Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047365
CDS Infomation

pacid=37444222 polypeptide=PGSC0003DMP400032066 locus=PGSC0003DMG400018405 ID=PGSC0003DMT400047365.v4.03 annot-version=v4.03
Sequence

ATGAAGAAATGGTACGGTGGTGTTTTAACTACATCCCTGTTGATGTTTTTGGTCCTGGGA
TACTGTGTGATGAGGAAACCTGTCAAGGAAAGCTATGTTACAAGTTCTCTCTACTTCAAT
ATGACAAATCCCCTTGAATGGATAAATGCTATGGCTCCACCTGCAGCTCACCATCCAGAA
AAAAATAATCAAGTAATACCTGCTGAAATTGTTGTCTCTGATCTCTTTATCAAGAGGAAC
CTGTCAGCTCAGGAGCAACAATCTTTGTCTACGTGGTATCAATTGAAAAGGTTAATCACT
CATGATCTAGTTTTACCTAATGCTATAGAGGCGGTTAAGGAAGCCACTGTTGCATGGAAC
AACCTCATGAGTGCAGTAGAGATGGACAAACTCGATACAAATGATAGTTCAATTAAGACA
GGGAAACAGAAACAATGTCCTCATTTTCTTAGCAAAACCAATGCTACAGAACTTGATGCT
AGCGGCTTTAAGTTGCGGCTTCCTTGTGGTCTGACTCAGGGTTCTTCCATCACAATAATT
GGCATTCCAAATGGTCTTCTTGGGAATTTTCGGATAGATTTGACTGGTGAACCACTACCA
GGTGAACCAGACCCTCCTGTTATTCTGCACTACAATGTTAGGCTCCATGGTGATAAAATA
ACCGAGGATCCTGTAATCGTACAAAACACCTGGACTATTGCACATGACTGGGGTGAAGAG
GAGCGCTGTCCATTACCATCAGATGAAAAGAGTAAGAAAGTGGATGAATTGGATCAATGC
AATGGGATGGTGGGCAATGTCACGTCCACTCGGCATGTCATTGCAACAAATAAATCTAGC
ATGGTTCAGGACGGGGCTAAATCAAGAAAATATTTTCCTTTCAAGCAAGGATATCTCTCA
GTTGCCACTCTGAGAGTAGGATCTGAAGGAATTCAGATGACAGTTGATGGAAGGCACATA
ACATCTTTTGCTTTCCGTGAAACTTTGGAACCATGGCTCATAAGTGAAGTGAGGATATCG
GGAGACATAAAATTAATTTCTGTTGTTGCAAGTGGTTTACCAACATCAGAGGATGCAGAG
CATATAAGCGACTTGGAAGCCTTAAAAGCAGCTCCTCTTCCTCCACGAAAAAGACTAGAT
CTCTTTATTGGTGTATTTTCTACCACAAATAATTTTAAGCGTAGAATGGCTGTCCGTAGA
ACGTGGATGCAATATGATGCAGTGCGGTCTGGACAAGTTGCAGTGCGGTTTTTTGTTGGC
TTGCATAAAAACCAAATGGTGAATGAAGAGCTCTGGAATGAGGCTCGGACATATAGAGAC
ATCCAGCTGATGCCTTTTGTTGATTACTACAGTCTTATCACTTGGAAAACCATTGCCATC
TGTGTTTTTGGGACGGAGGTTGTTTCTGCAAAGTTTGTCATGAAGACAGACGATGATGCA
TTTGTTCGAGTGGATGAAATCTTATCTTCTATGGAGAGGGTTGACACGACTCGTGGATTG
TTATATGGCCTTATTAACGCAGATTCCCAACCTCATAGGAGCCCGGACAGCAAGTGGTTT
ATCAGTCCAGAGGAATGGCCTGAAGAAACTTACCCTCCTTGGGCACATGGACCGGGTTAT
GTCGTCTCCAGCGATATAGCAAAAACAATCAGTTCGAAACAGAGAAAAGGCCGCCTAAAG
ATGTTTAAGCTTGAAGATGTTGCTATGGGCATCTGGATTTCAGAAATGAAGAAAAAAGGG
TTGGAAGTGAAGTATGAAAAGGAAGAGAGGATTTTTAATGAAGGTTGCCGGGATGGTTAT
GTAATTGCACATTACCAAAGCCCTAGAGAGATGCTGTGTCTTTGGCAAAAGATTGAAGAG
AAAAAACGAGCTTTATGTTGTGGCGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400032066
PEP Infomation

pacid=37444222 transcript=PGSC0003DMT400047365 locus=PGSC0003DMG400018405 ID=PGSC0003DMT400047365.v4.03 annot-version=v4.03
Sequence

MKKWYGGVLTTSLLMFLVLGYCVMRKPVKESYVTSSLYFNMTNPLEWINAMAPPAAHHPE
KNNQVIPAEIVVSDLFIKRNLSAQEQQSLSTWYQLKRLITHDLVLPNAIEAVKEATVAWN
NLMSAVEMDKLDTNDSSIKTGKQKQCPHFLSKTNATELDASGFKLRLPCGLTQGSSITII
GIPNGLLGNFRIDLTGEPLPGEPDPPVILHYNVRLHGDKITEDPVIVQNTWTIAHDWGEE
ERCPLPSDEKSKKVDELDQCNGMVGNVTSTRHVIATNKSSMVQDGAKSRKYFPFKQGYLS
VATLRVGSEGIQMTVDGRHITSFAFRETLEPWLISEVRISGDIKLISVVASGLPTSEDAE
HISDLEALKAAPLPPRKRLDLFIGVFSTTNNFKRRMAVRRTWMQYDAVRSGQVAVRFFVG
LHKNQMVNEELWNEARTYRDIQLMPFVDYYSLITWKTIAICVFGTEVVSAKFVMKTDDDA
FVRVDEILSSMERVDTTRGLLYGLINADSQPHRSPDSKWFISPEEWPEETYPPWAHGPGY
VVSSDIAKTISSKQRKGRLKMFKLEDVAMGIWISEMKKKGLEVKYEKEERIFNEGCRDGY
VIAHYQSPREMLCLWQKIEEKKRALCCGD*

Transcript Sequence

Transcript ID

PGSC0003DMT400047365
Transcript Infomation

pacid=37444222 locus=PGSC0003DMG400018405 ID=PGSC0003DMT400047365.v4.03 annot-version=v4.03
Sequence

ATGAAGAAATGGTACGGTGGTGTTTTAACTACATCCCTGTTGATGTTTTTGGTCCTGGGA
TACTGTGTGATGAGGAAACCTGTCAAGGAAAGCTATGTTACAAGTTCTCTCTACTTCAAT
ATGACAAATCCCCTTGAATGGATAAATGCTATGGCTCCACCTGCAGCTCACCATCCAGAA
AAAAATAATCAAGTAATACCTGCTGAAATTGTTGTCTCTGATCTCTTTATCAAGAGGAAC
CTGTCAGCTCAGGAGCAACAATCTTTGTCTACGTGGTATCAATTGAAAAGGTTAATCACT
CATGATCTAGTTTTACCTAATGCTATAGAGGCGGTTAAGGAAGCCACTGTTGCATGGAAC
AACCTCATGAGTGCAGTAGAGATGGACAAACTCGATACAAATGATAGTTCAATTAAGACA
GGGAAACAGAAACAATGTCCTCATTTTCTTAGCAAAACCAATGCTACAGAACTTGATGCT
AGCGGCTTTAAGTTGCGGCTTCCTTGTGGTCTGACTCAGGGTTCTTCCATCACAATAATT
GGCATTCCAAATGGTCTTCTTGGGAATTTTCGGATAGATTTGACTGGTGAACCACTACCA
GGTGAACCAGACCCTCCTGTTATTCTGCACTACAATGTTAGGCTCCATGGTGATAAAATA
ACCGAGGATCCTGTAATCGTACAAAACACCTGGACTATTGCACATGACTGGGGTGAAGAG
GAGCGCTGTCCATTACCATCAGATGAAAAGAGTAAGAAAGTGGATGAATTGGATCAATGC
AATGGGATGGTGGGCAATGTCACGTCCACTCGGCATGTCATTGCAACAAATAAATCTAGC
ATGGTTCAGGACGGGGCTAAATCAAGAAAATATTTTCCTTTCAAGCAAGGATATCTCTCA
GTTGCCACTCTGAGAGTAGGATCTGAAGGAATTCAGATGACAGTTGATGGAAGGCACATA
ACATCTTTTGCTTTCCGTGAAACTTTGGAACCATGGCTCATAAGTGAAGTGAGGATATCG
GGAGACATAAAATTAATTTCTGTTGTTGCAAGTGGTTTACCAACATCAGAGGATGCAGAG
CATATAAGCGACTTGGAAGCCTTAAAAGCAGCTCCTCTTCCTCCACGAAAAAGACTAGAT
CTCTTTATTGGTGTATTTTCTACCACAAATAATTTTAAGCGTAGAATGGCTGTCCGTAGA
ACGTGGATGCAATATGATGCAGTGCGGTCTGGACAAGTTGCAGTGCGGTTTTTTGTTGGC
TTGCATAAAAACCAAATGGTGAATGAAGAGCTCTGGAATGAGGCTCGGACATATAGAGAC
ATCCAGCTGATGCCTTTTGTTGATTACTACAGTCTTATCACTTGGAAAACCATTGCCATC
TGTGTTTTTGGGACGGAGGTTGTTTCTGCAAAGTTTGTCATGAAGACAGACGATGATGCA
TTTGTTCGAGTGGATGAAATCTTATCTTCTATGGAGAGGGTTGACACGACTCGTGGATTG
TTATATGGCCTTATTAACGCAGATTCCCAACCTCATAGGAGCCCGGACAGCAAGTGGTTT
ATCAGTCCAGAGGAATGGCCTGAAGAAACTTACCCTCCTTGGGCACATGGACCGGGTTAT
GTCGTCTCCAGCGATATAGCAAAAACAATCAGTTCGAAACAGAGAAAAGGCCGCCTAAAG
ATGTTTAAGCTTGAAGATGTTGCTATGGGCATCTGGATTTCAGAAATGAAGAAAAAAGGG
TTGGAAGTGAAGTATGAAAAGGAAGAGAGGATTTTTAATGAAGGTTGCCGGGATGGTTAT
GTAATTGCACATTACCAAAGCCCTAGAGAGATGCTGTGTCTTTGGCAAAAGATTGAAGAG
AAAAAACGAGCTTTATGTTGTGGCGATTAA