Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047154
CDS Infomation

pacid=37436640 polypeptide=PGSC0003DMP400031893 locus=PGSC0003DMG403018293 ID=PGSC0003DMT400047154.v4.03 annot-version=v4.03
Sequence

ATGGCGAGGAAGAAGATCAGAGAGTATGATTCAAAGAGGCTTCTAAAGGAGCATTTGAAA
CGCCTTGCTGGCATCGATCTTCAGATCTGCTCTGCTCAAGTGACAGAATCTACAGATTTT
ACCGAGTTAACAAACAAAGAACCATGGCTTTCGTCGACAAAGCTGGTTGTAAAACCAGAC
ATGCTGTTTGGTAAGCGTGGAAAGAGTGGCTTGGTAGCTTTGAATCTGGATCTAGCAGGA
GTTGCTGAGTTTGTAAAAACACGACTTGGTGTGGAGGTTGAAATGGGTGGCTGCAAGGCA
CCTATAACAACATTTATTGTTGAACCATTTATTCCCCATGACCAAGAATATTACCTTTCC
ATAGTCTCTGAAAGGTTGGGGTGCACAATTAGCTTTTCAGAATGTGGAGGCATTGAGATT
GAAGAGAACTGGGACAAGGTCAAGACTATATTCCTTCCAACAGAGAAACCTATGACCCTA
GAGGCGTGTGCTCCACTGATTGCTACTCTCCCCTTGGAGGTACGGGGAAAGATTGGCAAT
TTCCTTATGGGTGTTTTTGATGTGTTTCAAGATCTCGATTTTAGTTTCATAGAGATGAAC
CCATTTACGCTTGTAAATGGGGAGCCTTACCCATTGGATATGAGGGGAGAGTTGGATGAC
ACAGCAGCCTTCAAAAATTTTAAGAAGTGGGGAAGCATCGAGTTTCCTCTGCCCTTTGGA
AGAGTTTTGAGCCCTACCGAAAGCTTCATTCACTCTTTGGATGAGAAAACTAGTGCCTCT
TTAAAATTTACAGTTTTGAACCCAAAAGGTCGTATCTGGACAATGGTGGCTGGAGGTGGT
GCAAGCGTTATATATGCTGATACAGTAGGGGATTTAGGCTATGCCTCTGAGCTTGGTAAC
TATGCCGAGTATAGTGGAGCTCCAAATGAAGAGGAGGTTTTGCAATATGCTCGAGTAGTT
CTAGATTGTGCTACTGCTAATCCTGATGGCCGTAAGAGAGCTCTGATTGTTGGAGGTGGT
ATTGCTAACTTCACTGATGTAGCTGCTACTTTCAATGGGATTATTCGGGCTCTCAGGGAG
AAGGAAGCCAAGCTAAAAGCGGCTAGAATGCATATCTATGTACGAAGAGGTGGTCCAAAT
TATCAGACTGGTCTAGCAAAAATGCGCGCCCTAGGAGAGGAACTTGGAGTTCCCCTTGAG
GTTTATGGACCAGAGGCTACAATGACTGGAATTTGCAAAGGGGCAATTGATTGCATTATG
TCTGAAGCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400031893
PEP Infomation

pacid=37436640 transcript=PGSC0003DMT400047154 locus=PGSC0003DMG403018293 ID=PGSC0003DMT400047154.v4.03 annot-version=v4.03
Sequence

MARKKIREYDSKRLLKEHLKRLAGIDLQICSAQVTESTDFTELTNKEPWLSSTKLVVKPD
MLFGKRGKSGLVALNLDLAGVAEFVKTRLGVEVEMGGCKAPITTFIVEPFIPHDQEYYLS
IVSERLGCTISFSECGGIEIEENWDKVKTIFLPTEKPMTLEACAPLIATLPLEVRGKIGN
FLMGVFDVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWGSIEFPLPFG
RVLSPTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
YAEYSGAPNEEEVLQYARVVLDCATANPDGRKRALIVGGGIANFTDVAATFNGIIRALRE
KEAKLKAARMHIYVRRGGPNYQTGLAKMRALGEELGVPLEVYGPEATMTGICKGAIDCIM
SEA*

Transcript Sequence

Transcript ID

PGSC0003DMT400047154
Transcript Infomation

pacid=37436640 locus=PGSC0003DMG403018293 ID=PGSC0003DMT400047154.v4.03 annot-version=v4.03
Sequence

ATGGCGAGGAAGAAGATCAGAGAGTATGATTCAAAGAGGCTTCTAAAGGAGCATTTGAAA
CGCCTTGCTGGCATCGATCTTCAGATCTGCTCTGCTCAAGTGACAGAATCTACAGATTTT
ACCGAGTTAACAAACAAAGAACCATGGCTTTCGTCGACAAAGCTGGTTGTAAAACCAGAC
ATGCTGTTTGGTAAGCGTGGAAAGAGTGGCTTGGTAGCTTTGAATCTGGATCTAGCAGGA
GTTGCTGAGTTTGTAAAAACACGACTTGGTGTGGAGGTTGAAATGGGTGGCTGCAAGGCA
CCTATAACAACATTTATTGTTGAACCATTTATTCCCCATGACCAAGAATATTACCTTTCC
ATAGTCTCTGAAAGGTTGGGGTGCACAATTAGCTTTTCAGAATGTGGAGGCATTGAGATT
GAAGAGAACTGGGACAAGGTCAAGACTATATTCCTTCCAACAGAGAAACCTATGACCCTA
GAGGCGTGTGCTCCACTGATTGCTACTCTCCCCTTGGAGGTACGGGGAAAGATTGGCAAT
TTCCTTATGGGTGTTTTTGATGTGTTTCAAGATCTCGATTTTAGTTTCATAGAGATGAAC
CCATTTACGCTTGTAAATGGGGAGCCTTACCCATTGGATATGAGGGGAGAGTTGGATGAC
ACAGCAGCCTTCAAAAATTTTAAGAAGTGGGGAAGCATCGAGTTTCCTCTGCCCTTTGGA
AGAGTTTTGAGCCCTACCGAAAGCTTCATTCACTCTTTGGATGAGAAAACTAGTGCCTCT
TTAAAATTTACAGTTTTGAACCCAAAAGGTCGTATCTGGACAATGGTGGCTGGAGGTGGT
GCAAGCGTTATATATGCTGATACAGTAGGGGATTTAGGCTATGCCTCTGAGCTTGGTAAC
TATGCCGAGTATAGTGGAGCTCCAAATGAAGAGGAGGTTTTGCAATATGCTCGAGTAGTT
CTAGATTGTGCTACTGCTAATCCTGATGGCCGTAAGAGAGCTCTGATTGTTGGAGGTGGT
ATTGCTAACTTCACTGATGTAGCTGCTACTTTCAATGGGATTATTCGGGCTCTCAGGGAG
AAGGAAGCCAAGCTAAAAGCGGCTAGAATGCATATCTATGTACGAAGAGGTGGTCCAAAT
TATCAGACTGGTCTAGCAAAAATGCGCGCCCTAGGAGAGGAACTTGGAGTTCCCCTTGAG
GTTTATGGACCAGAGGCTACAATGACTGGAATTTGCAAAGGGGCAATTGATTGCATTATG
TCTGAAGCGTAA