Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047359
CDS Infomation

pacid=37443052 polypeptide=PGSC0003DMP400032060 locus=PGSC0003DMG400018403 ID=PGSC0003DMT400047359.v4.03 annot-version=v4.03
Sequence

ATGCACGCTTATAATAGACTACCGAGTAGTGGACACAGTAGCCCATCAACGCCGTCATCG
CCACGTTCACGGTCGCCTCGTTTACGTAGCAGTAGTAATAGTGGTGGTGGAGGTGGAGGT
AGTGGTGGTGGAAGGGTTAAACCCAGTGCCCGTTTTACTTCGGGTCAACAGCCACCGAGA
ACCCTAGCAAATCGTATAACTGGGGCTATTCTATCTGTTCTGGTTCGTCGTCAGGGGATT
TTCCTATTTGCTCCTTTGCTTTATATTGCTGGGATATTGTTTTATATGGGGACAGTACCG
TTTGATGTTGTTCCTATTATCAGGCACCGTCCTGCTCCTGGGTCTGTTTACCGGAGCCCT
CAACTCTATGATAAGCTTCGACCTGAAATGAACTCTGATAATTCCACTGCTGATGCGATA
TCAACAATTTGGAAAAACTCCTATAGAGGTGGTGAATGGAGACCATGCATTAACAAATCC
TCAGGAGAAATTCCTGAATCAAATGGTTACCTTTATATTGAGGCAAATGGTGGTCTGAAT
CAGCAAAGGACATCGATATGCAATGCTGTTGCTGTGGCAGGTTTTCTTAATGCAACCCTG
GTCATCCCACACTTCCATTTTCATAGCATTTGGAGGGATCCAAGCAAGTTCGGAGAGATT
TATGATGAAGATTTTTTTGTTAAAACCCTAGCCAATGATGTGCGAGTGGTGGACAAGATT
CCTGATTATATTATGCAAAGGTTCGGTTACAATATGAGCAATGTTTACAACTTCAAGATC
AAAGCTTGGTCCTCCATCAGTTACTACAGGGATACAGTTCATCCAAAGCTGCTTGAAGAA
AAGCTCATCAGAATATCCCCATTTGCAAACCGTTTATCATTTGATGCTCCTCCAGCAGTT
CAGCAGCTTAGGTGCCTGGCAAATTATGAAGCCCTTAGATTTTCAAATCCCATTTTGAGT
TTGGGGGAAACATTGGTGTCAAGAATGAAAGAACGAAGTGCCAACAATAGTGGAAAGTAT
ATTTCTGTGCATCTCCGCTATGAGGAGGATATGGTGGCTTTCTCTTGTTGCATGTATGAT
GGTGGTGGAGAAGAAAAAAGGGACATGGATGCTGCAAGAGAGAGAGGATGGAAGGGAAAA
TTTACAAAACCTGGTCGTGTGATTCGTCCTGGAGCAATCAGGATTAATGGCAAGTGTCCC
TTGACTCCTTTAGAGGTTGGTTTGATGTTAAGAGGCATGGGATTTGACAAGGTTACATCC
ATCTATTTAGCATCTGGAAAAATATACGACTCTGAGCGACATATGAAACCACTATTAGAA
ATGTTTCCTCTTTTACAAACTAAAGAAATGCTGGCATCCCCAGAAGAATTAGGCCCATTT
CAGAATTACTCTTCCAGGATGGCTGCCATAGACTATACTGTTTGCCTTCATAGTGAAGTA
TTCGTGACAACTCAGGGAGGCAATTTCCCCCACTTTCTGTTGGGGCATAGAAGATACTTA
TATGGCGGGCACTCCAGGACCATCAGGCCAGACAAGAGAAAGTTAGCTTTGTTATATGAT
AATCCCAATATCGGGTGGAAGAGCTTCAAGCGGCAAATGCTTAGTATACGAGCACATAGT
GATTCAAAAGGAATTGAGATTAAAAGACCAAATGACTCAATATATTCATTCCCTTGCCCA
GATTGCATGTGTCGGAGTAACAGGACTGAGGATTCTAGATCCTCCTCAGTAACGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400032060
PEP Infomation

pacid=37443052 transcript=PGSC0003DMT400047359 locus=PGSC0003DMG400018403 ID=PGSC0003DMT400047359.v4.03 annot-version=v4.03
Sequence

MHAYNRLPSSGHSSPSTPSSPRSRSPRLRSSSNSGGGGGGSGGGRVKPSARFTSGQQPPR
TLANRITGAILSVLVRRQGIFLFAPLLYIAGILFYMGTVPFDVVPIIRHRPAPGSVYRSP
QLYDKLRPEMNSDNSTADAISTIWKNSYRGGEWRPCINKSSGEIPESNGYLYIEANGGLN
QQRTSICNAVAVAGFLNATLVIPHFHFHSIWRDPSKFGEIYDEDFFVKTLANDVRVVDKI
PDYIMQRFGYNMSNVYNFKIKAWSSISYYRDTVHPKLLEEKLIRISPFANRLSFDAPPAV
QQLRCLANYEALRFSNPILSLGETLVSRMKERSANNSGKYISVHLRYEEDMVAFSCCMYD
GGGEEKRDMDAARERGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKVTS
IYLASGKIYDSERHMKPLLEMFPLLQTKEMLASPEELGPFQNYSSRMAAIDYTVCLHSEV
FVTTQGGNFPHFLLGHRRYLYGGHSRTIRPDKRKLALLYDNPNIGWKSFKRQMLSIRAHS
DSKGIEIKRPNDSIYSFPCPDCMCRSNRTEDSRSSSVT*

Transcript Sequence

Transcript ID

PGSC0003DMT400047359
Transcript Infomation

pacid=37443052 locus=PGSC0003DMG400018403 ID=PGSC0003DMT400047359.v4.03 annot-version=v4.03
Sequence

ATGCACGCTTATAATAGACTACCGAGTAGTGGACACAGTAGCCCATCAACGCCGTCATCG
CCACGTTCACGGTCGCCTCGTTTACGTAGCAGTAGTAATAGTGGTGGTGGAGGTGGAGGT
AGTGGTGGTGGAAGGGTTAAACCCAGTGCCCGTTTTACTTCGGGTCAACAGCCACCGAGA
ACCCTAGCAAATCGTATAACTGGGGCTATTCTATCTGTTCTGGTTCGTCGTCAGGGGATT
TTCCTATTTGCTCCTTTGCTTTATATTGCTGGGATATTGTTTTATATGGGGACAGTACCG
TTTGATGTTGTTCCTATTATCAGGCACCGTCCTGCTCCTGGGTCTGTTTACCGGAGCCCT
CAACTCTATGATAAGCTTCGACCTGAAATGAACTCTGATAATTCCACTGCTGATGCGATA
TCAACAATTTGGAAAAACTCCTATAGAGGTGGTGAATGGAGACCATGCATTAACAAATCC
TCAGGAGAAATTCCTGAATCAAATGGTTACCTTTATATTGAGGCAAATGGTGGTCTGAAT
CAGCAAAGGACATCGATATGCAATGCTGTTGCTGTGGCAGGTTTTCTTAATGCAACCCTG
GTCATCCCACACTTCCATTTTCATAGCATTTGGAGGGATCCAAGCAAGTTCGGAGAGATT
TATGATGAAGATTTTTTTGTTAAAACCCTAGCCAATGATGTGCGAGTGGTGGACAAGATT
CCTGATTATATTATGCAAAGGTTCGGTTACAATATGAGCAATGTTTACAACTTCAAGATC
AAAGCTTGGTCCTCCATCAGTTACTACAGGGATACAGTTCATCCAAAGCTGCTTGAAGAA
AAGCTCATCAGAATATCCCCATTTGCAAACCGTTTATCATTTGATGCTCCTCCAGCAGTT
CAGCAGCTTAGGTGCCTGGCAAATTATGAAGCCCTTAGATTTTCAAATCCCATTTTGAGT
TTGGGGGAAACATTGGTGTCAAGAATGAAAGAACGAAGTGCCAACAATAGTGGAAAGTAT
ATTTCTGTGCATCTCCGCTATGAGGAGGATATGGTGGCTTTCTCTTGTTGCATGTATGAT
GGTGGTGGAGAAGAAAAAAGGGACATGGATGCTGCAAGAGAGAGAGGATGGAAGGGAAAA
TTTACAAAACCTGGTCGTGTGATTCGTCCTGGAGCAATCAGGATTAATGGCAAGTGTCCC
TTGACTCCTTTAGAGGTTGGTTTGATGTTAAGAGGCATGGGATTTGACAAGGTTACATCC
ATCTATTTAGCATCTGGAAAAATATACGACTCTGAGCGACATATGAAACCACTATTAGAA
ATGTTTCCTCTTTTACAAACTAAAGAAATGCTGGCATCCCCAGAAGAATTAGGCCCATTT
CAGAATTACTCTTCCAGGATGGCTGCCATAGACTATACTGTTTGCCTTCATAGTGAAGTA
TTCGTGACAACTCAGGGAGGCAATTTCCCCCACTTTCTGTTGGGGCATAGAAGATACTTA
TATGGCGGGCACTCCAGGACCATCAGGCCAGACAAGAGAAAGTTAGCTTTGTTATATGAT
AATCCCAATATCGGGTGGAAGAGCTTCAAGCGGCAAATGCTTAGTATACGAGCACATAGT
GATTCAAAAGGAATTGAGATTAAAAGACCAAATGACTCAATATATTCATTCCCTTGCCCA
GATTGCATGTGTCGGAGTAACAGGACTGAGGATTCTAGATCCTCCTCAGTAACGTGA