Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047232
CDS Infomation

pacid=37433168 polypeptide=PGSC0003DMP400031954 locus=PGSC0003DMG400018337 ID=PGSC0003DMT400047232.v4.03 annot-version=v4.03
Sequence

ATGGGTGGTGTTTGTGGAAAACCTTCCGAGCCCGTGCAGAATAGGCGGGATAGACAAAAG
AGGAGTGAATTTACTAAAGGGGCAACTGTGGTATCACGCCCACTACGAGCTGTTTCTACA
AAGAGAGAGGAAAGTTTCAGGGTGAAAGACAAGTTGGAAAATGGTGATGTGAAGCTTGGT
TTGGTAGATAGGAAGTCTAATGGATCAAGAAAGGTCAGGGATGATCATTATGAGCAGATA
AAGGAAAAGCTTGGACTCATTGTGAATGGTTGTCCTGGAAACGGAGTCGTCCCAAAAGCC
TTGGAAGGGGAGCTGATTGCTGCTGGATGGCCTTCTTGGCTTGCTTCAGTGGCTGGTGAA
GCTATTAATGGATGGCTTCCTCGCAAGGGCGATACATTCGAGAGATTAGACAAGATTGGC
CAAGGGACTTATAGTAGTGTATACAAGGCTCGTGACCTAATTAACAATAAACTTGTTGCA
CTCAAAAGAGTGCGGTTTGATAATATGGATATTGAAAGTGTCAAATTTATGGCAAGGGAG
ATAGTCATTTTGCGTAAGCTTGATCATCCAAATATTATCAAATTGGAAGGCTTGGTTGCA
TCAAGATCATCTTGCAGTTTGTACCTTGTTTTTGAGTACATGGAACATGATCTCACTGGA
CTGGCATCTCTTCCTGATAACAAATTTACCGAACCACAGATGAAATGCTATATGCATCAA
CTTCTTAGTGGACTTGATCATTGCCATAGTCGGGGTGTTTTGCATCGGGACATTAAAGGT
TCAAATCTTTTGATTGACAATAACGGGATCTTGAAGATTGCAGATTTTGGCTTAGCAACC
TTTTTCGATCCGCACCAAAGTGTTCCTTTGACAAGCCGTGTTGTGACTCTTTGGTATCGA
CCACCCGAGCTCTTACTTGGAGCAAGTCACTATGGAGTCGCTGTAGATTTGTGGAGTACT
GGCTGCATACTTGGAGAATTATATGCTGGCAAGCCCATTATGCCTGGAAGAACAGAGGTG
GAGCAGCTGCATAAGATTTTTAAGCTTTGTGGTTCACCATCTGAGAATTATTGGAAAAAA
GAAAAATTACATCATTCAACAGCATTTAAACCGTTACATCCTTACAGACGGCGTCTTGGG
GAAACATTTAAGGATTTTCCTCTATCTGCTGTGAGGTTGATGGACACATTACTTTCTATA
GATCCTGAACTTAGGGGAACAGCTGTCGGTGCTCTGGAGAGTGAGTTCTTCACCACAAGG
CCACTGCCTTGTGATCCTTCAAGTTTGCCAAAGTACCCTCCCAGCAAGGAAATTGATGCA
AAACTGCGGGATGAAGAAGCTCGAAGACAAGGAGCTGCAGGAGTGAAGAACCAATTTGAT
GAAGGGCATATGAGAGGATCAAAAGAACCTCGAGCAGTTCCAGCACCTGATGCTAATGCC
GAGTTGGCGAGGTCAATGCAGAGGAGGCAGAGCAGTTCAAATCCCAAGAGCCGATCTGAG
CACTTCTATCCCTATAAAGAAGCTCCTTGCGGTTTTCCAATTGATCAACATAAACCATTA
CAACCGAGCAAAGAAAAAGGTGGAGATCACTTGGAGAATCATTCAGAGAGATTTTCTCAT
TCAGGACCTCTAGCACCAGGATTTGGGTGGGCAAAATCCGGGAAGAAATATGATCATGAT
ATTTCTGTTGGTTCCAATAGAGCCGACTTATCCAAGTTTTCTACTTTAGTAGCATCTAGG
TCAGTTGTCACTGGTGATGCTCGAGATCGATTTGTTGCTTCACAGGTAGAATCTGGCCGT
CAAGTAGAAAGGCCAGTACGCTTGCTTGACGAACATTCAAGGAAGCAGGATTGGAAGCGT
CAGATGCAAAACCATGCTAGTTCTCGTCAATTTGACAATGGAAGGGCTAGTATTAAAGAA
CAAAATCTGCATGGCCATACCCATGGTCACAAGGGAAACACAATCCATTTCTCAGGTCCA
CTACTTGTTCAACCAAATAAAGTGGATCAAATGCTTAAAGAGCACGATCGTCGTATCCAG
GAAGCTGCACGACGAGCAAGGCTCGAGAAGGCAAGAGCTGGCAAAGGCCAAGCTCAAGGG
ATGCCGAGAACAACCAATTCTTTTTACGTTACTAGTCTGGGATCGCGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400031954
PEP Infomation

pacid=37433168 transcript=PGSC0003DMT400047232 locus=PGSC0003DMG400018337 ID=PGSC0003DMT400047232.v4.03 annot-version=v4.03
Sequence

MGGVCGKPSEPVQNRRDRQKRSEFTKGATVVSRPLRAVSTKREESFRVKDKLENGDVKLG
LVDRKSNGSRKVRDDHYEQIKEKLGLIVNGCPGNGVVPKALEGELIAAGWPSWLASVAGE
AINGWLPRKGDTFERLDKIGQGTYSSVYKARDLINNKLVALKRVRFDNMDIESVKFMARE
IVILRKLDHPNIIKLEGLVASRSSCSLYLVFEYMEHDLTGLASLPDNKFTEPQMKCYMHQ
LLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLATFFDPHQSVPLTSRVVTLWYR
PPELLLGASHYGVAVDLWSTGCILGELYAGKPIMPGRTEVEQLHKIFKLCGSPSENYWKK
EKLHHSTAFKPLHPYRRRLGETFKDFPLSAVRLMDTLLSIDPELRGTAVGALESEFFTTR
PLPCDPSSLPKYPPSKEIDAKLRDEEARRQGAAGVKNQFDEGHMRGSKEPRAVPAPDANA
ELARSMQRRQSSSNPKSRSEHFYPYKEAPCGFPIDQHKPLQPSKEKGGDHLENHSERFSH
SGPLAPGFGWAKSGKKYDHDISVGSNRADLSKFSTLVASRSVVTGDARDRFVASQVESGR
QVERPVRLLDEHSRKQDWKRQMQNHASSRQFDNGRASIKEQNLHGHTHGHKGNTIHFSGP
LLVQPNKVDQMLKEHDRRIQEAARRARLEKARAGKGQAQGMPRTTNSFYVTSLGSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400047232
Transcript Infomation

pacid=37433168 locus=PGSC0003DMG400018337 ID=PGSC0003DMT400047232.v4.03 annot-version=v4.03
Sequence

ATGGGTGGTGTTTGTGGAAAACCTTCCGAGCCCGTGCAGAATAGGCGGGATAGACAAAAG
AGGAGTGAATTTACTAAAGGGGCAACTGTGGTATCACGCCCACTACGAGCTGTTTCTACA
AAGAGAGAGGAAAGTTTCAGGGTGAAAGACAAGTTGGAAAATGGTGATGTGAAGCTTGGT
TTGGTAGATAGGAAGTCTAATGGATCAAGAAAGGTCAGGGATGATCATTATGAGCAGATA
AAGGAAAAGCTTGGACTCATTGTGAATGGTTGTCCTGGAAACGGAGTCGTCCCAAAAGCC
TTGGAAGGGGAGCTGATTGCTGCTGGATGGCCTTCTTGGCTTGCTTCAGTGGCTGGTGAA
GCTATTAATGGATGGCTTCCTCGCAAGGGCGATACATTCGAGAGATTAGACAAGATTGGC
CAAGGGACTTATAGTAGTGTATACAAGGCTCGTGACCTAATTAACAATAAACTTGTTGCA
CTCAAAAGAGTGCGGTTTGATAATATGGATATTGAAAGTGTCAAATTTATGGCAAGGGAG
ATAGTCATTTTGCGTAAGCTTGATCATCCAAATATTATCAAATTGGAAGGCTTGGTTGCA
TCAAGATCATCTTGCAGTTTGTACCTTGTTTTTGAGTACATGGAACATGATCTCACTGGA
CTGGCATCTCTTCCTGATAACAAATTTACCGAACCACAGATGAAATGCTATATGCATCAA
CTTCTTAGTGGACTTGATCATTGCCATAGTCGGGGTGTTTTGCATCGGGACATTAAAGGT
TCAAATCTTTTGATTGACAATAACGGGATCTTGAAGATTGCAGATTTTGGCTTAGCAACC
TTTTTCGATCCGCACCAAAGTGTTCCTTTGACAAGCCGTGTTGTGACTCTTTGGTATCGA
CCACCCGAGCTCTTACTTGGAGCAAGTCACTATGGAGTCGCTGTAGATTTGTGGAGTACT
GGCTGCATACTTGGAGAATTATATGCTGGCAAGCCCATTATGCCTGGAAGAACAGAGGTG
GAGCAGCTGCATAAGATTTTTAAGCTTTGTGGTTCACCATCTGAGAATTATTGGAAAAAA
GAAAAATTACATCATTCAACAGCATTTAAACCGTTACATCCTTACAGACGGCGTCTTGGG
GAAACATTTAAGGATTTTCCTCTATCTGCTGTGAGGTTGATGGACACATTACTTTCTATA
GATCCTGAACTTAGGGGAACAGCTGTCGGTGCTCTGGAGAGTGAGTTCTTCACCACAAGG
CCACTGCCTTGTGATCCTTCAAGTTTGCCAAAGTACCCTCCCAGCAAGGAAATTGATGCA
AAACTGCGGGATGAAGAAGCTCGAAGACAAGGAGCTGCAGGAGTGAAGAACCAATTTGAT
GAAGGGCATATGAGAGGATCAAAAGAACCTCGAGCAGTTCCAGCACCTGATGCTAATGCC
GAGTTGGCGAGGTCAATGCAGAGGAGGCAGAGCAGTTCAAATCCCAAGAGCCGATCTGAG
CACTTCTATCCCTATAAAGAAGCTCCTTGCGGTTTTCCAATTGATCAACATAAACCATTA
CAACCGAGCAAAGAAAAAGGTGGAGATCACTTGGAGAATCATTCAGAGAGATTTTCTCAT
TCAGGACCTCTAGCACCAGGATTTGGGTGGGCAAAATCCGGGAAGAAATATGATCATGAT
ATTTCTGTTGGTTCCAATAGAGCCGACTTATCCAAGTTTTCTACTTTAGTAGCATCTAGG
TCAGTTGTCACTGGTGATGCTCGAGATCGATTTGTTGCTTCACAGGTAGAATCTGGCCGT
CAAGTAGAAAGGCCAGTACGCTTGCTTGACGAACATTCAAGGAAGCAGGATTGGAAGCGT
CAGATGCAAAACCATGCTAGTTCTCGTCAATTTGACAATGGAAGGGCTAGTATTAAAGAA
CAAAATCTGCATGGCCATACCCATGGTCACAAGGGAAACACAATCCATTTCTCAGGTCCA
CTACTTGTTCAACCAAATAAAGTGGATCAAATGCTTAAAGAGCACGATCGTCGTATCCAG
GAAGCTGCACGACGAGCAAGGCTCGAGAAGGCAAGAGCTGGCAAAGGCCAAGCTCAAGGG
ATGCCGAGAACAACCAATTCTTTTTACGTTACTAGTCTGGGATCGCGGTAG