Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047186
CDS Infomation

pacid=37432491 polypeptide=PGSC0003DMP400031918 locus=PGSC0003DMG400018317 ID=PGSC0003DMT400047186.v4.03 annot-version=v4.03
Sequence

ATGAATATGTATGCAAAACAAAGAAGTTGTGTTTTGAATGAAGACCGCTTGAGCGGACTA
CCAGATGACATCCTCATCCATATTCTCTCCTTATTGCCATTAAAGGATGCTGTCAAAGGA
ATCTGTAACGCAAGTAGAAGATTTCATAAGCTCTGGCCATTCATCCACACACTCAATTTT
GATCAATACATGTTTCCAGAACATGACTGTGACTATTATTTGGAAGCTGGTCGTCCTGAC
TACGACGAAAGGTTTGTGCACTCCGTTCGTCACGTGCTTCTTCGTAGTAAAAGTCCAACT
ATTCATAAGTTCTGCCTTAAGTTTCATTTTAGATTGTCTTATTCATTTTGGCAAAGAACA
TCCAACAGCACAGGCATATGGCAGTACTATGATTTCCTGAGGAGTGAGAAAAGGATGGCT
AATGAAATTGGTACCTGGATCCAGTTCGCATTAAATAAGAATTTGGAGGTCCTTGACTTG
TCTTTCTCTGAGCATGGTACAGTTGGGCCACAGGCTCTTTATGATCTGCCTAATTGTGTT
CTAAGCAGTCCTCATTTGGTTGAACTCTGGTTGACACACTGTACGATAAATGCAAAAAAG
AAAAGTAAGCTGAAGTCTCTAAAAACATTATATCTTAATAATGTTGTGCTAATGGATCAA
TCGATGGATTATATTCTATCTGGTTGCCCGATGCTTGAGGAATTGACATTGCAGCTTTGC
TATGGCCATATAAGAGTGGTTCTACTCAATTCAAATTTAAAGACATTGAAGCTTGACATT
GGATGGTTTCGACAAAGGATACATGTCTCCTGTCCAACTCTCCTATCATTAGATATGTCT
GGAGCTGTGGAGGTGCTGGATATTGCAAATGTAGCATCTATTGCTGAAGTGTCTGTCAAT
CGCAATCTGATATTTGATTTCGATGTGTACAAGGATTACCAAGGGATCAAAACATTCCTC
CAAACATTTACCGGGGCCAAAACTCTCAATCTATGTTCCTGGTTTGCTCTGGTATTTTCT
GCGTGGCAGTTGAAAAATCTACCATCTCCAACCTTCAGCTGCAAATCCCTTCATCTTCAA
TTAGATTTTATGATATGGAATCTACCAGGAATACTGAACTTGCTGAAGCACTGTCCTTGC
TTGGAGAATCTTATCATCAAAATTACTTCTTCTTACAATGAATTTACATCCCAAAAACAA
CTATCGTGGTATCACCTATATAAGTTTGACGCGGATGAATACTGGAACATGGTAGATGCT
CCTGTCCAGTGCATGATTCATCACCTCAAGACGGTGGAGGTAGCTGGTCTCATAAAGAAG
AAATTTGTGATTCAGTTTTTGGAATATTTGCTCAGGCATTCCATGGTGTTAAAGAAAATG
AAGATATTTGCAAAGAAAAAAACCTCTAAAATTTGTGAATATGAAGAGAGGCTATTGAAT
GCACCAAAAGCCTCTGCCTCTGCTGCAGTGCTCTTCTACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400031918
PEP Infomation

pacid=37432491 transcript=PGSC0003DMT400047186 locus=PGSC0003DMG400018317 ID=PGSC0003DMT400047186.v4.03 annot-version=v4.03
Sequence

MNMYAKQRSCVLNEDRLSGLPDDILIHILSLLPLKDAVKGICNASRRFHKLWPFIHTLNF
DQYMFPEHDCDYYLEAGRPDYDERFVHSVRHVLLRSKSPTIHKFCLKFHFRLSYSFWQRT
SNSTGIWQYYDFLRSEKRMANEIGTWIQFALNKNLEVLDLSFSEHGTVGPQALYDLPNCV
LSSPHLVELWLTHCTINAKKKSKLKSLKTLYLNNVVLMDQSMDYILSGCPMLEELTLQLC
YGHIRVVLLNSNLKTLKLDIGWFRQRIHVSCPTLLSLDMSGAVEVLDIANVASIAEVSVN
RNLIFDFDVYKDYQGIKTFLQTFTGAKTLNLCSWFALVFSAWQLKNLPSPTFSCKSLHLQ
LDFMIWNLPGILNLLKHCPCLENLIIKITSSYNEFTSQKQLSWYHLYKFDADEYWNMVDA
PVQCMIHHLKTVEVAGLIKKKFVIQFLEYLLRHSMVLKKMKIFAKKKTSKICEYEERLLN
APKASASAAVLFY*

Transcript Sequence

Transcript ID

PGSC0003DMT400047186
Transcript Infomation

pacid=37432491 locus=PGSC0003DMG400018317 ID=PGSC0003DMT400047186.v4.03 annot-version=v4.03
Sequence

ATGAATATGTATGCAAAACAAAGAAGTTGTGTTTTGAATGAAGACCGCTTGAGCGGACTA
CCAGATGACATCCTCATCCATATTCTCTCCTTATTGCCATTAAAGGATGCTGTCAAAGGA
ATCTGTAACGCAAGTAGAAGATTTCATAAGCTCTGGCCATTCATCCACACACTCAATTTT
GATCAATACATGTTTCCAGAACATGACTGTGACTATTATTTGGAAGCTGGTCGTCCTGAC
TACGACGAAAGGTTTGTGCACTCCGTTCGTCACGTGCTTCTTCGTAGTAAAAGTCCAACT
ATTCATAAGTTCTGCCTTAAGTTTCATTTTAGATTGTCTTATTCATTTTGGCAAAGAACA
TCCAACAGCACAGGCATATGGCAGTACTATGATTTCCTGAGGAGTGAGAAAAGGATGGCT
AATGAAATTGGTACCTGGATCCAGTTCGCATTAAATAAGAATTTGGAGGTCCTTGACTTG
TCTTTCTCTGAGCATGGTACAGTTGGGCCACAGGCTCTTTATGATCTGCCTAATTGTGTT
CTAAGCAGTCCTCATTTGGTTGAACTCTGGTTGACACACTGTACGATAAATGCAAAAAAG
AAAAGTAAGCTGAAGTCTCTAAAAACATTATATCTTAATAATGTTGTGCTAATGGATCAA
TCGATGGATTATATTCTATCTGGTTGCCCGATGCTTGAGGAATTGACATTGCAGCTTTGC
TATGGCCATATAAGAGTGGTTCTACTCAATTCAAATTTAAAGACATTGAAGCTTGACATT
GGATGGTTTCGACAAAGGATACATGTCTCCTGTCCAACTCTCCTATCATTAGATATGTCT
GGAGCTGTGGAGGTGCTGGATATTGCAAATGTAGCATCTATTGCTGAAGTGTCTGTCAAT
CGCAATCTGATATTTGATTTCGATGTGTACAAGGATTACCAAGGGATCAAAACATTCCTC
CAAACATTTACCGGGGCCAAAACTCTCAATCTATGTTCCTGGTTTGCTCTGGTATTTTCT
GCGTGGCAGTTGAAAAATCTACCATCTCCAACCTTCAGCTGCAAATCCCTTCATCTTCAA
TTAGATTTTATGATATGGAATCTACCAGGAATACTGAACTTGCTGAAGCACTGTCCTTGC
TTGGAGAATCTTATCATCAAAATTACTTCTTCTTACAATGAATTTACATCCCAAAAACAA
CTATCGTGGTATCACCTATATAAGTTTGACGCGGATGAATACTGGAACATGGTAGATGCT
CCTGTCCAGTGCATGATTCATCACCTCAAGACGGTGGAGGTAGCTGGTCTCATAAAGAAG
AAATTTGTGATTCAGTTTTTGGAATATTTGCTCAGGCATTCCATGGTGTTAAAGAAAATG
AAGATATTTGCAAAGAAAAAAACCTCTAAAATTTGTGAATATGAAGAGAGGCTATTGAAT
GCACCAAAAGCCTCTGCCTCTGCTGCAGTGCTCTTCTACTGA