Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047166
CDS Infomation

pacid=37431026 polypeptide=PGSC0003DMP400031900 locus=PGSC0003DMG400018305 ID=PGSC0003DMT400047166.v4.03 annot-version=v4.03
Sequence

ATGGACGTTGAAATCGAAGAAATTTCTGCTCATGATGATTCTGTGAAGGTTAAAGGCAAT
AAGGAGGCTATGACTGAGGATAATCCAGATACTGTAGCTGGGTCCACATCTGGATCTATT
GACTCTGGCAATAACAACAGTTCCAATTCAGACATATCACACCATGAAGATCAGAATGAT
GGAGATGATGGGTTAGATGATTGTGATGATATGTCAAACTATGATGATGATGAGGACTAT
ATGTATTATGATGATGAGGACGATGAATGTGATTACTTGAGTATGCAGGCACAATTTGAT
AATGTTGATTTGCCCGCTGGTGTTGAGGCAACAGTTTCTTGGTTAAATGAACCTGCTCCT
AGTTCAAAAGTGTCTTCCCAAGCTAGCTCTTCGAGTCATCTAGCAGGTGCTCAGACATTG
AATCCTACACTTCCTGAGCATGCAAGTAGTAGCTTTGCTCAGGTCCCTGCTTCAAGCAAT
TCTTTGGTGTCTGGAGGGTCAAATTCCTGTGGGAAGGAAGAGGTAACTGAAGATGAACTC
ATGAAAAAGTATCAAAGTTTTAAGCATTTTGATGTGGTAGAGGACTTCTCAGATCATCAT
TACAGTAACTTGGGCGTCAAGGGACAACAGCCACCTAAGGCCTGGAGTAAGAAAGTTCAG
GATGAGTGGAAAATATTGGAAAATGATTTACCTGATACAATATATGTAAGGGTCTACGAA
GCAAGAATGGATCTCCTTAGGGCTGTCATCATTGGGCCACAAGGCACTCCATACCATGAT
GGTCTCTTTGTCTTTGATGTCCTGTTCCCTCAAAATTACCCTGATGTGCCACCAATGGTT
TACTACTATTCTGGCGGTTTGAGACTGAATCCCAACTTGTATGATTGTGGAAAAGTCTGT
CTCAGTCTTCTGAACACTTGGACTGGTAAAGGTAACGAGAGGTGGATGCCCAATTCATCG
ACCATGCTGCAAGTCTTGGTTTCCATACAAGCTCTAATTTTGAATTCAAAGCCTTTCTTT
AATGAGCCTGGATATGAAGCTTCATATGCTGGACCTGAGGGACAGAGGAGATCTAACTCT
TACAATGAAGATGCTTTTGTTCTATCTTTGAAAACAATGACATATACGTTGAGGAGGCCA
CCAAAGCATTTTGAAGACCTTGTCATAGGTCATTTCCGTTGCCATGCTGTAGACATTCTT
TCTGCATGCAAGGCATATATAGAAGGAGCTCCAGTTGGTTCTGTGGTCAAGGGAATAGTC
CAGGATCTTAGTGTAACTGCAGAGAAGAGCTCATCAACATTCAGAGAATCAGTATCCAGA
ATGAAGAATGGTCTTATATCCCTTTTCACTAAGAATGGTGCCAATGATTGTGACCGGTTT
CGTGCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400031900
PEP Infomation

pacid=37431026 transcript=PGSC0003DMT400047166 locus=PGSC0003DMG400018305 ID=PGSC0003DMT400047166.v4.03 annot-version=v4.03
Sequence

MDVEIEEISAHDDSVKVKGNKEAMTEDNPDTVAGSTSGSIDSGNNNSSNSDISHHEDQND
GDDGLDDCDDMSNYDDDEDYMYYDDEDDECDYLSMQAQFDNVDLPAGVEATVSWLNEPAP
SSKVSSQASSSSHLAGAQTLNPTLPEHASSSFAQVPASSNSLVSGGSNSCGKEEVTEDEL
MKKYQSFKHFDVVEDFSDHHYSNLGVKGQQPPKAWSKKVQDEWKILENDLPDTIYVRVYE
ARMDLLRAVIIGPQGTPYHDGLFVFDVLFPQNYPDVPPMVYYYSGGLRLNPNLYDCGKVC
LSLLNTWTGKGNERWMPNSSTMLQVLVSIQALILNSKPFFNEPGYEASYAGPEGQRRSNS
YNEDAFVLSLKTMTYTLRRPPKHFEDLVIGHFRCHAVDILSACKAYIEGAPVGSVVKGIV
QDLSVTAEKSSSTFRESVSRMKNGLISLFTKNGANDCDRFRA*

Transcript Sequence

Transcript ID

PGSC0003DMT400047166
Transcript Infomation

pacid=37431026 locus=PGSC0003DMG400018305 ID=PGSC0003DMT400047166.v4.03 annot-version=v4.03
Sequence

ATGGACGTTGAAATCGAAGAAATTTCTGCTCATGATGATTCTGTGAAGGTTAAAGGCAAT
AAGGAGGCTATGACTGAGGATAATCCAGATACTGTAGCTGGGTCCACATCTGGATCTATT
GACTCTGGCAATAACAACAGTTCCAATTCAGACATATCACACCATGAAGATCAGAATGAT
GGAGATGATGGGTTAGATGATTGTGATGATATGTCAAACTATGATGATGATGAGGACTAT
ATGTATTATGATGATGAGGACGATGAATGTGATTACTTGAGTATGCAGGCACAATTTGAT
AATGTTGATTTGCCCGCTGGTGTTGAGGCAACAGTTTCTTGGTTAAATGAACCTGCTCCT
AGTTCAAAAGTGTCTTCCCAAGCTAGCTCTTCGAGTCATCTAGCAGGTGCTCAGACATTG
AATCCTACACTTCCTGAGCATGCAAGTAGTAGCTTTGCTCAGGTCCCTGCTTCAAGCAAT
TCTTTGGTGTCTGGAGGGTCAAATTCCTGTGGGAAGGAAGAGGTAACTGAAGATGAACTC
ATGAAAAAGTATCAAAGTTTTAAGCATTTTGATGTGGTAGAGGACTTCTCAGATCATCAT
TACAGTAACTTGGGCGTCAAGGGACAACAGCCACCTAAGGCCTGGAGTAAGAAAGTTCAG
GATGAGTGGAAAATATTGGAAAATGATTTACCTGATACAATATATGTAAGGGTCTACGAA
GCAAGAATGGATCTCCTTAGGGCTGTCATCATTGGGCCACAAGGCACTCCATACCATGAT
GGTCTCTTTGTCTTTGATGTCCTGTTCCCTCAAAATTACCCTGATGTGCCACCAATGGTT
TACTACTATTCTGGCGGTTTGAGACTGAATCCCAACTTGTATGATTGTGGAAAAGTCTGT
CTCAGTCTTCTGAACACTTGGACTGGTAAAGGTAACGAGAGGTGGATGCCCAATTCATCG
ACCATGCTGCAAGTCTTGGTTTCCATACAAGCTCTAATTTTGAATTCAAAGCCTTTCTTT
AATGAGCCTGGATATGAAGCTTCATATGCTGGACCTGAGGGACAGAGGAGATCTAACTCT
TACAATGAAGATGCTTTTGTTCTATCTTTGAAAACAATGACATATACGTTGAGGAGGCCA
CCAAAGCATTTTGAAGACCTTGTCATAGGTCATTTCCGTTGCCATGCTGTAGACATTCTT
TCTGCATGCAAGGCATATATAGAAGGAGCTCCAGTTGGTTCTGTGGTCAAGGGAATAGTC
CAGGATCTTAGTGTAACTGCAGAGAAGAGCTCATCAACATTCAGAGAATCAGTATCCAGA
ATGAAGAATGGTCTTATATCCCTTTTCACTAAGAATGGTGCCAATGATTGTGACCGGTTT
CGTGCCTAA