Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047443
CDS Infomation

pacid=37444264 polypeptide=PGSC0003DMP400032122 locus=PGSC0003DMG400018436 ID=PGSC0003DMT400047443.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAGAAGAAGATAGAATACAAAATCTCAGATCCAAAGCCACAGAGCTTTTACTC
AGAAAAGAATGGAAAGACTCCATTGAAGTTTACTCTGAGTTAATCTCCCTTTGCCATGAC
CAAATCTCAAACCCCCATCAAAATCTTGATCCAAACAACCTCCCAAAACTAAAAAAATCC
CTCTGTTTAGCTCTCTGTAATCGCGCTGAAGCTCGATTAAATCTTCAAGATTATCCTCAA
GCTTTACAGGATTGTAATGAAGCTTCCCAAATTGGAAACACCCATTTCAAGACTCTTCTT
TGTAAAGGTAAGATTTTGCTTAGTCTCAATCAATATGGGTTGGCCTTAGATTGTTTTAAA
AAAGCAAGTCTTGATCCCAATGAGTTAGAAAACTCTGAAATGCTTGATGGGTATTTAGAA
AAGTGTAAAAAGTTTGAATTTTTATCAAGAACTGGTGCTTTTGATATCTCTGATTGGGTA
CTTAATAAGTTTCAAGGAAAACCACCTGAGCTAGCTGAGTACATTGGTTCAATTGAGATT
AAGAAATCGGATATCAGTGGGCGTGGATTGTTCGCAACAAAGAATCTTGATTGTGGGAAC
TTGTTGTTAGTTACTAAGGCTGTTGCTGTTGAAAGAGCTATAGTACCTGAATCTGTTTTT
CAAGATTCTAAGGAACAAGCTCAGTTGGATATGTGGAAGAATTTCATTGATAAAATCTTG
GAATCTATCAAGAAATGTGTACGAACGCGTGATTTGATTTGTAAGCTATCAAATGGTGAG
AATGAGGATGATTTGGAGGTTCCTGACATTGATCTATTTAGGCCTGAGGGAGAAGATAGT
AGTACATTTCATGATAAGAAGATTGACAAGGAAAAATTGCTTAACATTCTTGATGTGAAT
TCTCTTGTTGAGGAGTTGATTTCCGCGAAAGTTCTTGGCAAAAACAGTGATGTCCATGGG
ATTGGACTTTGGGTTTTGTCTTCATTTATCAACCATTCATGTGATCCCAACGTGAGGCGT
TCCCACGTTGGTGATCACGTGATGATTCATGCTTGTAGAGACATAAAAGCAGGCGAAGAG
CTCACATTCGCGTATTTTGATGTGTTTACACCCTTTAGAGACCGTGAAGACAAGGCAAAA
AACTGGGGCTTTGTTTGTAAATGCAAAAGGTGCAATCTTGAAAAGGGTGTTTGTTCAAAT
CAAGAAATGATGGAAATTGAGATGTTTCTTGGTAAAGGACTAGACAATGGAGGTGTAGTT
TATAGATTGGAGGAAAATATGAGGAGATGGATGGTAAGGGGAAAAGGGAAAGGGTATTTG
AGATCGTCATTTTGGCGCGTGTATTCAGAAGTTTACGAGTCAGAAAGATCGTTGAGGAAA
TGGGGAAGTAAAGTTCCATTGATGGAAAATGTGTTGGATAGTGTTGTGGATGCAGTGGGA
AGTGATGAGAGAATTGTGAAGTTGTTGATGAAAGGGTTGAAGAGAAAAAATGGACATAAA
GGGAATGGGATTGTAGAGATGGAAAAAGCAATGAAATTGGGAAGAGGATTGTATGGTAAG
ATAATGAAGAAACAAACATTGAGGACTATACTAATGCAGCTTGGTAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400032122
PEP Infomation

pacid=37444264 transcript=PGSC0003DMT400047443 locus=PGSC0003DMG400018436 ID=PGSC0003DMT400047443.v4.03 annot-version=v4.03
Sequence

MEEEEDRIQNLRSKATELLLRKEWKDSIEVYSELISLCHDQISNPHQNLDPNNLPKLKKS
LCLALCNRAEARLNLQDYPQALQDCNEASQIGNTHFKTLLCKGKILLSLNQYGLALDCFK
KASLDPNELENSEMLDGYLEKCKKFEFLSRTGAFDISDWVLNKFQGKPPELAEYIGSIEI
KKSDISGRGLFATKNLDCGNLLLVTKAVAVERAIVPESVFQDSKEQAQLDMWKNFIDKIL
ESIKKCVRTRDLICKLSNGENEDDLEVPDIDLFRPEGEDSSTFHDKKIDKEKLLNILDVN
SLVEELISAKVLGKNSDVHGIGLWVLSSFINHSCDPNVRRSHVGDHVMIHACRDIKAGEE
LTFAYFDVFTPFRDREDKAKNWGFVCKCKRCNLEKGVCSNQEMMEIEMFLGKGLDNGGVV
YRLEENMRRWMVRGKGKGYLRSSFWRVYSEVYESERSLRKWGSKVPLMENVLDSVVDAVG
SDERIVKLLMKGLKRKNGHKGNGIVEMEKAMKLGRGLYGKIMKKQTLRTILMQLGN*

Transcript Sequence

Transcript ID

PGSC0003DMT400047443
Transcript Infomation

pacid=37444264 locus=PGSC0003DMG400018436 ID=PGSC0003DMT400047443.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAGAAGAAGATAGAATACAAAATCTCAGATCCAAAGCCACAGAGCTTTTACTC
AGAAAAGAATGGAAAGACTCCATTGAAGTTTACTCTGAGTTAATCTCCCTTTGCCATGAC
CAAATCTCAAACCCCCATCAAAATCTTGATCCAAACAACCTCCCAAAACTAAAAAAATCC
CTCTGTTTAGCTCTCTGTAATCGCGCTGAAGCTCGATTAAATCTTCAAGATTATCCTCAA
GCTTTACAGGATTGTAATGAAGCTTCCCAAATTGGAAACACCCATTTCAAGACTCTTCTT
TGTAAAGGTAAGATTTTGCTTAGTCTCAATCAATATGGGTTGGCCTTAGATTGTTTTAAA
AAAGCAAGTCTTGATCCCAATGAGTTAGAAAACTCTGAAATGCTTGATGGGTATTTAGAA
AAGTGTAAAAAGTTTGAATTTTTATCAAGAACTGGTGCTTTTGATATCTCTGATTGGGTA
CTTAATAAGTTTCAAGGAAAACCACCTGAGCTAGCTGAGTACATTGGTTCAATTGAGATT
AAGAAATCGGATATCAGTGGGCGTGGATTGTTCGCAACAAAGAATCTTGATTGTGGGAAC
TTGTTGTTAGTTACTAAGGCTGTTGCTGTTGAAAGAGCTATAGTACCTGAATCTGTTTTT
CAAGATTCTAAGGAACAAGCTCAGTTGGATATGTGGAAGAATTTCATTGATAAAATCTTG
GAATCTATCAAGAAATGTGTACGAACGCGTGATTTGATTTGTAAGCTATCAAATGGTGAG
AATGAGGATGATTTGGAGGTTCCTGACATTGATCTATTTAGGCCTGAGGGAGAAGATAGT
AGTACATTTCATGATAAGAAGATTGACAAGGAAAAATTGCTTAACATTCTTGATGTGAAT
TCTCTTGTTGAGGAGTTGATTTCCGCGAAAGTTCTTGGCAAAAACAGTGATGTCCATGGG
ATTGGACTTTGGGTTTTGTCTTCATTTATCAACCATTCATGTGATCCCAACGTGAGGCGT
TCCCACGTTGGTGATCACGTGATGATTCATGCTTGTAGAGACATAAAAGCAGGCGAAGAG
CTCACATTCGCGTATTTTGATGTGTTTACACCCTTTAGAGACCGTGAAGACAAGGCAAAA
AACTGGGGCTTTGTTTGTAAATGCAAAAGGTGCAATCTTGAAAAGGGTGTTTGTTCAAAT
CAAGAAATGATGGAAATTGAGATGTTTCTTGGTAAAGGACTAGACAATGGAGGTGTAGTT
TATAGATTGGAGGAAAATATGAGGAGATGGATGGTAAGGGGAAAAGGGAAAGGGTATTTG
AGATCGTCATTTTGGCGCGTGTATTCAGAAGTTTACGAGTCAGAAAGATCGTTGAGGAAA
TGGGGAAGTAAAGTTCCATTGATGGAAAATGTGTTGGATAGTGTTGTGGATGCAGTGGGA
AGTGATGAGAGAATTGTGAAGTTGTTGATGAAAGGGTTGAAGAGAAAAAATGGACATAAA
GGGAATGGGATTGTAGAGATGGAAAAAGCAATGAAATTGGGAAGAGGATTGTATGGTAAG
ATAATGAAGAAACAAACATTGAGGACTATACTAATGCAGCTTGGTAACTAA