Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047208
CDS Infomation

pacid=37434300 polypeptide=PGSC0003DMP400031935 locus=PGSC0003DMG400018323 ID=PGSC0003DMT400047208.v4.03 annot-version=v4.03
Sequence

ATGAATTCCCGTTTCACATCTCTCGTTTCCCGATCACTCAAATCCAATCGCCACCACTAT
CTCTTACCTCAATTATTCTCTTCTTCCACCGCCACACCAGCATCTCCACCACAATACCCT
CAAACCCTTGAGGGATTACGCCACCGGTTAGCGGCGGAGTCACCGACGTTATCCGATTTC
ACTAGACTTCAATCGGATAAAGAGTATTCGGTTGAGGTAGGGACGAAGAAGAAGCCGCTT
CCTAAACCGAAATGGATGAAGGAAGCTATACCTGGAGGAGAGAAATACACACAGATCAAG
AAGAAATTGAGGGAATTGAAGCTTCATACTGTTTGTGAAGAGGCGAAATGCCCTAATTTG
GGAGAGTGCTGGTCCGGTGGTGAAACTGGTACAGCTACCGCTACCATCATGATTCTAGGT
GATACTTGTACCAGAGGTTGCAGATTCTGCAATGTGAAGACATCACGCACTCCACCTCCT
CCTGACCCAAATGAACCTGCCAATGTGGCTGAGGCCATTGCTTCATGGGGATTAGATTAC
ATTGTGATCACTAGTGTTGACCGTGATGATTTGCCTGATCAAGGAAGTGGTCATTTCACT
GAGACAGTGCAGAAGTTGAAGGCATTGAAGCCACATATACTCATAGAAGCACTGACTCCA
GATTTTCGAGGTGATCCTGGGTGTGTAGAGAAAGTTGCGAAATCTGGATTAGATGTTTTT
GCTCATAACATTGAAACCGTTGAAGAGCTTCAGAGTGTAGTACGAGATCATCGTGCTAAC
TTCAAGCAGTCCATGGACGTTCTGAAGATGGCCAAGGAGTATGCCCCTGCTGGGACATTG
ACAAAGACTTCAATAATGTTGGGCTGTGGGGAAACCCCCGAACAAGTTGTTAGAACAATG
GAAAAAGTGCGTGCTGCGGGTGTTGATGTAATGACATTTGGCCAGTACATGAGACCATCA
AAGCGTCACATGCCTGTTACTGAATACATAACCCCTGAAGCCTTTGAGAATTATCAAGTT
CTCGGCACACAAATGGGATTTCGATATGTGGCTTCTGGCCCCATGGTTAGGTCGTCCTAC
AAGGCAGGGGAATTCTATATTAAATCCATGATAGAATCTGATCGTGCAGCATCCTCGTCT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400031935
PEP Infomation

pacid=37434300 transcript=PGSC0003DMT400047208 locus=PGSC0003DMG400018323 ID=PGSC0003DMT400047208.v4.03 annot-version=v4.03
Sequence

MNSRFTSLVSRSLKSNRHHYLLPQLFSSSTATPASPPQYPQTLEGLRHRLAAESPTLSDF
TRLQSDKEYSVEVGTKKKPLPKPKWMKEAIPGGEKYTQIKKKLRELKLHTVCEEAKCPNL
GECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPANVAEAIASWGLDY
IVITSVDRDDLPDQGSGHFTETVQKLKALKPHILIEALTPDFRGDPGCVEKVAKSGLDVF
AHNIETVEELQSVVRDHRANFKQSMDVLKMAKEYAPAGTLTKTSIMLGCGETPEQVVRTM
EKVRAAGVDVMTFGQYMRPSKRHMPVTEYITPEAFENYQVLGTQMGFRYVASGPMVRSSY
KAGEFYIKSMIESDRAASSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400047208
Transcript Infomation

pacid=37434300 locus=PGSC0003DMG400018323 ID=PGSC0003DMT400047208.v4.03 annot-version=v4.03
Sequence

ATGAATTCCCGTTTCACATCTCTCGTTTCCCGATCACTCAAATCCAATCGCCACCACTAT
CTCTTACCTCAATTATTCTCTTCTTCCACCGCCACACCAGCATCTCCACCACAATACCCT
CAAACCCTTGAGGGATTACGCCACCGGTTAGCGGCGGAGTCACCGACGTTATCCGATTTC
ACTAGACTTCAATCGGATAAAGAGTATTCGGTTGAGGTAGGGACGAAGAAGAAGCCGCTT
CCTAAACCGAAATGGATGAAGGAAGCTATACCTGGAGGAGAGAAATACACACAGATCAAG
AAGAAATTGAGGGAATTGAAGCTTCATACTGTTTGTGAAGAGGCGAAATGCCCTAATTTG
GGAGAGTGCTGGTCCGGTGGTGAAACTGGTACAGCTACCGCTACCATCATGATTCTAGGT
GATACTTGTACCAGAGGTTGCAGATTCTGCAATGTGAAGACATCACGCACTCCACCTCCT
CCTGACCCAAATGAACCTGCCAATGTGGCTGAGGCCATTGCTTCATGGGGATTAGATTAC
ATTGTGATCACTAGTGTTGACCGTGATGATTTGCCTGATCAAGGAAGTGGTCATTTCACT
GAGACAGTGCAGAAGTTGAAGGCATTGAAGCCACATATACTCATAGAAGCACTGACTCCA
GATTTTCGAGGTGATCCTGGGTGTGTAGAGAAAGTTGCGAAATCTGGATTAGATGTTTTT
GCTCATAACATTGAAACCGTTGAAGAGCTTCAGAGTGTAGTACGAGATCATCGTGCTAAC
TTCAAGCAGTCCATGGACGTTCTGAAGATGGCCAAGGAGTATGCCCCTGCTGGGACATTG
ACAAAGACTTCAATAATGTTGGGCTGTGGGGAAACCCCCGAACAAGTTGTTAGAACAATG
GAAAAAGTGCGTGCTGCGGGTGTTGATGTAATGACATTTGGCCAGTACATGAGACCATCA
AAGCGTCACATGCCTGTTACTGAATACATAACCCCTGAAGCCTTTGAGAATTATCAAGTT
CTCGGCACACAAATGGGATTTCGATATGTGGCTTCTGGCCCCATGGTTAGGTCGTCCTAC
AAGGCAGGGGAATTCTATATTAAATCCATGATAGAATCTGATCGTGCAGCATCCTCGTCT
TAA