Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047444
CDS Infomation

pacid=37444472 polypeptide=PGSC0003DMP400032123 locus=PGSC0003DMG400018437 ID=PGSC0003DMT400047444.v4.03 annot-version=v4.03
Sequence

ATGACGTGCGATACGTCTTCATCGGGATGCGGTTTGGAGAAATTGGAGTCGCTGAGTGAT
GATTCCATAACAGAGATATCGGAAAACTGGAATGGCTTTTGCTCTTTTTCAGAAGCTCTT
CTCAAAGGCAGTGGTGATTTGTCATTCAGCGATGAGTTTGTAATGCGAGCTAAGAATCTC
TGCAAACATGGCCTTTCATCTCTAGTTGAACAACACTTCCTTCGTTGCATTGAGGAAATT
TTTGAGAGAAATGGAGCAAAAAGGTTCTGGAGTTATTTTGAACCTTACAGAAATGCTGCA
CCATCTGAAACTAATAAGGATCTCATTCTAGAAGAAGAAATTCAGCAAGTAATATGTAAA
GCGTTGGAAGAAATATCATCTCAAAAGCAATTCCAGGAGAAGTGCCTATTATTGTTGGCT
CGTGCTTTACAGTCCTATGAAGAAGACAAATTGCAAGGACAAGCGAACCCAGATTCTACT
CGAGTTTATCTGTTCTCGAAATATCAACTAATTGTGTCTTCAGTTCTTTTGGCTAGCCTT
CCTCACCATTTTCCTGGGATACTTCACTGGTACTTCAAAGGAAGACTGGAGGAGCTGAGT
ACAATTGCAGCTGCGAACTCTGAGGATGAAGAGGAGTTAGGCATGGATGATAAAATGGAT
TTAGACGAGAAAAGCAAACTTCCCTACAAATGTGGTGACATGGATAGTGATATAAACCAT
AAATATACTGTATTTTCAGAGAACAATAAGTTGGTGAAGAACATTGGAATGGTTGTTCGT
AATCTGAGAAATATTGGCTTTACATCTATGGCGGAAGATGCATATGCTTCTGCTATATTT
TTTCTTTTAAAGGACAAAGTACATGATTTGGCTGGTGATGACTATAGGAGCTCTGTTTTG
GAGTCCATCAAAGCATGGATACAGGCTGTGCCCCTTCAGTTCTTACGAGCACTTCTTGAT
TACCTTGGAGATTTTACTAACTGCAATGACCCTTCCCCTGGCCTGAAATCTCCCCTGGCA
TCCCACCCCTCCTTGTGCTATTCTGGAACTGGAATTCCATCTGAGGGGCTTGTTAGATGG
CAGTTGCGCTTAGAGTATTATGCTTATGAAACCTTGCAGGATCTCAGAATAGCCAAACTT
TTTGAAATCATTGTGGACTATCCGGACAGTGCTCCTGCTATTGAAGACTTGAAACAATGT
CTTGAGTATACTGGGCAACATTCAAAGCTGGTAGATTCTTTTATCTCATCTCTGAGATAT
AGATTACTAACAGCTGGTGCCTCAACCAATGATATATTGCACCAATATGTTTCAACAATC
AAAGCACTTCGAACTATAGATCCTGCAGGTGTTTTTCTTGAAGCTGTTGGTGAACCAATA
AGGGAATACCTGAGGGGGAGAAAAGATACAATTAAATGCATTGTGACCATGCTTACTGAT
GGAACTGGTGGAAATCCCAATGGACCAGGCAGTTCTGGGGATAGCCTGCTGGAAGAATTG
AATAGAGATGAAGAGAGTCAAGAGAACAGTACTGTTGATGATGATATTAACTCTGATGAC
AAGCAAGCATGGATTAATGCACAAAACTGGGAGCCTGACCCTGTAGAGGCCGACCCATCG
AAGGGAAGCAGATATCGAAGGAAGGTTGACATACTTGGTATGATAGTTGGCATAATTGGT
TCCAAAGATCAGCTGGTTAATGAATACCGTGTAATGCTGGCTGAAAAGCTTTTGAACAAA
TCTGATTATGACATTGATGCCGAAATACGTACTCTAGAGCTTCTCAAGATTCATTTTGGG
GAAAGCAGTATGCAGAAATGTGAAATAATGCTTAATGATTTGATCGACTCAAAGAGGACA
AATACAAATATAAAAGCAACTATCAAGCATCAACCACAGCCAGAGCAAAGGGACCTTGAT
GTATCTCTAGACAATCTTAATGCTACCATCATATCTTCAAATTTCTGGCCTCCTATTCAG
GATGAGGCAGTCAACTTACCAGAGTCTGTGGAGCAGCTACTGACTGATTATGCAAAAAGG
TATACTGAAGTCAAGACACCACGTAAGCTAATATGGAAGAAAAATCTGGGCAGTGTAAAG
TTGGAGCTCCAATTCGAAGATAGAGCAATGCAGTTTAATGTTACTCCTTTGCATGCTTCA
ATTATTATGCAGTTTCAAGATCAGAAAAAGTGGATATCTAAGAATCTTGCAGCTGCAGTT
GGAGTACCTGTTGATGTGTTGAATAGGAGGATAAATTTTTGGTTAAGCAAGGGAGTTCTG
GCAGAGTCAATGGGGGCAGACTCTGCTGATCATGCTTTTACTCTGGTGGAAACCATGAAT
GATACTGGTAAAAGTGGAACTATTGATGGAGGCTGTGAGGAGCTATTGGCAGGTGAGGAC
GACGGAGAACGCTCTGTGGCCTCTGTTGAAGATCAACTGCGAAAAGAGATGACTGTCTAT
GAGAAATTTATCACTGGGATGCTTACCAATTTTGGCAGCATGGCATTGGATCGTATTCAT
AATACGCTCAAGATGTTCTGCATTGCTGATCCTACATATGACAAATCACTGCAACAACTG
CAAAGCTTCTTATCTGGTTTAGTTGCCGAGGAGAAGTTGGAATTCAGAGATGGAATGTAC
TTTCTGAAAAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032123
PEP Infomation

pacid=37444472 transcript=PGSC0003DMT400047444 locus=PGSC0003DMG400018437 ID=PGSC0003DMT400047444.v4.03 annot-version=v4.03
Sequence

MTCDTSSSGCGLEKLESLSDDSITEISENWNGFCSFSEALLKGSGDLSFSDEFVMRAKNL
CKHGLSSLVEQHFLRCIEEIFERNGAKRFWSYFEPYRNAAPSETNKDLILEEEIQQVICK
ALEEISSQKQFQEKCLLLLARALQSYEEDKLQGQANPDSTRVYLFSKYQLIVSSVLLASL
PHHFPGILHWYFKGRLEELSTIAAANSEDEEELGMDDKMDLDEKSKLPYKCGDMDSDINH
KYTVFSENNKLVKNIGMVVRNLRNIGFTSMAEDAYASAIFFLLKDKVHDLAGDDYRSSVL
ESIKAWIQAVPLQFLRALLDYLGDFTNCNDPSPGLKSPLASHPSLCYSGTGIPSEGLVRW
QLRLEYYAYETLQDLRIAKLFEIIVDYPDSAPAIEDLKQCLEYTGQHSKLVDSFISSLRY
RLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIREYLRGRKDTIKCIVTMLTD
GTGGNPNGPGSSGDSLLEELNRDEESQENSTVDDDINSDDKQAWINAQNWEPDPVEADPS
KGSRYRRKVDILGMIVGIIGSKDQLVNEYRVMLAEKLLNKSDYDIDAEIRTLELLKIHFG
ESSMQKCEIMLNDLIDSKRTNTNIKATIKHQPQPEQRDLDVSLDNLNATIISSNFWPPIQ
DEAVNLPESVEQLLTDYAKRYTEVKTPRKLIWKKNLGSVKLELQFEDRAMQFNVTPLHAS
IIMQFQDQKKWISKNLAAAVGVPVDVLNRRINFWLSKGVLAESMGADSADHAFTLVETMN
DTGKSGTIDGGCEELLAGEDDGERSVASVEDQLRKEMTVYEKFITGMLTNFGSMALDRIH
NTLKMFCIADPTYDKSLQQLQSFLSGLVAEEKLEFRDGMYFLKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400047444
Transcript Infomation

pacid=37444472 locus=PGSC0003DMG400018437 ID=PGSC0003DMT400047444.v4.03 annot-version=v4.03
Sequence

ATGACGTGCGATACGTCTTCATCGGGATGCGGTTTGGAGAAATTGGAGTCGCTGAGTGAT
GATTCCATAACAGAGATATCGGAAAACTGGAATGGCTTTTGCTCTTTTTCAGAAGCTCTT
CTCAAAGGCAGTGGTGATTTGTCATTCAGCGATGAGTTTGTAATGCGAGCTAAGAATCTC
TGCAAACATGGCCTTTCATCTCTAGTTGAACAACACTTCCTTCGTTGCATTGAGGAAATT
TTTGAGAGAAATGGAGCAAAAAGGTTCTGGAGTTATTTTGAACCTTACAGAAATGCTGCA
CCATCTGAAACTAATAAGGATCTCATTCTAGAAGAAGAAATTCAGCAAGTAATATGTAAA
GCGTTGGAAGAAATATCATCTCAAAAGCAATTCCAGGAGAAGTGCCTATTATTGTTGGCT
CGTGCTTTACAGTCCTATGAAGAAGACAAATTGCAAGGACAAGCGAACCCAGATTCTACT
CGAGTTTATCTGTTCTCGAAATATCAACTAATTGTGTCTTCAGTTCTTTTGGCTAGCCTT
CCTCACCATTTTCCTGGGATACTTCACTGGTACTTCAAAGGAAGACTGGAGGAGCTGAGT
ACAATTGCAGCTGCGAACTCTGAGGATGAAGAGGAGTTAGGCATGGATGATAAAATGGAT
TTAGACGAGAAAAGCAAACTTCCCTACAAATGTGGTGACATGGATAGTGATATAAACCAT
AAATATACTGTATTTTCAGAGAACAATAAGTTGGTGAAGAACATTGGAATGGTTGTTCGT
AATCTGAGAAATATTGGCTTTACATCTATGGCGGAAGATGCATATGCTTCTGCTATATTT
TTTCTTTTAAAGGACAAAGTACATGATTTGGCTGGTGATGACTATAGGAGCTCTGTTTTG
GAGTCCATCAAAGCATGGATACAGGCTGTGCCCCTTCAGTTCTTACGAGCACTTCTTGAT
TACCTTGGAGATTTTACTAACTGCAATGACCCTTCCCCTGGCCTGAAATCTCCCCTGGCA
TCCCACCCCTCCTTGTGCTATTCTGGAACTGGAATTCCATCTGAGGGGCTTGTTAGATGG
CAGTTGCGCTTAGAGTATTATGCTTATGAAACCTTGCAGGATCTCAGAATAGCCAAACTT
TTTGAAATCATTGTGGACTATCCGGACAGTGCTCCTGCTATTGAAGACTTGAAACAATGT
CTTGAGTATACTGGGCAACATTCAAAGCTGGTAGATTCTTTTATCTCATCTCTGAGATAT
AGATTACTAACAGCTGGTGCCTCAACCAATGATATATTGCACCAATATGTTTCAACAATC
AAAGCACTTCGAACTATAGATCCTGCAGGTGTTTTTCTTGAAGCTGTTGGTGAACCAATA
AGGGAATACCTGAGGGGGAGAAAAGATACAATTAAATGCATTGTGACCATGCTTACTGAT
GGAACTGGTGGAAATCCCAATGGACCAGGCAGTTCTGGGGATAGCCTGCTGGAAGAATTG
AATAGAGATGAAGAGAGTCAAGAGAACAGTACTGTTGATGATGATATTAACTCTGATGAC
AAGCAAGCATGGATTAATGCACAAAACTGGGAGCCTGACCCTGTAGAGGCCGACCCATCG
AAGGGAAGCAGATATCGAAGGAAGGTTGACATACTTGGTATGATAGTTGGCATAATTGGT
TCCAAAGATCAGCTGGTTAATGAATACCGTGTAATGCTGGCTGAAAAGCTTTTGAACAAA
TCTGATTATGACATTGATGCCGAAATACGTACTCTAGAGCTTCTCAAGATTCATTTTGGG
GAAAGCAGTATGCAGAAATGTGAAATAATGCTTAATGATTTGATCGACTCAAAGAGGACA
AATACAAATATAAAAGCAACTATCAAGCATCAACCACAGCCAGAGCAAAGGGACCTTGAT
GTATCTCTAGACAATCTTAATGCTACCATCATATCTTCAAATTTCTGGCCTCCTATTCAG
GATGAGGCAGTCAACTTACCAGAGTCTGTGGAGCAGCTACTGACTGATTATGCAAAAAGG
TATACTGAAGTCAAGACACCACGTAAGCTAATATGGAAGAAAAATCTGGGCAGTGTAAAG
TTGGAGCTCCAATTCGAAGATAGAGCAATGCAGTTTAATGTTACTCCTTTGCATGCTTCA
ATTATTATGCAGTTTCAAGATCAGAAAAAGTGGATATCTAAGAATCTTGCAGCTGCAGTT
GGAGTACCTGTTGATGTGTTGAATAGGAGGATAAATTTTTGGTTAAGCAAGGGAGTTCTG
GCAGAGTCAATGGGGGCAGACTCTGCTGATCATGCTTTTACTCTGGTGGAAACCATGAAT
GATACTGGTAAAAGTGGAACTATTGATGGAGGCTGTGAGGAGCTATTGGCAGGTGAGGAC
GACGGAGAACGCTCTGTGGCCTCTGTTGAAGATCAACTGCGAAAAGAGATGACTGTCTAT
GAGAAATTTATCACTGGGATGCTTACCAATTTTGGCAGCATGGCATTGGATCGTATTCAT
AATACGCTCAAGATGTTCTGCATTGCTGATCCTACATATGACAAATCACTGCAACAACTG
CAAAGCTTCTTATCTGGTTTAGTTGCCGAGGAGAAGTTGGAATTCAGAGATGGAATGTAC
TTTCTGAAAAAGTGA