Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047375
CDS Infomation

pacid=37445408 polypeptide=PGSC0003DMP400032074 locus=PGSC0003DMG400018409 ID=PGSC0003DMT400047375.v4.03 annot-version=v4.03
Sequence

ATGGCAGGCCAGAGGAACAACTACGGTAAGAGAATGCAATCGGAATCTGACTATTCAAGG
AGTGATGGAAGTAAGAGAAGGACTCCAACTGATGAAAAGGAATCAAATTCCATTGGACCA
GAGGATACTGTTTTTCGTTATTTATGCCCCACAGGAAAAATTGGAAGTATCATTGGAGTT
GGTGGGGACATTGCAAAACAACTGAGGACAGAAACTAATTCAAAGATTAGGATTAGCGAG
ACCATACCTGGCTGCGAGGAGCGTGTGGTAACTATTTATAGTGGAAGTGAAGAAACTAAT
GTCTCTGAAGATACTGGTGACCTGATTTCACCTGCTCAAGATGCTCTATTCAGGGTGCAT
GACAGAGTCCTTGCTGAAGACCTGCGTATGGACGAAGATCTGGAGGATCATCAGCAGATT
ACTGTAAGGATGCTTGTCCCATCAGATCAGATAGGTTGTGTGATAGGGAAAGGTGGACTA
GTGATCCAGAATTTACGAAGTGAAACAGGTGCGCAGATTCGGGTGTTAAGCAGTGAGCAC
TTGCCCCCTTGTGCTCTAAACTCGGATGAGCTTCTCCAGATAACCGGTGAAGGTGCAGTT
GTTAAGAAAGCACTTTATCAAGTAGCAGCACGCCTCCATGATAATCCATCACGGTCCCAA
CATCAATTGCTGTCGTCACCCAGCATATTTAGGTCTGGTGCTGGACTTGTTAATCCTCAT
GCTGGTACACAAGTCATGGGTGTGACATCATTGATGGGTCCTTACGCAAGTTACAAAAGT
GATGGTAGAAGTAGATCTTCTTCTGTAAAAGAGTTTGCAGTTCGTTTGGTTTGTCCAACT
GAGAATGTAGGAGCTGTAATTGGCAAAGGTGGAGGCATTATCAAACAGCTAAGACAGGAA
TCAGGTGCATCTATTAAAGTCGATAGTGCTGCAGCTGAGGGAGATGATTGCATTATATTT
GTATCAGCAAAGGAGGCATTTGAAGATCAATCCCCTACCATCGATGCAACAATGCGTTTG
CAACCGAGAAGTAGTGAGAAAACTGAAAAAGAATCCGGTGATGCTATTCTTACGACTCGC
CTGCTTGTACCTAGTTCACGAGTTGGATGCCTTATTGGTAAAGGTGGTTCCATTATCAAT
GAGATGCGGAATTCCACAAGGGCAAGCATCCGCGTTCTTTCGAAGGAAAATCTTCCCAAA
GTGGCATCCGAAGATGACGAGATGGTGCAGATTACTGGAGATGCTAATGTTGCTGCCAAT
GCGTTATTGCAAGTACTTATGCGTTTGAGGGCCAATACATTTGAGATGGAGGGATCTTTT
CCTGCATTTTCTCCTGGCCTTTCTTATGTCCCCATGTCTGCAAGCATGCCAGATGGCTCA
AGATATGGTAACCGTGATAATAGATCACGTCGGCATGGTTATTCATCTTATTCAGGTGGA
CATGATTACAATGATTTGTCTCCAAGTGATAATTATGGTGGCTCACAGGTAAATACTCAG
TGTTCATCTCTTAGAAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400032074
PEP Infomation

pacid=37445408 transcript=PGSC0003DMT400047375 locus=PGSC0003DMG400018409 ID=PGSC0003DMT400047375.v4.03 annot-version=v4.03
Sequence

MAGQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGV
GGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRVH
DRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGLVIQNLRSETGAQIRVLSSEH
LPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQLLSSPSIFRSGAGLVNPH
AGTQVMGVTSLMGPYASYKSDGRSRSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQE
SGASIKVDSAAAEGDDCIIFVSAKEAFEDQSPTIDATMRLQPRSSEKTEKESGDAILTTR
LLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVAAN
ALLQVLMRLRANTFEMEGSFPAFSPGLSYVPMSASMPDGSRYGNRDNRSRRHGYSSYSGG
HDYNDLSPSDNYGGSQVNTQCSSLRS*

Transcript Sequence

Transcript ID

PGSC0003DMT400047375
Transcript Infomation

pacid=37445408 locus=PGSC0003DMG400018409 ID=PGSC0003DMT400047375.v4.03 annot-version=v4.03
Sequence

ATGGCAGGCCAGAGGAACAACTACGGTAAGAGAATGCAATCGGAATCTGACTATTCAAGG
AGTGATGGAAGTAAGAGAAGGACTCCAACTGATGAAAAGGAATCAAATTCCATTGGACCA
GAGGATACTGTTTTTCGTTATTTATGCCCCACAGGAAAAATTGGAAGTATCATTGGAGTT
GGTGGGGACATTGCAAAACAACTGAGGACAGAAACTAATTCAAAGATTAGGATTAGCGAG
ACCATACCTGGCTGCGAGGAGCGTGTGGTAACTATTTATAGTGGAAGTGAAGAAACTAAT
GTCTCTGAAGATACTGGTGACCTGATTTCACCTGCTCAAGATGCTCTATTCAGGGTGCAT
GACAGAGTCCTTGCTGAAGACCTGCGTATGGACGAAGATCTGGAGGATCATCAGCAGATT
ACTGTAAGGATGCTTGTCCCATCAGATCAGATAGGTTGTGTGATAGGGAAAGGTGGACTA
GTGATCCAGAATTTACGAAGTGAAACAGGTGCGCAGATTCGGGTGTTAAGCAGTGAGCAC
TTGCCCCCTTGTGCTCTAAACTCGGATGAGCTTCTCCAGATAACCGGTGAAGGTGCAGTT
GTTAAGAAAGCACTTTATCAAGTAGCAGCACGCCTCCATGATAATCCATCACGGTCCCAA
CATCAATTGCTGTCGTCACCCAGCATATTTAGGTCTGGTGCTGGACTTGTTAATCCTCAT
GCTGGTACACAAGTCATGGGTGTGACATCATTGATGGGTCCTTACGCAAGTTACAAAAGT
GATGGTAGAAGTAGATCTTCTTCTGTAAAAGAGTTTGCAGTTCGTTTGGTTTGTCCAACT
GAGAATGTAGGAGCTGTAATTGGCAAAGGTGGAGGCATTATCAAACAGCTAAGACAGGAA
TCAGGTGCATCTATTAAAGTCGATAGTGCTGCAGCTGAGGGAGATGATTGCATTATATTT
GTATCAGCAAAGGAGGCATTTGAAGATCAATCCCCTACCATCGATGCAACAATGCGTTTG
CAACCGAGAAGTAGTGAGAAAACTGAAAAAGAATCCGGTGATGCTATTCTTACGACTCGC
CTGCTTGTACCTAGTTCACGAGTTGGATGCCTTATTGGTAAAGGTGGTTCCATTATCAAT
GAGATGCGGAATTCCACAAGGGCAAGCATCCGCGTTCTTTCGAAGGAAAATCTTCCCAAA
GTGGCATCCGAAGATGACGAGATGGTGCAGATTACTGGAGATGCTAATGTTGCTGCCAAT
GCGTTATTGCAAGTACTTATGCGTTTGAGGGCCAATACATTTGAGATGGAGGGATCTTTT
CCTGCATTTTCTCCTGGCCTTTCTTATGTCCCCATGTCTGCAAGCATGCCAGATGGCTCA
AGATATGGTAACCGTGATAATAGATCACGTCGGCATGGTTATTCATCTTATTCAGGTGGA
CATGATTACAATGATTTGTCTCCAAGTGATAATTATGGTGGCTCACAGGTAAATACTCAG
TGTTCATCTCTTAGAAGTTAG