Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047292
CDS Infomation

pacid=37431959 polypeptide=PGSC0003DMP400032006 locus=PGSC0003DMG400018366 ID=PGSC0003DMT400047292.v4.03 annot-version=v4.03
Sequence

ATGGCTGGGCGTTACAATGACAATCCTTTTGCTGAAGAAGATGAAGTGAACCCATTTTCG
AATAATGGAAGTGTTCCTGCTGCTACAAACTCGAGGCCTTATCCTCTTCCTCATGAACCT
GCCGGCTATGATCGTGGCGCAACCGTTGATATTCCTCTTGATGGTTCAAAGGACATGAAG
AAGAAAGAGAAAGAACTCCAAGCTAAAGAGGCTGAATTAAAGAAAAGAGAACAGGAACTT
AAAAGGAAGGAGGATGCAATAACAAGAGCTGGTGTAGTGATTGACGACAAGAATTGGCCA
CCTTTCTTCCCCATCATTCATCACGATATCGCAAATGAAATTCCAATTCATCTACAGAAG
CTGCAATATGTTGCATTCACTACATTGTTGGGTCTGGCAGTCTGTCTTGTATGGAACCTT
GTTGCTGTCACCTTAGCTTGGATCAGAGGAGAAGGTCCAACTATCTGGTTGCTTGCTGTT
ATCTACTTAATATCAGGTGTCCCAGGAGCCTATGTATTGTGGTATCGGCCTCTCTATCGT
GCAATGAGGACTGACAGTGCGCTGAAATTTGGGTGGTTTTTCTTAAGTTACGTGTTTCAC
ATTGGATTCTGCATCATTGCTGCTGTGGCACCTCCAATTTTCTTCAAGGGGAAATCTTTG
ACTGGTATCTTGCCTGCAATTGATCTTTTAGGCTGGCATGCTTTGGTTGGGATATTCTAC
TTCATTGGAGCTGGATTCTTCTGTCTTGAAACACTGATGAGCATATGGGTTATACAGCAA
GTCTACATGTATTTCCGGGGAAGTGGAAAGGCTGCAGAGATGAAGAAAGAGGCTGCAAGA
TCGACTATGATGGCTGCACTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400032006
PEP Infomation

pacid=37431959 transcript=PGSC0003DMT400047292 locus=PGSC0003DMG400018366 ID=PGSC0003DMT400047292.v4.03 annot-version=v4.03
Sequence

MAGRYNDNPFAEEDEVNPFSNNGSVPAATNSRPYPLPHEPAGYDRGATVDIPLDGSKDMK
KKEKELQAKEAELKKREQELKRKEDAITRAGVVIDDKNWPPFFPIIHHDIANEIPIHLQK
LQYVAFTTLLGLAVCLVWNLVAVTLAWIRGEGPTIWLLAVIYLISGVPGAYVLWYRPLYR
AMRTDSALKFGWFFLSYVFHIGFCIIAAVAPPIFFKGKSLTGILPAIDLLGWHALVGIFY
FIGAGFFCLETLMSIWVIQQVYMYFRGSGKAAEMKKEAARSTMMAAL*

Transcript Sequence

Transcript ID

PGSC0003DMT400047292
Transcript Infomation

pacid=37431959 locus=PGSC0003DMG400018366 ID=PGSC0003DMT400047292.v4.03 annot-version=v4.03
Sequence

ATGGCTGGGCGTTACAATGACAATCCTTTTGCTGAAGAAGATGAAGTGAACCCATTTTCG
AATAATGGAAGTGTTCCTGCTGCTACAAACTCGAGGCCTTATCCTCTTCCTCATGAACCT
GCCGGCTATGATCGTGGCGCAACCGTTGATATTCCTCTTGATGGTTCAAAGGACATGAAG
AAGAAAGAGAAAGAACTCCAAGCTAAAGAGGCTGAATTAAAGAAAAGAGAACAGGAACTT
AAAAGGAAGGAGGATGCAATAACAAGAGCTGGTGTAGTGATTGACGACAAGAATTGGCCA
CCTTTCTTCCCCATCATTCATCACGATATCGCAAATGAAATTCCAATTCATCTACAGAAG
CTGCAATATGTTGCATTCACTACATTGTTGGGTCTGGCAGTCTGTCTTGTATGGAACCTT
GTTGCTGTCACCTTAGCTTGGATCAGAGGAGAAGGTCCAACTATCTGGTTGCTTGCTGTT
ATCTACTTAATATCAGGTGTCCCAGGAGCCTATGTATTGTGGTATCGGCCTCTCTATCGT
GCAATGAGGACTGACAGTGCGCTGAAATTTGGGTGGTTTTTCTTAAGTTACGTGTTTCAC
ATTGGATTCTGCATCATTGCTGCTGTGGCACCTCCAATTTTCTTCAAGGGGAAATCTTTG
ACTGGTATCTTGCCTGCAATTGATCTTTTAGGCTGGCATGCTTTGGTTGGGATATTCTAC
TTCATTGGAGCTGGATTCTTCTGTCTTGAAACACTGATGAGCATATGGGTTATACAGCAA
GTCTACATGTATTTCCGGGGAAGTGGAAAGGCTGCAGAGATGAAGAAAGAGGCTGCAAGA
TCGACTATGATGGCTGCACTATGA