCAACATGTCACAGTCGATTTGTCT
CGATATATTATGTTGATGGATGTGTGTAGTGAGGATAAATCCCTTGAGGATGCTAAATCA
ATTCATGAGCACCTTGTGAGATCTCATCCTCATCTTGACATCAAAATGTACAATAAGATT
CTTGAAATGTATGGAAAATGTGGCTCCATGAAAGATGCCTTCTTAGTGTTTCGAAAAATG
CCTCAACGAAATCTGACTTCTTGGGACACAATGATTACATGGCTTGGTAAGAATGGTTTT
GGAGAAGATGCAATAGAATTGTTTGGGGAATTCAAGGAAACTGGGATGAAACCTGATGGC
CAAATGTTTCTGGGAGTCTTCCATGCTTGTAGTGTTGTTGGTGATATAGTTGAGGGCATG
TTGCACTTTGAATCAATGAGTAAGGATTATGACATTGATTTATCAATGGAGCAATATGTT
GGAGTGGTAGATATGTTGGGAAGTACGGGATATCTTGATGAAGCTATGGAGTTCATTGAA
AGGATGCCTATAGAGCCAAGTATTGAAGTATGGGAAACCATGATGAATCTCTGTAGAATT
CATGGGAACTTGGAGCTTGGGGATCGTTGTGCTGAGATTGTTGAGCTCCTAGACCCATCT
CGTTTGGATGAACAGTCAAAGACAGGTTTTTTGGCTGTAAAAGCATCAGACATTGCTAAG
GAGAAAGAGAAGAAGAGATCTGCCCAAAGTCTTCTTGAGGCTAGAAGCAAAGTTCATGAA
TATCGTGCGGGAGATAGGTCACATCCCGATCATGAGAAGATATATGCATTGCTTAGGGGT
TTAAAGCAGCTAATGAAGGAGGACGGTTATATACCAGAGACGAAATTTGTGTTACATGAT
GTAGACCAAGAAACTAAAGAGGACGCTTTAATGGCTCACAGCGAGAGATTGGCTTTTGCT
CAAGGTCTTATGAATAGCTCTGCACGATCACCAATCCGGATTATAAAGAATCTGCGTGTC
TGTGGTGATTGCCATAATGCATTAAAGATTGCTTCAAAGCTTGTTGGTCGGGAAATTATC
ATGCGAGATGCTAAGAGATTTCATCATTTAAAAGATGGATTGTGCTCGTGTCGGGATTAT
TGGTGA