Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047219
CDS Infomation

pacid=37434192 polypeptide=PGSC0003DMP400031943 locus=PGSC0003DMG400018331 ID=PGSC0003DMT400047219.v4.03 annot-version=v4.03
Sequence

ATGGGAAGATCACCATGTTGTGATAAAAATGGACTCAAAAAAGGTCCATGGACTCCAGAA
GAAGATAATAAACTCATCCAATATATTCAACTTCATGGTCCTGGAAATTGGCGAACACTC
CCTAAGAATGCTGGACTTCAAAGGTGTGGAAAGAGTTGTCGTCTTCGTTGGACGAATTAC
TTGAGACCTGATATTAAAAGAGGACGATTCTCATTTGATGAAGAAGAAACTATTATCCAA
CTTCATAGTGTTCTTGGCAACAAATGGTCAGCTATAGCAGCCCGTCTACCAGGGAGAACA
GACAACGAAATCAAGAATTACTGGAACACCCACATTAGAAAAAGGCTTTTAAGGAATGGT
ATTGATCCAGTGACTCATAGTCCTCGTCTTGATTTATTAGACTTATCGTCCCTTCTAAAT
TCGACTCAATTCAACCTATCGAGCTTACTTGGACTACAAGCACTTGTAAACCCTGAAGTC
TTCAGGCTTGCAGCTACTCTTTTGGCATCACAAAATGAAAGTACCCCAGAATTGTTACTA
CAAAAATATCAAGAAAATAATCAGATGTTTAACACTCAAGTACAAAACCAAGAAGGGTCT
GAATTGTTGTTACAAAAGCTTCAACAAAATCAAATATTGAATTCCCAATTGCAAAATCAG
ACTCAATTTTTTCAATTCCAAAATCAGATTCAAGAAATACCAAATTTCACCACACAAAAT
GTTCCTTGTTCATCTTCATTATCACAGCCAATGCAATTAGGACACGTGGAGGAATCCTAT
TTGATGAATGGCCAAATGCTACCTCCACAAAACTATGGTTATTGTAATTCTGATGCTTCT
GATAATTCAAATTTTCAATCACTCAACACCAACAGCAGCACTCAGAATTTCAGCTTAGAT
TCAGTGTTATCGACACCCACGGAAGACGAAAAAGAGAGCTATTGCAGTAATTTGATGAAA
TTCGAAATCCCAGAGAGCTTAAATTTCGATGATTTTATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400031943
PEP Infomation

pacid=37434192 transcript=PGSC0003DMT400047219 locus=PGSC0003DMG400018331 ID=PGSC0003DMT400047219.v4.03 annot-version=v4.03
Sequence

MGRSPCCDKNGLKKGPWTPEEDNKLIQYIQLHGPGNWRTLPKNAGLQRCGKSCRLRWTNY
LRPDIKRGRFSFDEEETIIQLHSVLGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRNG
IDPVTHSPRLDLLDLSSLLNSTQFNLSSLLGLQALVNPEVFRLAATLLASQNESTPELLL
QKYQENNQMFNTQVQNQEGSELLLQKLQQNQILNSQLQNQTQFFQFQNQIQEIPNFTTQN
VPCSSSLSQPMQLGHVEESYLMNGQMLPPQNYGYCNSDASDNSNFQSLNTNSSTQNFSLD
SVLSTPTEDEKESYCSNLMKFEIPESLNFDDFM*

Transcript Sequence

Transcript ID

PGSC0003DMT400047219
Transcript Infomation

pacid=37434192 locus=PGSC0003DMG400018331 ID=PGSC0003DMT400047219.v4.03 annot-version=v4.03
Sequence

ATGGGAAGATCACCATGTTGTGATAAAAATGGACTCAAAAAAGGTCCATGGACTCCAGAA
GAAGATAATAAACTCATCCAATATATTCAACTTCATGGTCCTGGAAATTGGCGAACACTC
CCTAAGAATGCTGGACTTCAAAGGTGTGGAAAGAGTTGTCGTCTTCGTTGGACGAATTAC
TTGAGACCTGATATTAAAAGAGGACGATTCTCATTTGATGAAGAAGAAACTATTATCCAA
CTTCATAGTGTTCTTGGCAACAAATGGTCAGCTATAGCAGCCCGTCTACCAGGGAGAACA
GACAACGAAATCAAGAATTACTGGAACACCCACATTAGAAAAAGGCTTTTAAGGAATGGT
ATTGATCCAGTGACTCATAGTCCTCGTCTTGATTTATTAGACTTATCGTCCCTTCTAAAT
TCGACTCAATTCAACCTATCGAGCTTACTTGGACTACAAGCACTTGTAAACCCTGAAGTC
TTCAGGCTTGCAGCTACTCTTTTGGCATCACAAAATGAAAGTACCCCAGAATTGTTACTA
CAAAAATATCAAGAAAATAATCAGATGTTTAACACTCAAGTACAAAACCAAGAAGGGTCT
GAATTGTTGTTACAAAAGCTTCAACAAAATCAAATATTGAATTCCCAATTGCAAAATCAG
ACTCAATTTTTTCAATTCCAAAATCAGATTCAAGAAATACCAAATTTCACCACACAAAAT
GTTCCTTGTTCATCTTCATTATCACAGCCAATGCAATTAGGACACGTGGAGGAATCCTAT
TTGATGAATGGCCAAATGCTACCTCCACAAAACTATGGTTATTGTAATTCTGATGCTTCT
GATAATTCAAATTTTCAATCACTCAACACCAACAGCAGCACTCAGAATTTCAGCTTAGAT
TCAGTGTTATCGACACCCACGGAAGACGAAAAAGAGAGCTATTGCAGTAATTTGATGAAA
TTCGAAATCCCAGAGAGCTTAAATTTCGATGATTTTATGTAA