Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047304
CDS Infomation

pacid=37433599 polypeptide=PGSC0003DMP400032014 locus=PGSC0003DMG400018371 ID=PGSC0003DMT400047304.v4.03 annot-version=v4.03
Sequence

ATGAGTGTTTTACAATACCCAGAAGGGATTAATCCAGCAGATGTTCAGATATGGAACAAT
GCTGCTTTTGATAATGGCGATTCTGCAGATTTTTCATCACTGAAACGTTCTTGGTTAACG
GATTCCTTTGAATCTGATGTCTCAAGCAAGGAGAATCAGACTCCTTCGTTTGAGAATTCT
TCATCTGTTAATCTGTCAGTTTCGATGCCCTTCAAGCCGCTAAACCCAAATGGGGCTCTG
GAGAATTCAAGACTCAAACTAAACAAGTCTATTTCTAAACAGAGTGTTGATGAGATGAGT
ATGACAAGTAGAAAGAGTGGAAAGGACAGCGATTTCCGCGATGAAAAGAGGATTGATGAG
GAAATTGAAGAAATTGAAATGGAGATTAGTAGATTGAATTCGAAATTAGAGGCATTGAGA
ATTGAAAAGGCGGAAAAAAGTTTCAAGATTGTTGAAAAGAGAGGGAGGGTTGTGCCAGCA
AAGTTTATGGAGCCAAAAATGAGTGTTAAGATTGGAGAGGAGAAGAAAAAGATTGATGAG
AGTTCATCAATGAGTGCAAAAACAAAGGTGCAGACAAGAAGGGGTCTAAGTTTAGGACCA
GCTGAGATTTTCGCTGGAACGCGTAGTCGAGGGTTAAGTATGGGGCCATCAGAGATTTTT
GCAGGGACAAAGGCAGGGAAATTGGGCAAACAGGAAATGATTACACCTGTTCAGCCAATA
CAAAACAGGCGAAAGTCTTGTTTTTGGAAGCTTCAAGAGATTGAAGAAGAAAGGGGAAAA
AGTTCAAGCCTTAGTCCCAAATCAAGAAAAGCTGCAGCAAGAACTACGGCTTCAAGGCAG
GCAGTTACTACAATTGCATCAAAGAAGAATCTGAAGAAGGATGATGCATTTCTGAGTTCA
GTTCAGCCAAAGAAGTTATTCAAAGATGGCGAAAAGTCTGTTGCTGCTAGCAAGAAGCCG
CAGAGGCCAGGGAGGGTTGTGGCTAGTAGGTACAATCAGAGCACAAATCAGTCATCAGTA
GTGAGAAAGAGGTCTTTACCTGAGAATGATAAGGATGAGACTAAGAGAAACGAAAAGAAA
CGATCTTTATCTGTAGGGAAAACGCGTGTATCACAAACAGAAAACAAGAATTTGGGTACT
GAAAGCAGGGTGAAAAAGAGATGGGAAATTCCTAGTGAGATAGTAGTTCATGCTAGCACA
GAAAGTGAAAAATCTCCACTGAGCATTACTGTGAAACCTGATTTGCTTCCTAGAATTAGG
ATTGCTCGGTGCACTGTCAATGAGACTCCTAGGGATTCTGGACCTGCCAAAAGAGTGGTA
GAGTTGATAGGCAAGAAATCATTTTTCAGCAATGATGAAGATAAGGAGCCATCAGTCTGT
CAAGTTCTCAGTTTTGCCGACGAAGATGCTGAAGAGGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400032014
PEP Infomation

pacid=37433599 transcript=PGSC0003DMT400047304 locus=PGSC0003DMG400018371 ID=PGSC0003DMT400047304.v4.03 annot-version=v4.03
Sequence

MSVLQYPEGINPADVQIWNNAAFDNGDSADFSSLKRSWLTDSFESDVSSKENQTPSFENS
SSVNLSVSMPFKPLNPNGALENSRLKLNKSISKQSVDEMSMTSRKSGKDSDFRDEKRIDE
EIEEIEMEISRLNSKLEALRIEKAEKSFKIVEKRGRVVPAKFMEPKMSVKIGEEKKKIDE
SSSMSAKTKVQTRRGLSLGPAEIFAGTRSRGLSMGPSEIFAGTKAGKLGKQEMITPVQPI
QNRRKSCFWKLQEIEEERGKSSSLSPKSRKAAARTTASRQAVTTIASKKNLKKDDAFLSS
VQPKKLFKDGEKSVAASKKPQRPGRVVASRYNQSTNQSSVVRKRSLPENDKDETKRNEKK
RSLSVGKTRVSQTENKNLGTESRVKKRWEIPSEIVVHASTESEKSPLSITVKPDLLPRIR
IARCTVNETPRDSGPAKRVVELIGKKSFFSNDEDKEPSVCQVLSFADEDAEEE*

Transcript Sequence

Transcript ID

PGSC0003DMT400047304
Transcript Infomation

pacid=37433599 locus=PGSC0003DMG400018371 ID=PGSC0003DMT400047304.v4.03 annot-version=v4.03
Sequence

ATGAGTGTTTTACAATACCCAGAAGGGATTAATCCAGCAGATGTTCAGATATGGAACAAT
GCTGCTTTTGATAATGGCGATTCTGCAGATTTTTCATCACTGAAACGTTCTTGGTTAACG
GATTCCTTTGAATCTGATGTCTCAAGCAAGGAGAATCAGACTCCTTCGTTTGAGAATTCT
TCATCTGTTAATCTGTCAGTTTCGATGCCCTTCAAGCCGCTAAACCCAAATGGGGCTCTG
GAGAATTCAAGACTCAAACTAAACAAGTCTATTTCTAAACAGAGTGTTGATGAGATGAGT
ATGACAAGTAGAAAGAGTGGAAAGGACAGCGATTTCCGCGATGAAAAGAGGATTGATGAG
GAAATTGAAGAAATTGAAATGGAGATTAGTAGATTGAATTCGAAATTAGAGGCATTGAGA
ATTGAAAAGGCGGAAAAAAGTTTCAAGATTGTTGAAAAGAGAGGGAGGGTTGTGCCAGCA
AAGTTTATGGAGCCAAAAATGAGTGTTAAGATTGGAGAGGAGAAGAAAAAGATTGATGAG
AGTTCATCAATGAGTGCAAAAACAAAGGTGCAGACAAGAAGGGGTCTAAGTTTAGGACCA
GCTGAGATTTTCGCTGGAACGCGTAGTCGAGGGTTAAGTATGGGGCCATCAGAGATTTTT
GCAGGGACAAAGGCAGGGAAATTGGGCAAACAGGAAATGATTACACCTGTTCAGCCAATA
CAAAACAGGCGAAAGTCTTGTTTTTGGAAGCTTCAAGAGATTGAAGAAGAAAGGGGAAAA
AGTTCAAGCCTTAGTCCCAAATCAAGAAAAGCTGCAGCAAGAACTACGGCTTCAAGGCAG
GCAGTTACTACAATTGCATCAAAGAAGAATCTGAAGAAGGATGATGCATTTCTGAGTTCA
GTTCAGCCAAAGAAGTTATTCAAAGATGGCGAAAAGTCTGTTGCTGCTAGCAAGAAGCCG
CAGAGGCCAGGGAGGGTTGTGGCTAGTAGGTACAATCAGAGCACAAATCAGTCATCAGTA
GTGAGAAAGAGGTCTTTACCTGAGAATGATAAGGATGAGACTAAGAGAAACGAAAAGAAA
CGATCTTTATCTGTAGGGAAAACGCGTGTATCACAAACAGAAAACAAGAATTTGGGTACT
GAAAGCAGGGTGAAAAAGAGATGGGAAATTCCTAGTGAGATAGTAGTTCATGCTAGCACA
GAAAGTGAAAAATCTCCACTGAGCATTACTGTGAAACCTGATTTGCTTCCTAGAATTAGG
ATTGCTCGGTGCACTGTCAATGAGACTCCTAGGGATTCTGGACCTGCCAAAAGAGTGGTA
GAGTTGATAGGCAAGAAATCATTTTTCAGCAATGATGAAGATAAGGAGCCATCAGTCTGT
CAAGTTCTCAGTTTTGCCGACGAAGATGCTGAAGAGGAATAA